genewise output Score 403.56 bits over entire alignment Scores as bits over a synchronous coding model Warning: The bits scores is not probablistically correct for single seqs See WWW help for more info SPP00000081_1.0 130 DLIIIGGGSGGLSCAKEAANLGKKVMVLDFVVPSPQGTTWGLGGTCVNV DL++IGGGSGGL+ AKEAA LG KV+ D+V PSPQG+ WGLGGTCVNV DLVVIGGGSGGLAAAKEAARLGAKVVCFDYVEPSPQGSKWGLGGTCVNV gi|338242564|gb 9967 gtggagggaggtgggagggacggaggttgtggctccgtatgcggatgag attttggggggtcccaaccgtgcattgtaatacccagcaggtggcgtat tgggtccgtccggagggggggtcgcgttctgggaggtcggtgcggtgct SPP00000081_1.0 179 GCIPKKLMHQAALLGHALQ-DAKKYGWEYNQQVKHNWEAMTEAIQSHIG GCIPK +MH +A LG + A GW + W+ + + +Q +I GCIPKIIMHNSAKLGQLMDHSAAPLGWSGTDGLTFVWQDLVKTVQLYIK gi|338242564|gb10114 gtacaaaacatgatgctagctggccgtagaggcatgtcgcgaagcctaa ggtcatttaaccatgattaacccctggggcagtcttgaattactatata tctggccgccgcggaaggctagcatcgtttctgaccggcgaggtatccg SPP00000081_1.0 227 SLNWGYRVTLREKGVTYVNSFGEFVDL-HKIKATNKKGQETFYT----- LN+ YR LR GV Y+N+ ++ + ++ K G+ YT QLNFSYRRGLRSAGVEYINAKATLLAAPERAQSGAKSGRVVEYTLKGER gi|338242564|gb10261 ccatttccgccaggggtaagagaccggcgagctggatgcgggtacaggc atatcagggtggcgtaatacaccttcccagcacgcacggttaactagag atccacatctccctagttctatacccccgacggccgttagggtacgcgg SPP00000081_1.0 270 ----ASKFVIATGERPRYL--GIQGDKEYCITSDDLFSLPYCPGCTLVV A ++A G RP Y+ + G E +TSDDLFSL P TLVV KEVRAKCVLVAVGGRP-YIPRDVPGAVELAVTSDDLFSLSREPKKTLVV gi|338242564|gb10408 aggcgatgtgggggcc taccggcggggtggaaggttattcgcaaatgg aatgcagtttctgggc atcgatcgctatctcgaattgtcgacaacttt ggggggttgacgtagg ctagctctgtggcggttcgttagcggggtggg SPP00000081_1.0 313 GASYVGLECAGFLAGLGLDVTVMVRSVLLRGFDQEMAEKVGSYLEQQGV GASY+ LECAGFL L DVTV VRS++LRGFD++ AE + +++QG GASYIALECAGFLTHLRYDVTVCVRSIVLRGFDRQCAEHIQLVMKEQGT gi|338242564|gb10552 ggttagcgtggtcaccctggagtgctagccgtgcctggcactgaagcga gccatctagcgttcatgaatctgtgctttggtagagcaatatttaaagc tggctaagcggcgacgtttacgtaccagtctccagtgaccgggggaacc SPP00000081_1.0 362 KF---------QRKFTPILVQQLEKGLPGKLKVVAKSTEGPETV----- KF QR P + G G + +G + + KFLEHEQVVSLQRVGEPDVAASDLAGDRGADTTSNTTADGGDKILVRFA gi|338242564|gb10699 atcgcgcggtcccgggcggggagcgggcgggaataaagggggaacgctg attaaaattctagtgacatccgatcgaggcacccacccaggaatttgtc gcgacaaaggaacgcggtgctccacactggtggctgccctccgcccgca SPP00000081_1.0 397 ---EGIYNTVLLAIGRDSCTRKIGLEKIGVKINEKNGKIPVNDVEQTNV E +++TV+ A+GR +CT+ +G E G+ ++ +GKI V+++EQT+ SGREEMFDTVVYAVGRRACTQSLGCEAAGIAMHPASGKIVVDELEQTSA gi|338242564|gb10846 tgcggatgaggtgggccgtacacgtggggagaccgtgaaggggcgcatg cggaattacttactgggcgcagtggaccgtctacccgatttaataaccc cacaagccagccccgccaccatcccgcccccgccatcgtgccgagatca SPP00000081_1.0 