genewise output Score 20.58 bits over entire alignment Scores as bits over a synchronous coding model Warning: The bits scores is not probablistically correct for single seqs See WWW help for more info SPP00000034_1.0 320 DEEQTNVPYIYAIGD DE+ NV IY IGD DEQHDNVERIYMIGD gi|325189095|em14849 ggccgaggcataagg aaaaaatagtattga tggtctggtctgctc // >gi|325189095|emb|FR824246.1|:subseq(22762,20821).pep DEQHDNVERIYMIGD // >gi|325189095|emb|FR824246.1|:subseq(22762,20821).[14849:14893].sp GATGAGCAGCATGACAATGTGGAGCGTATCTATATGATCGGTGAC // gi|325189095|emb|FR824246.1|:subseq(22762,20821) GeneWise match 14849 14893 20.58 + . gi|325189095|emb|FR824246.1|:subseq(22762,20821)-genewise-prediction-1 gi|325189095|emb|FR824246.1|:subseq(22762,20821) GeneWise cds 14849 14893 0.00 + 0 gi|325189095|emb|FR824246.1|:subseq(22762,20821)-genewise-prediction-1 // genewise output Score 227.32 bits over entire alignment Scores as bits over a synchronous coding model Warning: The bits scores is not probablistically correct for single seqs See WWW help for more info SPP00000034_1.0 13 YDLIIIGGGSGGLAAAKEAAQYGKKVMVLDFVTPTPLGTRWGLGGTCVN YD I+IGGGSGG+A+A+ AA YG KV++++ G GGTCVN YDYIVIGGGSGGVASARRAATYGAKVLLIERHREYEGA---GYGGTCVN gi|325189095|e-11518 tgtagagggaggggtgccggatggagccagcccgtggg gtggatga aaatttggggggtcccggcccagcattttagagaaagc gaggcgta ttcctcagactcacttattaccgcaagatatttgcacg ttttttgc SPP00000034_1.0 62 VGCIPKKLMHQAALLGQALQDSRNYG---WKVEETVKH-------DWDR GC+PKK+M+ AA + ++ + +Y + H DW R YGCVPKKVMYNAAAHVEHIERAPDYSIRPFASKGDTSHSFSFGDFDWGR gi|325189095|e-11380 tgtgcaagatagggcggcagagcgttacctgtaggatcttttggtgtgc aggtcaattaacccataatagccaactgctccagaccactctgataggg tacccagggtctagtgactaagttcataatagagcagttcttttctgaa SPP00000034_1.0 101 MIEAVQNHIGSLNWGYRVALREKKVVYENAYGQFIGPHRIKATNNKGKE M +I LN Y L K+ ++I R++ + MKVKRDAYIERLNGIYTRNLANAKIDTVTGIAKLIAKDRVQVN----QD gi|325189095|e-11233 aagacggtagctagatacacgagaagagagagatagagcgcga cg tatagacatagtagtacgatcacatactcgtcattcaagtata aa gaaatcgctgagtatctatagtagttagagcgagctgtctgct ac SPP00000034_1.0 150 KIYSAERFLIATGERPRYLGIPGDKEYCISSDDLFSLPYCPGKTLVVGA ++ + +LIA G P IPG E+ I SD F L P K VVGA SFFEGKHILIAVGGTPAMPSIPGI-EHAIDSDGFFKLETQPKKVAVVGA gi|325189095|e-11098 tttggacacaggggacgactacga gcgagaggttacgaccaagggggg cttagaatttctggccctcctcgt aactagagttatacacaatcttgc tctaagcacagcaacaagacccac gctttctaccggataaaacgtgct SPP00000034_1.0 199 SYVALECA FLAGIGLDVTVMVR- Y+A+E A + D ++ R GYIAVEIA G:G[ggt] VFNTLKSDTFLFCRF gi|325189095|e-10954 gtagggagGGTTTGTA Intron 1 TAGGTgtaacatgatcttct