genewise output Score 18.40 bits over entire alignment Scores as bits over a synchronous coding model Warning: The bits scores is not probablistically correct for single seqs See WWW help for more info SPP00000081_1.0 213 NWEAMTEAIQSHIGSLNWGYRVTL +W+++++ +++ S W VTL SWDSLSQCLKASRSSNGWSSNVTL PHYCAscaffold_811735 ttgtcacttagtcttagtatagac cgactgagtaccgccagggcatct cgcaacgcggttgcacagtatctg // >PHYCAscaffold_84:subseq(86261,21487).pep SWDSLSQCLKASRSSNGWSSNVTL // >PHYCAscaffold_84:subseq(86261,21487).[11735:11806].sp TCCTGGGACTCACTAAGCCAGTGCTTGAAGGCTTCTCGGTCCTCAAACGGATGGAGTTCA AATGTCACTCTG // PHYCAscaffold_84:subseq(86261,21487) GeneWise match 11735 11806 18.40 + . PHYCAscaffold_84:subseq(86261,21487)-genewise-prediction-1 PHYCAscaffold_84:subseq(86261,21487) GeneWise cds 11735 11806 0.00 + 0 PHYCAscaffold_84:subseq(86261,21487)-genewise-prediction-1 // genewise output Score 557.63 bits over entire alignment Scores as bits over a synchronous coding model Warning: The bits scores is not probablistically correct for single seqs See WWW help for more info SPP00000081_1.0 123 DDSAHDYDLIIIGGGSGGLSCAKEAANLGKKVMVLDFVVPSPQGTTWGL +++ +DYDL++IGGGSGGL+C+KEAA+ G+KV VLD+V PSPQGT+WGL EETNYDYDLVVIGGGSGGLACSKEAASFGQKVCVLDYVKPSPQGTSWGL PHYCAscaffold_-11487 ggaatgtgcggagggtggcgttagggttgcagtgcgtgactccgattgc aacaaaaattttgggcggtcgcaaccctgaatgttaatacccagccggt agccccctaggtccatacgcccgagctctggctaacccgggtgcgtgta SPP00000081_1.0 172 GGTCVNVGCIPKKLMHQAALLGHAL-QDAKKYGWEYNQ----QVKHNWE GGTCVNVGCIPKKLMHQ++L+G + D +GW + NW+ GGTCVNVGCIPKKLMHQSSLIGEVIHHDGANFGWNLSSGDGNAPTFNWK PHYCAscaffold_-11340 ggatgaggtacaacaccatcagggaccgggatgtacttgggagcatata ggcgtatggtcaattaagcttgattaaagcatggatccgagaccctaga gcgtctcccccggcgcactatcgccctcctctcgttgtgtactattcgg SPP00000081_1.0 216 AMTEAIQSHIGSLNWGYRVTLREKGVTYVNSFGEFVDLHKIKATNKKGQ + + +I S+N+ Y+V LR K V Y N +G FV+ H ++ + + QLVSNVDGYIKSINFKYKVELRSKYVKYENFLGSFVNPHTLELWHPRKG PHYCAscaffold_-11193 ctgtagggtaaaaatataggccaatgatgatcgttgaccatgttcccag attcatagatagtataaatatggaataaaattgcttacactatgacgag ggggcgcgccaccccgcgggactgctgcgccgctctcccaggggctcgc SPP00000081_1.0 265 ETFYTASKFVIATGERPRYLGIQGDKEYCITSDDLFSLPYC-PGCTLVV T VIA G RP+ L G E+ I+SDD+F + PG TLVV TKQITTRDVVIAVGGRPKELTCPGG-EHAISSDDIFWMKKKEPGKTLVV PHYCAscaffold_-11046 aacaaacgggaggggccagtatcgg gcgataggattaaaagcgaacgg