genewise output
Score 39.53 bits over entire alignment
Scores as bits over a synchronous coding model

Warning: The bits scores is not probablistically correct for single seqs
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seed9complete.g    5 AIFLLLALSCQQIQAELTAADCRSLGFIKAQLMCSSCEKLDDFGL-DTI 
                     A +L + ++   + A  T ADC  LGF K  + C  C KL      D + 
                     AALLSVVIALPSMPAPETVADCLGLGFEKDVVSCRLCAKLLLVTQNDEL 
contig_27:subse10000 ggccaggagcctacgcgagggtcgcgtgagggatcctgacccgacaggc 
                     ccttgtttctcctcccactcagtgtgtaaattgggtgcattttcaaaat 
                     atagcatcataggcgaggtatcttcgcggcaacctgccggccggatcgg 


seed9complete.g   53 KPQCKQCCTLDQQPAAQR-TYAKAILEV                      
                     + +C+ CCT D+  AA   TY  A +E+                      
                     RKECESCCTADKGGAADDVTYVSARIEL                      
contig_27:subse10147 cagtgattaggagggggggatgtgcagc                      
                     gaagagggccaaggccaatcatccgtat                      
                     gagcacccaacgtcgtttcccgccccgc                      


//
>contig_27:subseq(279812,20000).pep
AALLSVVIALPSMPAPETVADCLGLGFEKDVVSCRLCAKLLLVTQNDELRKECESCCTAD
KGGAADDVTYVSARIEL
//
>contig_27:subseq(279812,20000).[10000:10230].sp
GCAGCTCTACTGAGCGTAGTTATCGCACTTCCATCGATGCCCGCGCCAGAGACGGTTGCA
GATTGCCTTGGTCTCGGGTTCGAGAAGGACGTAGTAAGCTGCCGTCTGTGCGCCAAGCTG
CTCCTCGTGACGCAAAATGACGAGCTGCGGAAAGAGTGCGAAAGCTGCTGCACAGCAGAC
AAGGGTGGCGCGGCTGATGATGTCACCTACGTGTCCGCCCGCATCGAGCTC
//
contig_27:subseq(279812,20000)	GeneWise	match	10000	10230	39.53	+	.	contig_27:subseq(279812,20000)-genewise-prediction-1
contig_27:subseq(279812,20000)	GeneWise	cds	10000	10230	0.00	+	0	contig_27:subseq(279812,20000)-genewise-prediction-1
//