TBLASTN 2.2.13 [Nov-27-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= seed10.Q7Q7W5_ANOGA/74-151
         (78 letters)

Database: D.discoideum_AX4/genome.fa 
           6 sequences; 33,943,072 total letters

Searching......done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|93569114|gb|CM000150.2| Dictyostelium discoideum AX4 chromoso...    28   1.4  
gi|93569092|gb|CM000152.2| Dictyostelium discoideum AX4 chromoso...    25   7.1  

>gi|93569114|gb|CM000150.2| Dictyostelium discoideum AX4 chromosome 1, whole
               genome shotgun sequence
          Length = 4923596

 Score = 27.7 bits (60), Expect = 1.4
 Identities = 13/41 (31%), Positives = 24/41 (58%), Gaps = 3/41 (7%)
 Frame = -2

Query: 13      GAYPQIQAFIKS---DRPAKFPNLTIKYVRGLDPIVKLMDE 50
               G+YPQ+Q  +KS    +  KF +L IK +  +D  ++  ++
Sbjct: 2098672 GSYPQLQCIVKSLIESQSFKFDSLVIKLLVSIDNTLRFSND 2098550


>gi|93569092|gb|CM000152.2| Dictyostelium discoideum AX4 chromosome 3, whole
               genome shotgun sequence
          Length = 6357299

 Score = 25.4 bits (54), Expect = 7.1
 Identities = 11/34 (32%), Positives = 20/34 (58%)
 Frame = -2

Query: 12      FGAYPQIQAFIKSDRPAKFPNLTIKYVRGLDPIV 45
               F  YP++ A + +D P+    +TI+ +  L P+V
Sbjct: 6338155 FSVYPKL*AVLNNDSPSLQMKITIEPIFVLSPLV 6338054


  Database: D.discoideum_AX4/genome.fa
    Posted date:  Nov 21, 2011  7:46 PM
  Number of letters in database: 33,943,072
  Number of sequences in database:  6
  
Lambda     K      H
   0.320    0.136    0.408 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,443,258
Number of Sequences: 6
Number of extensions: 20448
Number of successful extensions: 73
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 67
Number of HSP's gapped (non-prelim): 21
length of query: 78
length of database: 11,314,357
effective HSP length: 53
effective length of query: 25
effective length of database: 11,314,039
effective search space: 282850975
effective search space used: 282850975
frameshift window, decay const: 40,  0.1
T: 13
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 53 (25.0 bits)