caatccgatttctgggcaatcgcgg aactcgaattgtaaaacgacttt aggctattgctttttacgggctata gtgtgtcttcgggaggacgttgt SPP00000081_1.0 313 GASYVGLECAGFLAGLGLDVTVMVRSVLLRGFDQEMAEKVGSYLE-QQG GASYV LECAGFL G+G DV VMVRS+LLRGFDQ+MA+K+G Y+E Q G GASYVALECAGFLKGMGYDVKVMVRSILLRGFDQDMADKIGEYMEVQSG PHYCAscaffold_-10902 ggttggcgtggtcagagtggagagctatccgtgcgaggaaggtaggctg gccatctagcgttagtgaatatttgctttggtaaatcaatgaatatacg ccgcgcggtaccggcgcctggggcactgttcccgcgccgtcgcggggat SPP00000081_1.0 361 VKFQRKFTPILVQQLEKGLPGKLKVVAKSTEGPETVEGIYNTVLLAIGR ++F RK P + +LE G+L V S +G E+ E ++TVL A GR IEFIRKTVPQSITKLEN---GQLLVKWTSEDG-ESCEEAFDTVLNATGR PHYCAscaffold_-10755 agtacaagcctaaacga gcccgataaggg gatgggtgagcagagc tattgactcactcataa gatttagcgaag aggaactacttaccgg tgctggaaggccgacgc tgcgaggacaca gttgatcttgtcttct SPP00000081_1.0 410 DSCTRKIGLEKIGVKINEKNGKIPVNDVEQTNVPHVYAIGDILDGKPEL D K+ L+K GVK+NEK+G+I V + EQT+ P++YAIGD++D PEL DPDVAKLNLDKAGVKLNEKSGRIWVKN-EQTSTPNIYAIGDVIDA-PEL PHYCAscaffold_-10620 gcgggacacgagggacagatgcatgaa gcatacaatgagggagg cgc acatcatataacgtataaacggtgtaa aaccccatactgattac cat tttggggcgcgtagggtggtaccgggc gggggcctccttttccg aac SPP00000081_1.0 459 TPVAIQAGKLLARRLFGVSLEKCDYINIPTTVFTPLEYGCCGLSEEKAI TPVAIQAG+LL+RRL+ S + DY + T VFTP+EYGCCG+SEE + TPVAIQAGRLLSRRLYNNSTVQMDYEKVCTAVFTPIEYGCCGMSEEDSK PHYCAscaffold_-10479 acggacggctctccttaatagcagtgagtaggtacagtgttgatgggaa cctctacggttcggtaaacctataaaatgccttcctaaggggtcaaaga gtcctgtaagtgttgctcgggggccgggcaagtttcgcgctcggggcca SPP00000081_1.0 508 EMYKKENLEVYHTLFWPLEWTVAGRDNNT----CYAKIICNKFDNERVV E + ++N+EVYHT F PLEW+++ D T CY K+IC+K ++ VV ERFGEDNIEVYHTNFVPLEWSLS-TDTRTAAESCYLKVICDKTRDKFVV PHYCAscaffold_-10332 gctgggaaggtcaatgccgtttt agacagggttttagatgaacgatgg agtgaaatataacattctagctc cacgcccacgatattgaacgaattt gctagcccgtccgctgggggggg gcgcaaaggtcgggctcagttgcgg SPP00000081_1.0 553 GFHLLGPNAGEITQGFAAAMKCGLTKQLLDDTIGIHPTCGEVFTTLEIT GFH LGPNAGE+TQ + AMK G T + DT+GIHPT E FTTLE+T GFHYLGPNAGEVTQAMGLAMKLGFTYDQMVDTVGIHPTTAESFTTLEVT PHYCAscaffold_-10188 gtctcgcaggggacgagtgaatgtatgcaggaggaccaaggttaacgga gtaatgcacgatcactgtctatgtcaaattactgtaccccactcctatc cctctagttcggtacgggcgggccgccagttccctcgggcggcgtgggg SPP00000081_1.0 602 KSSGLDITQKGC KSSG T GC KSSGGATTGGGC PHYCAscaffold_-10041 aaagggaagggt aggggcccgggg gcttagctcgtc // >PHYCAscaffold_84:subseq(86261,21487).pep EETNYDYDLVVIGGGSGGLACSKEAASFGQKVCVLDYVKPSPQGTSWGLGGTCVNVGCIP