443 PHVYAIGDILDGKPELTPVAIQAGKLLARRLFGVSLEKCDYINIPTTVF P VYAIGD+ G+PELTPVAI+AG+LLARRLFG + E Y NIPT VF PGVYAIGDVCHGRPELTPVAIKAGELLARRLFGGANEPMVYTNIPTVVF gi|338242564|gb10993 cggtgagggtcgccgcacggaagggtcgacctgggagcagtaaacaggt cgtactgatgaggcatcctctacgattcggttggcaacttacatccttt ctccctacctcccgaatctccgccagccgcctacccacgtcatacgtcc SPP00000081_1.0 492 TPLEYGCCGLSEEKAIEMYKKENLEVYHTLFWPL-----EWTVAGRDNN TP+EYGCCGLSEE AI Y ++N+EV+ F + W A TPIEYGCCGLSEEDAITRYGQDNIEVFLFGFNSVPVSACHWKKALSTRK gi|338242564|gb11140 acagtgttgctggggaaatgcgaaggtctgtatgcgtgtctaagctaca cctaaggggtcaaactcgagaaatattttgtactctccgagaactccga caaatcccattaatccgactactcggcccccctgctcttcgagacacca SPP00000081_1.0 536 TCY---------AKIICNKFDNERVVGFHLLGPN + KIIC K DN ++VG+H + N DEFDLDVTPLNLSKIICKKPDN-KIVGYHCIAMN gi|338242564|gb11287 ggtgcggaccacaaaataacga aaggtctagaa aatatatcctatgattgaacaa attgaagtcta catcgtcccttccacccgatcc actctccccgc SPP00000081_1.0 561 AGEITQGFAAAMKCGLTKQLLDDTIG AGE TQG+A A+KCGLTK LD +G AGETTQGYALALKCGLTKDDLDAVVG gi|338242564|gb11386 GTAAGCG Intron 1 TAGgggaacgtgtgcatgtaaggtggggg <0-----[11386:11508]-0>cgaccagactctaggtcaaatacttg tagaggtcgggggtggcgctgcacgt SPP00000081_1.0 587 IHPTCGEVFTTLEITKSSGLD-ITQKGCXG IHPT E F ++ IT+ SG GC G IHPTDAESFHSMTITRRSGESFMAAGGCGG gi|338242564|gb11587 accagggttctaaaaccaggataggggtgg taccacactactctcggggagttccggggg ccgtcaggccaggcttcccatcgtttcctt // >gi|338242564|gb|AFNH01001883.1|:subseq(2496,17000).pep DLVVIGGGSGGLAAAKEAARLGAKVVCFDYVEPSPQGSKWGLGGTCVNVGCIPKIIMHNS AKLGQLMDHSAAPLGWSGTDGLTFVWQDLVKTVQLYIKQLNFSYRRGLRSAGVEYINAKA TLLAAPERAQSGAKSGRVVEYTLKGERKEVRAKCVLVAVGGRPYIPRDVPGAVELAVTSD DLFSLSREPKKTLVVGASYIALECAGFLTHLRYDVTVCVRSIVLRGFDRQCAEHIQLVMK EQGTKFLEHEQVVSLQRVGEPDVAASDLAGDRGADTTSNTTADGGDKILVRFASGREEMF DTVVYAVGRRACTQSLGCEAAGIAMHPASGKIVVDELEQTSAPGVYAIGDVCHGRPELTP VAIKAGELLARRLFGGANEPMVYTNIPTVVFTPIEYGCCGLSEEDAITRYGQDNIEVFLF GFNSVPVSACHWKKALSTRKDEFDLDVTPLNLSKIICKKPDNKIVGYHCIAMNAGETTQG YALALKCGLTKDDLDAVVGIHPTDAESFHSMTITRRSGESFMAAGGCGG // >gi|338242564|gb|AFNH01001883.1|:subseq(2496,17000).[9967:11676].sp GATTTGGTGGTGATTGGCGGCGGGAGTGGCGGCTTGGCGGCAGCGAAGGAGGCGGCGAGG CTGGGTGCCAAGGTCGTGTGTTTTGACTATGTGGAGCCGTCACCGCAGGGTTCCAAGTGG GGTCTGGGCGGGACGTGTGTGAACGTTGGTTGCATTCCGAAGATCATCATGCACAACTCG GCCAAGTTGGGACAATTGATGGACCATTCAGCGGCCCCACTTGGCTGGAGTGGTACTGAC GGTCTGACATTCGTCTGGCAGGACCTGGTAAAGACGGTTCAACTTTACATCAAGCAACTT AACTTCTCATACCGACGTGGCCTTCGCAGCGCCGGTGTAGAGTATATTAACGCTAAAGCT ACACTCCTCGCCGCCCCCGAGAGAGCCCAGTCGGGCGCCAAGTCTGGTCGAGTGGTGGAG TATACACTCAAGGGCGAGCGGAAGGAGGTGCGGGCGAAGTGTGTTTTGGTAGCCGTGGGT