Total hits : 9

1 PHYCAscaffold 84:subseq(86261 21487): 5017 5127 upstemen: -5.10 fullstructen: -13.60 GGUUUCUGGA CGUGGUC AAGUGGAUCUACA CUGAG UACCAUUCUGAU CC UACUAUAACUCUGUUUUGGGUCCGU GGCGAAGUGGA UGAA UGGUAU GGAUAC AGCAAAGACG COVE score: 0 (Recommended threshold for COVE: 15)
2 PHYCAscaffold 84:subseq(86261 21487): 14737 14845 upstemen: -4.99 fullstructen: -13.89 CCUUCUUAGG GGCAUGU CCGACCAUU UUGAA GCCGAACGGUUUA CC AGCAGCUCCCAUGACGCCGACGACG UACUCGUGUGGC UCGAU ACUUG ACAGGU AGAAGCUCCC COVE score: 0 (Recommended threshold for COVE: 15)
3 PHYCAscaffold 84:subseq(86261 21487): 17393 17503 upstemen: -8.30 fullstructen: -21.60 CUGCUCACGC GUUCGGG AGGCAAGCGGUUG UUGAU UCGAGCGGAUGUC AA UGUCCCCGCUGGUACUU ACGAGCUGUACGA CGAG CACGAGCUCU UCUCCGC UCUGGCCAAG COVE score: 0 (Recommended threshold for COVE: 15)
4 PHYCAscaffold 84:subseq(86261 21487): 18485 18582 upstemen: -4.00 fullstructen: -25.60 ACGCCUGCCG ACUACAC GGCGUGUGCU UUGAC GUGGAGAGGA CC UUGGGCACACUCU UCCUGCUUGC UGAC AGUCUCACCG CUGGGGU GUUUGGCGUC COVE score: 0 (Recommended threshold for COVE: 15)
5 PHYCAscaffold 84:subseq(86261 21487): 19243 19349 upstemen: -5.71 fullstructen: -14.41 GUACGGUCCU GAUGCUG CGCCAACCACGAG CUGAA GCAGCGGCUUGG CC UUGCCCCACACACGAG CACGGCCCUGAC CGAA CUUGUCCUC AAAGAUC UCAGCGUAAA COVE score: 0 (Recommended threshold for COVE: 15)
6 PHYCAscaffold 84:subseq(86261 21487): 20288 20389 upstemen:-11.80 fullstructen: -31.70 GCGGCCGGCG GGGGCGU CUUGUGGACA UUGAG ACGCGACGCUGC AA GGCGGUCGCGCGUAGCUGCC GAGGUCUUCGU GGAC GUCUG ACGCGU GAGAGCCGCG COVE score: 0 (Recommended threshold for COVE: 15)
7 PHYCAscaffold 84:subseq(86261 21487): 20456 20550 upstemen: -5.10 fullstructen: -15.50 UGCGCUGCGG UCAGCUG UGCGAUGGCUCCC UUGAG CAGCGUCAGCU CC UUGAGCACGUCGU AGCGGGUGACG UGAA GCU CGUUCA UGACUUCUCG COVE score: 0 (Recommended threshold for COVE: 15)
8 PHYCAscaffold 84:subseq(86261 21487): 15729 15624 (SECIS on complementary strand) upstemen: -8.65 fullstructen: -17.25 UGCUGGAGCC CGAGAUG UCGCUGCCAAUG CUGAG GUGACGGCAUC AA AGACUGGCGAAUCUCAA CACUGCUGUUGC GGAA UUGCUACAGA CAACUU CACAUUAGUA COVE score: 0 (Recommended threshold for COVE: 15)
9 PHYCAscaffold 84:subseq(86261 21487): 2501 2399 (SECIS on complementary strand) upstemen: -5.09 fullstructen: -15.98 UCGGAUGCUU CACGCUG CUCCUUUCGCUGU GUGAC GAACGCUAUCCA CC GGUAAAACCAUCU CGGUAAGCAUUU CGAC CGAUGAAA UUGCUUG GCUCGUUCAU COVE score: 0 (Recommended threshold for COVE: 15)