KKLMHQSSLIGEVIHHDGANFGWNLSSGDGNAPTFNWKQLVSNVDGYIKSINFKYKVELR SKYVKYENFLGSFVNPHTLELWHPRKGTKQITTRDVVIAVGGRPKELTCPGGEHAISSDD IFWMKKKEPGKTLVVGASYVALECAGFLKGMGYDVKVMVRSILLRGFDQDMADKIGEYME VQSGIEFIRKTVPQSITKLENGQLLVKWTSEDGESCEEAFDTVLNATGRDPDVAKLNLDK AGVKLNEKSGRIWVKNEQTSTPNIYAIGDVIDAPELTPVAIQAGRLLSRRLYNNSTVQMD YEKVCTAVFTPIEYGCCGMSEEDSKERFGEDNIEVYHTNFVPLEWSLSTDTRTAAESCYL KVICDKTRDKFVVGFHYLGPNAGEVTQAMGLAMKLGFTYDQMVDTVGIHPTTAESFTTLE VTKSSGGATTGGGC // >PHYCAscaffold_84:subseq(86261,21487).[11487:10004].sp GAAGAGACCAACTACGACTACGATCTAGTGGTGATTGGCGGCGGATCTGGAGGCCTGGCC TGCTCCAAGGAAGCGGCCTCTTTCGGTCAGAAGGTCTGTGTACTAGACTACGTCAAGCCG TCGCCTCAGGGCACGTCTTGGGGTCTAGGGGGCACGTGTGTCAATGTCGGCTGCATCCCC AAGAAGCTCATGCACCAAAGCTCTCTAATTGGCGAGGTCATCCACCATGACGGCGCTAAC TTTGGCTGGAATCTTTCGTCTGGGGATGGAAACGCTCCAACTTTTAACTGGAAGCAGTTG GTGTCGAACGTGGACGGGTACATCAAAAGCATCAACTTCAAGTACAAGGTGGAGCTACGC AGTAAGTACGTTAAGTACGAGAACTTCCTGGGCTCTTTCGTTAACCCCCACACATTGGAG TTGTGGCACCCTCGCAAGGGCACAAAGCAGATCACTACACGTGATGTGGTCATTGCTGTT GGTGGTCGACCCAAGGAGTTGACCTGTCCAGGTGGAGAGCATGCGATTTCGAGTGACGAT ATTTTCTGGATGAAGAAAAAGGAGCCAGGCAAGACTCTTGTGGTTGGCGCCTCGTACGTG GCCCTGGAGTGTGCAGGCTTCCTGAAGGGCATGGGCTACGATGTGAAGGTGATGGTCCGA TCCATTTTGCTTCGTGGCTTCGACCAGGACATGGCCGACAAGATTGGCGAGTACATGGAG GTGCAGTCAGGTATTGAGTTCATTCGGAAGACAGTACCGCAGTCCATCACGAAACTCGAG AACGGTCAGCTCCTGGTAAAGTGGACAAGCGAAGACGGAGAGAGTTGTGAGGAAGCTTTC GATACTGTGCTTAACGCTACTGGCCGTGATCCTGATGTGGCGAAGCTGAACCTGGACAAG GCTGGAGTGAAGCTGAATGAGAAGTCTGGACGCATCTGGGTGAAGAACGAGCAGACGTCG ACGCCCAACATTTACGCCATTGGTGATGTTATCGACGCGCCAGAACTCACGCCTGTCGCC ATTCAGGCTGGACGATTGCTTTCGCGTCGTTTGTACAATAACTCGACGGTGCAGATGGAC TACGAGAAGGTGTGCACAGCAGTGTTTACTCCTATCGAGTACGGGTGCTGTGGCATGTCG GAGGAGGACAGCAAAGAGCGCTTTGGAGAGGACAACATCGAGGTTTACCACACGAACTTT GTGCCGCTGGAGTGGTCGTTGTCGACGGACACGCGCACAGCAGCAGAGTCGTGTTACTTG AAGGTGATCTGTGACAAAACGCGTGATAAGTTCGTGGTGGGCTTCCATTACCTTGGACCG AATGCTGGCGAGGTGACTCAAGCCATGGGGTTGGCCATGAAGTTGGGCTTCACGTACGAC CAAATGGTTGATACCGTCGGCATTCACCCGACGACGGCCGAGTCGTTCACGACTCTGGAG GTGACGAAGAGCAGTGGTGGAGCGACCACTGGCGGGGGTTGC // PHYCAscaffold_84:subseq(86261,21487) GeneWise match 11487 10006 565.62 - . PHYCAscaffold_84:subseq(86261,21487)-genewise-prediction-1 PHYCAscaffold_84:subseq(86261,21487) GeneWise cds 11487 10006 0.00 - 0 PHYCAscaffold_84:subseq(86261,21487)-genewise-prediction-1 //