GGACGGCCGTACATTCCACGGGACGTTCCCGGTGCGGTTGAGTTGGCCGTGACGAGTGAT GACTTGTTTAGTTTATCGCGCGAGCCGAAGAAGACTTTGGTGGTGGGTGCGTCGTACATT GCACTAGAGTGCGCGGGGTTCCTGACACACCTGCGTTATGATGTAACCGTGTGTGTACGC TCCATAGTGCTTCGCGGTTTCGACCGACAGTGTGCGGAACACATCCAGTTGGTGATGAAG GAACAAGGCACCAAGTTCCTGGAACACGAACAAGTAGTGTCGCTACAACGCGTGGGCGAG CCGGATGTGGCCGCTAGCGACCTAGCCGGAGACCGTGGGGCGGATACGACGTCCAATACG ACCGCCGACGGTGGCGACAAGATCCTCGTCCGGTTCGCATCCGGACGCGAAGAAATGTTC GACACAGTGGTCTACGCCGTCGGGCGCCGCGCATGCACCCAAAGTCTCGGCTGCGAGGCC GCCGGCATCGCCATGCACCCCGCATCTGGCAAGATTGTGGTCGACGAGCTAGAGCAAACT TCCGCACCCGGTGTCTACGCCATTGGAGACGTCTGTCACGGCCGCCCGGAACTAACTCCC GTTGCCATCAAGGCCGGCGAATTGCTCGCCAGGCGCCTCTTTGGAGGCGCCAACGAACCC ATGGTTTACACAAATATACCCACGGTTGTCTTCACCCCAATAGAATATGGCTGCTGCGGA CTTTCTGAAGAAGATGCCATCACGAGATACGGTCAAGACAATATCGAGGTGTTCCTCTTC GGCTTCAACTCTGTGCCCGTTTCCGCTTGTCACTGGAAAAAGGCACTCTCAACCCGCAAA GACGAATTTGACCTGGATGTCACCCCCCTTAATCTCAGCAAAATCATCTGCAAGAAACCT GACAACAAAATCGTTGGCTATCACTGCATCGCCATGAACGCTGGAGAGACAACGCAGGGT TACGCGTTGGCGCTGAAGTGTGGGTTGACCAAGGACGATTTGGACGCAGTCGTGGGTATC CACCCGACTGACGCAGAGTCGTTCCACTCAATGACGATCACTCGTCGCAGCGGCGAAAGT TTCATGGCTGCTGGTGGCTGCGGTGGT // gi|338242564|gb|AFNH01001883.1|:subseq(2496,17000) GeneWise match 9967 11676 439.50 + . gi|338242564|gb|AFNH01001883.1|:subseq(2496,17000)-genewise-prediction-1 gi|338242564|gb|AFNH01001883.1|:subseq(2496,17000) GeneWise cds 9967 11385 0.00 + 0 gi|338242564|gb|AFNH01001883.1|:subseq(2496,17000)-genewise-prediction-1 gi|338242564|gb|AFNH01001883.1|:subseq(2496,17000) GeneWise intron 11386 11508 0.00 + . gi|338242564|gb|AFNH01001883.1|:subseq(2496,17000)-genewise-prediction-1 gi|338242564|gb|AFNH01001883.1|:subseq(2496,17000) GeneWise cds 11509 11676 0.00 + 0 gi|338242564|gb|AFNH01001883.1|:subseq(2496,17000)-genewise-prediction-1 // genewise output Score 17.73 bits over entire alignment Scores as bits over a synchronous coding model Warning: The bits scores is not probablistically correct for single seqs See WWW help for more info SPP00000081_1.0 523 WPLEWTVA WP WT+A WPRRWTMA gi|338242564|gb-2831 tcaataag gcgggctc gcaagtga // >gi|338242564|gb|AFNH01001883.1|:subseq(2496,17000).pep WPRRWTMA // >gi|338242564|gb|AFNH01001883.1|:subseq(2496,17000).[2831:2806].sp TGGCCCAGAAGATGGACTATGGCA // gi|338242564|gb|AFNH01001883.1|:subseq(2496,17000) GeneWise match 2831 2808 17.73 - . gi|338242564|gb|AFNH01001883.1|:subseq(2496,17000)-genewise-prediction-1 gi|338242564|gb|AFNH01001883.1|:subseq(2496,17000) GeneWise cds 2831 2808 0.00 - 0 gi|338242564|gb|AFNH01001883.1|:subseq(2496,17000)-genewise-prediction-1 //