gatctatc <1-----[10929:10875]-1> ttactacactttggt gctttaat cttgcggtctattct SPP00000034_1.0 222 SILLRGFDQDMANKIGEHME HGI +LR FD + + + E ME +G+ DQVLRKFDPLVRDLVNEEME E:K[aag] NGV gi|325189095|e-10827 gcgtaatgccgcgtgaggagAAGTGCGTA Intron 2 CAGGagg aattgatacttgattaaata <2-----[10765:10715]-2> agt taaggattgcagcgctagga ccg SPP00000034_1.0 246 KFIRQFVPIKVEQIEAGTPGRLRVVAQSTNSEEIIEGEYNTVMLAIGRD F+R+ +E+I +L + A+ + + + ++ +++A+GR NFVRKS---HLEKIVKSEDDKLAITARIGDQSQTFS-NFDQIVMAVGRS gi|325189095|e-10704 atgcaa ctgaagatgggacgaagcaggcacatt atgcagagggct attgag ataattacaaaatctccgtgaagactc ataatttctggc tcccat tgagccggactaggtatctatacgatt tctgtgggttcg SPP00000034_1.0 295 ACTRKIGLETVGVKINEKTGKIPVTDEEQTNVPYIYAIGDILEDKVELT T +GLE VGV++NE TG I V +E T++P +YA+GD+ ELT PRTVDLGLEDVGVELNE-TGHIIVDAQENTSIPGVYALGDVTTTGWELT gi|325189095|e-10569 ccaggtgcggggggtag agcaagggcgaatacggtgcgggaaagtgca cgctatgtaatgtataa cgatttacaaacctcgtactgatcccggatc tgactgttatctcagta gtccccttaacagtctctccctcgtaagaca SPP00000034_1.0 344 PVAIQAGRLLAQRLYAGSTVKC-DYENVPTTVFTPLEYGACGLSEEKAV PVAI AGR LA RL+ C Y +PT VF+ G G +E +A+ PVAIAAGRRLADRLFNNEKEACLYYHQIPTVVFSHPPLGTIGYTEPEAI gi|325189095|e-10425 cggagggcccggcctaagaggtcttccacaggtaccccgaagtagcgga ctctccgggtcagttaaaaacgtaaaatcctttgacctgctgacacact attctataatactacccgagttgcctgcttgaccttctcccactaaaat SPP00000034_1.0 392 EKFGEENIEVYHSYFWPLEWTI---PSRDNNKCYAKIICNTKDNERVVG K+GEEN++ Y S F L +++ P + C K++C E VVG AKYGEENVKCYSSKFVNLLYSMAEDPEKKKKTCM-KLVC-VGSKETVVG gi|325189095|e-10278 gatgggagattaaatgatcttagggcgaaaaata acgt ggtagaggg caagaaatagaggattattactcaacaaaaacgt attg tgcaacttg agtaagtcatcccatctagtcgcaccgaggaacg acgt tccaatttg SPP00000034_1.0 438 FHVLGPNAGEVTQGFAAALKCGLTKKQLDSTIGIHPVCAEVFTTLS +HV G A E+ QGF A+K G TK D+ + IHP +E + T++ LHVAGDGADEMVQGFGVAMKMGATKADFDNIVAIHPTASEELVTMA gi|325189095|e-10137 ccggggggggagcgtgggaaaggaaggtgaaggaccagtggcgaag tatcgagcaattagtgtctatgccacataattctaccccaattctc gtttctgctagcaacccagagaccgtctccctactatagaagccgg // Making a G in phase 1 intron Making a K in phase 2 intron >gi|325189095|emb|FR824246.1|:subseq(22762,20821).pep YDYIVIGGGSGGVASARRAATYGAKVLLIERHREYEGAGYGGTCVNYGCVPKKVMYNAAA HVEHIERAPDYSIRPFASKGDTSHSFSFGDFDWGRMKVKRDAYIERLNGIYTRNLANAKI DTVTGIAKLIAKDRVQVNQDSFFEGKHILIAVGGTPAMPSIPGIEHAIDSDGFFKLETQP KKVAVVGAGYIAVEIAGVFNTLKSDTFLFCRFDQVLRKFDPLVRDLVNEEMEKNGVNFVR KSHLEKIVKSEDDKLAITARIGDQSQTFSNFDQIVMAVGRSPRTVDLGLEDVGVELNETG HIIVDAQENTSIPGVYALGDVTTTGWELTPVAIAAGRRLADRLFNNEKEACLYYHQIPTV VFSHPPLGTIGYTEPEAIAKYGEENVKCYSSKFVNLLYSMAEDPEKKKKTCMKLVCVGSK ETVVGLHVAGDGADEMVQGFGVAMKMGATKADFDNIVAIHPTASEELVTMA // >gi|325189095|emb|FR824246.1|:subseq(22762,20821).