genewise output
Score 21.62 bits over entire alignment
Scores as bits over a synchronous coding model

Warning: The bits scores is not probablistically correct for single seqs
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gi|111119003|re   54 RLRALRQRQLDQAEAVLEPDVVVKRQEALAAARL-RMQEDLNAQVEKHK 
                     +++  R+R+ D+ + + E + + +++E    A + RM++D  A+ +K + 
                     KMKRARKRKQDEQKRIAEEEELKRKEEEDGRAEVERMKKDA-ARRKKEE 
scaffold_6:sub-10356 aaacgcacacggcaaagggggtaaagggggaggggcaaagg gacaagg 
                     atagcgagaaaaaagtcaaaatagaaaaaggcatagtaaac cggaaaa 
                     agaattaaaacgggattaaaaaaagagattgcaaatgggta taaggag 


gi|111119003|re  102 EKLRQLEEEKRRQKIE                                  
                     E+  +L+ E  R   E                                  
                     EEASRLKAEADRMDAE                                  
scaffold_6:sub-10212 gggaccaggggcaggg                                  
                     aacggtacacagtaca                                  
                     aatcttacaatagtta                                  


//
>scaffold_6:subseq(400495,20000).pep
KMKRARKRKQDEQKRIAEEEELKRKEEEDGRAEVERMKKDAARRKKEEEEASRLKAEADR
MDAE
//
>scaffold_6:subseq(400495,20000).[10356:10163].sp
AAAATGAAACGAGCTCGTAAACGAAAACAAGACGAGCAGAAGAGAATTGCTGAAGAAGAA
GAATTAAAAAGAAAGGAAGAGGAAGATGGTAGGGCCGAAGTAGAACGTATGAAGAAGGAT
GCAGCTAGACGAAAGAAGGAAGAGGAAGAAGCTAGCCGTCTTAAAGCCGAAGCAGATCGA
ATGGATGCTGAA
//
scaffold_6:subseq(400495,20000)	GeneWise	match	10356	10165	21.62	-	.	scaffold_6:subseq(400495,20000)-genewise-prediction-1
scaffold_6:subseq(400495,20000)	GeneWise	cds	10356	10165	0.00	-	0	scaffold_6:subseq(400495,20000)-genewise-prediction-1
//