T-COFFEE, Version_8.99(Fri Feb 18 08:27:45 CET 2011 - Revision 596)
Cedric Notredame 
CPU TIME:0 sec.
SCORE=96
*
 BAD AVG GOOD
*
PHYCAscaffold_8   :  96
SPP00000034_1.0   :  95
cons              :  96

PHYCAscaffold_8   ---------NYDYDLVVIGGGSGGLACSKEAAS
SPP00000034_1.0   MNGPEDLPKSYDYDLIIIGGGSGGLAAAKEAAQ

cons                       .*****::*********.:****.


PHYCAscaffold_8   FGQKVCVLDYVKPSPQGTSWGLGGTCVNVGCIP
SPP00000034_1.0   YGKKVMVLDFVTPTPLGTRWGLGGTCVNVGCIP

cons              :*:** ***:*.*:* ** **************


PHYCAscaffold_8   KKLMHQSSLIGEVIHHDGANFGWNLSSGDGNAP
SPP00000034_1.0   KKLMHQAALLGQAL-QDSRNYGWKVEET----V

cons              ******::*:*:.: :*. *:**::..      


PHYCAscaffold_8   TFNWKQLVSNVDGYIKSINFKYKVELRSKYVKY
SPP00000034_1.0   KHDWDRMIEAVQNHIGSLNWGYRVALREKKVVY

cons              ..:*.:::. *:.:* *:*: *:* **.* * *


PHYCAscaffold_8   ENFLGSFVNPHTLELWHPRKGTKQITTRDVVIA
SPP00000034_1.0   ENAYGQFIGPHRIKATNNKGKEKIYSAERFLIA

cons              **  *.*:.** ::  : :   *  ::. .:**


PHYCAscaffold_8   VGGRPKELTCPGG-EHAISSDDIFWMKKKEPGK
SPP00000034_1.0   TGERPRYLGIPGDKEYCISSDDLFSLP-YCPGK

cons              .* **: *  **. *:.*****:* :    ***


PHYCAscaffold_8   TLVVGASYVALECAGFLKGMGYDVKVMVRSILL
SPP00000034_1.0   TLVVGASYVALECAGFLAGIGLDVTVMVRSILL

cons              ***************** *:* **.********


PHYCAscaffold_8   RGFDQDMADKIGEYMEVQSGIEFIRKTVPQSIT
SPP00000034_1.0   RGFDQDMANKIGEHME-EHGIKFIRQFVPIKVE

cons              ********:****:** : **:***: ** .: 


PHYCAscaffold_8   KLENGQ---LLVKWT-SEDGESCEEAFDTVLNA
SPP00000034_1.0   QIEAGTPGRLRVVAQSTNSEEIIEGEYNTVMLA

cons              ::* *    * *    ::. *  *  ::**: *


PHYCAscaffold_8   TGRDPDVAKLNLDKAGVKLNEKSGRIWVKN-EQ
SPP00000034_1.0   IGRDACTRKIGLETVGVKINEKTGKIPVTDEEQ

cons               ***. . *:.*:..***:***:*:* *.: **


PHYCAscaffold_8   TSTPNIYAIGDVI-DAPELTPVAIQAGRLLSRR
SPP00000034_1.0   TNVPYIYAIGDILEDKVELTPVAIQAGRLLAQR

cons              *..* ******:: *  *************::*


PHYCAscaffold_8   LYNNSTVQMDYEKVCTAVFTPIEYGCCGMSEED
SPP00000034_1.0   LYAGSTVKCDYENVPTTVFTPLEYGACGLSEEK

cons              ** .***: ***:* *:****:***.**:***.


PHYCAscaffold_8   SKERFGEDNIEVYHTNFVPLEWSLSTDTRTAAE
SPP00000034_1.0   AVEKFGEENIEVYHSYFWPLEWTIPSR---DNN

cons              : *:***:******: * ****::.:      :


PHYCAscaffold_8   SCYLKVICDKTRDKFVVGFHYLGPNAGEVTQAM
SPP00000034_1.0   KCYAKIICNTKDNERVVGFHVLGPNAGEVTQGF

cons              .** *:**:.. :: ***** **********.:


PHYCAscaffold_8   GLAMKLGFTYDQMVDTVGIHPTTAESFTTLEVT
SPP00000034_1.0   AAALKCGLTKKQLDSTIGIHPVCAEVFTTLSVT

cons              . *:* *:* .*: .*:****. ** ****.**


PHYCAscaffold_8   KSSGGATTGGGCXG
SPP00000034_1.0   KRSGASILQAGCXG

cons              * **.:   .****