[11518:9998].sp TATGATTACATCGTTATCGGAGGGGGAAGCGGTGGCGTAGCCTCTGCTCGACGTGCTGCA ACCTACGGGGCCAAAGTACTGCTAATTGAACGTCATCGTGAGTACGAAGGCGCGGGTTAT GGTGGTACTTGTGTGAACTATGGATGCGTCCCCAAAAAGGTGATGTATAACGCTGCAGCG CATGTGGAACACATTGAAAGAGCGCCTGATTACTCAATTCGACCATTTGCATCGAAAGGG GACACATCGCATTCTTTCTCTTTTGGTGATTTCGATTGGGGACGAATGAAAGTAAAACGT GACGCGTACATTGAGCGATTGAATGGAATTTACACTCGAAATCTAGCGAATGCAAAGATT GATACAGTGACAGGGATCGCGAAATTGATCGCTAAGGATCGCGTTCAGGTCAATCAAGAC TCTTTCTTTGAAGGAAAGCACATACTCATAGCGGTCGGAGGAACCCCAGCAATGCCATCC ATCCCCGGAATCGAGCACGCTATTGATAGCGATGGATTCTTCAAGCTGGAAACTCAACCA AAAAAAGTCGCGGTTGTGGGCGCTGGGTACATTGCTGTTGAAATAGCTGGTGTCTTTAAT ACGCTCAAGTCGGATACCTTTCTATTTTGTCGCTTTGATCAAGTATTGAGGAAATTTGAT CCGCTCGTACGGGACTTGGTCAATGAAGAGATGGAAAAGAACGGCGTGAATTTCGTCCGC AAAAGTCATTTGGAAAAGATCGTCAAGTCGGAAGACGATAAACTGGCGATTACAGCTCGC ATTGGAGATCAAAGCCAGACATTTTCTAATTTCGATCAGATTGTGATGGCGGTTGGTCGC TCGCCTCGGACAGTCGATTTGGGTCTTGAAGATGTCGGTGTCGAATTGAATGAAACGGGT CACATCATCGTCGATGCTCAAGAAAACACATCGATTCCCGGTGTCTATGCCCTCGGCGAT GTCACGACTACAGGATGGGAACTCACACCAGTTGCTATCGCTGCAGGTCGACGACTTGCA GACCGTCTATTCAACAACGAGAAAGAGGCTTGTCTGTACTACCATCAGATCCCTACTGTG GTATTCAGCCATCCTCCCCTTGGCACCATCGGATACACTGAACCAGAAGCAATTGCAAAG TATGGAGAAGAGAATGTCAAATGTTACAGCAGCAAATTTGTCAATTTACTGTATTCCATG GCCGAAGACCCCGAGAAAAAGAAGAAAACATGCATGAAACTCGTGTGTGTTGGCTCCAAA GAAACTGTTGTTGGGCTGCATGTTGCTGGCGATGGGGCCGATGAAATGGTCCAAGGATTC GGCGTCGCAATGAAAATGGGAGCCACCAAGGCTGACTTTGACAACATCGTTGCAATCCAT CCAACTGCATCGGAAGAACTGGTCACCATGGCG // gi|325189095|emb|FR824246.1|:subseq(22762,20821) GeneWise match 11518 10000 244.29 - . gi|325189095|emb|FR824246.1|:subseq(22762,20821)-genewise-prediction-1 gi|325189095|emb|FR824246.1|:subseq(22762,20821) GeneWise cds 11518 10930 0.00 - 0 gi|325189095|emb|FR824246.1|:subseq(22762,20821)-genewise-prediction-1 gi|325189095|emb|FR824246.1|:subseq(22762,20821) GeneWise intron 10929 10875 0.00 - . gi|325189095|emb|FR824246.1|:subseq(22762,20821)-genewise-prediction-1 gi|325189095|emb|FR824246.1|:subseq(22762,20821) GeneWise cds 10874 10766 0.00 - 2 gi|325189095|emb|FR824246.1|:subseq(22762,20821)-genewise-prediction-1 gi|325189095|emb|FR824246.1|:subseq(22762,20821) GeneWise intron 10765 10715 0.00 - . gi|325189095|emb|FR824246.1|:subseq(22762,20821)-genewise-prediction-1 gi|325189095|emb|FR824246.1|:subseq(22762,20821) GeneWise cds 10714 10000 0.00 - 1 gi|325189095|emb|FR824246.1|:subseq(22762,20821)-genewise-prediction-1 //