T-COFFEE, Version_7.54(Tue Jan 13 18:15:23 WEST 2009)
Cedric Notredame 
CPU TIME:0 sec.
SCORE=98
*
 BAD AVG GOOD
*
PHYCAscaffold_8   :  98
gi|288565202|gb   :  98
cons              :  98

PHYCAscaffold_8   -YDYDLVVIGGGSGGLACSKEAASFGQKVCVLDYVKPSPQGTSWG
gi|288565202|gb   TYDWDLVVIGGGSGGLAASKEAAKYGQKVLVLDYVKPSPQGSTWG

cons               **:*************.*****.:**** ***********::**


PHYCAscaffold_8   LGGTCVNVGCIPKKLMHQSSLIGEVIHHDGANFGWNLSSGDGNAP
gi|288565202|gb   LGGTCVNVGCIPKKLMHQSAIMGELLHKDAEAFGWAVPN-----A

cons              *******************:::**::*:*.  *** :..     .


PHYCAscaffold_8   TFNWKQLVSNVDGYIKSINFKYKVELRSKYVKYENFLGSFVNPHT
gi|288565202|gb   TFDWTKLVTSVQDYIHGLNFKYRVDLRDKKVKYENFLGTFKDAHT

cons              **:*.:**:.*:.**:.:****:*:**.* ********:* :.**


PHYCAscaffold_8   LELWHPRKGT--KQITTRDVVIAVGGRPKELTCPGGEHAISSDDI
gi|288565202|gb   LTLTNPAKGKPPKDVTFRRALIAVGGRPKSLDCPGADLAISSDDI

cons              * * :* **.  *::* * .:********.* ***.: *******


PHYCAscaffold_8   FWMKKKEPGKTLVVGASYVALECAGFLKGMGYDVKVMVRSILLRG
gi|288565202|gb   FS-RPTPPGKTLVVGASYVALECAGFLKAQGFDVTVMVRSILLRG

cons              *  : . *********************. *:**.**********


PHYCAscaffold_8   FDQDMADKIGEYMEVQSGIEFIRKTVPQSITKLENGQLLVKWTSE
gi|288565202|gb   FDTDMAARIGTYMEEEAKIDFIKGAVPTSIEQLANGE--------

cons              ** *** :** *** :: *:**: :** ** :* **:        


PHYCAscaffold_8   DGESCEEAFDTVLNATGRDPDVAKLNLDKAGVKLNEKSGRIWVKN
gi|288565202|gb   ------GIYDTVLNATGRNPDVSGLNLPAAGVGLNPKTGRIAVTH

cons                      :*********:***: ***  *** ** *:*** *.:


PHYCAscaffold_8   EQTSTPNIYAIGDVIDAPELTPVAIQAGRLLSRRLYNNSTVQMDY
gi|288565202|gb   EQTSAPHIYAVGDVIDGPELTPVAIQAGRLLAKRLFDNSATLMAY

cons              ****:*:***:*****.**************::**::**:. * *


PHYCAscaffold_8   EKVCTAVFTPIEYGCCGMSEEDSKERFGEDNIEVYHTNFVPLEWS
gi|288565202|gb   DKVCTAVFTPIEYGCCGLSEDAAIETIGADNLGVYHQSFTPLEWS

cons              :****************:**: : * :* **: *** .*.*****


PHYCAscaffold_8   LSTDTRTAAESCYLKVICDKTRDKFVVGFHYLGPNAGEVTQAMGL
gi|288565202|gb   LSHD-RALAKECYCKLIVDRTQNDRVVGFHYLGPNAGEVTQAVGI

cons              ** * *: *:.** *:* *:*::. *****************:*:


PHYCAscaffold_8   AMKLGFTYDQMVDTVGIHPTTAESFTTLEVTKSSGGATTGGGC--
gi|288565202|gb   AMKLNASYDDFVSTVGIHPTTAEIFTTLEITKESGLDASAAGCXG

cons              ****. :**::*.********** *****:**.**  ::..**