genewise output Score 16.55 bits over entire alignment Scores as bits over a synchronous coding model Warning: The bits scores is not probablistically correct for single seqs See WWW help for more info SPP00000063_1.0 452 NTILMAIGREAVTDDVG +T A+GR+AV D G STAAHAFGRQAVVDSSG PHYCAscaffold_817386 taggcgtgacggggtag ccccactggacttacgg tcttcgcggagtttgca // >PHYCAscaffold_84:subseq(86261,21487).pep STAAHAFGRQAVVDSSG // >PHYCAscaffold_84:subseq(86261,21487).[17386:17436].sp TCTACCGCTGCTCACGCGTTCGGGAGGCAAGCGGTTGTTGATTCGAGCGGA // PHYCAscaffold_84:subseq(86261,21487) GeneWise match 17386 17436 16.55 + . PHYCAscaffold_84:subseq(86261,21487)-genewise-prediction-1 PHYCAscaffold_84:subseq(86261,21487) GeneWise cds 17386 17436 0.00 + 0 PHYCAscaffold_84:subseq(86261,21487)-genewise-prediction-1 // genewise output Score 494.80 bits over entire alignment Scores as bits over a synchronous coding model Warning: The bits scores is not probablistically correct for single seqs See WWW help for more info SPP00000063_1.0 170 DHTYDLIVIGGGSGGLAAAKEASRLGKKVACLDFVKPSPQGTSWGLGGT ++ YDL+VIGGGSGGLA +KEA+ G+KV LD+VKPSPQGTSWGLGGT NYDYDLVVIGGGSGGLACSKEAASFGQKVCVLDYVKPSPQGTSWGLGGT PHYCAscaffold_-11478 atgtgcggagggtggcgttagggttgcagtgcgtgactccgattgcgga aaaaattttgggcggtcgcaaccctgaatgttaatacccagccggtggc cccctaggtccatacgcccgagctctggctaacccgggtgcgtgtagcg SPP00000063_1.0 219 CVNVGCIPKKLMHQASLLGHSIH-DAKKYGWKLPEGK---VEHQWNHLR CVNVGCIPKKLMHQ+SL+G IH D +GW L G W L CVNVGCIPKKLMHQSSLIGEVIHHDGANFGWNLSSGDGNAPTFNWKQLV PHYCAscaffold_-11331 tgaggtacaacaccatcagggaccgggatgtacttgggagcatatactg gtatggtcaattaagcttgattaaagcatggatccgagaccctagaatt tctcccccggcgcactatcgccctcctctcgttgtgtactattcggggg SPP00000063_1.0 264 DSVQDHIASLNWGYRVQLREKTVTYINSYGEFTGPFEISATNKKKKVEK +V +I S+N+ Y+V+LR K V Y N G F P + + +K ++ SNVDGYIKSINFKYKVELRSKYVKYENFLGSFVNPHTLELWHPRKGTKQ PHYCAscaffold_-11184 tagggtaaaaatataggccaatgatgatcgttgaccatgttcccagaac catagatagtataaatatggaataaaattgcttacactatgacgagcaa gcgcgccaccccgcgggactgctgcgccgctctcccaggggctcgcagg SPP00000063_1.0 313 LTADRFLISTGLRPKYPEIPGVKEYTITSDDLFQLPYS-PGKTLCVGAS +T +I+ G RPK PG E+ I+SDD+F + PGKTL VGAS ITTRDVVIAVGGRPKELTCPG-GEHAISSDDIFWMKKKEPGKTLVVGAS PHYCAscaffold_-11037 aaacgggaggggccagtatcg ggcgataggattaaaagcgaacggggt tccgatttctgggcaatcgcg gaactcgaattgtaaaacgactttgcc ctattgctttttacgggctat agtgtgtcttcgggaggacgttgtccg SPP00000063_1.0 361 YVSLECAGFLHGFGFDVTVMVRSILLRGFDQDMAERIRKHM-IAYGMKF YV+LECAGFL G+G+DV VMVRSILLRGFDQDMA++I ++M + G++F YVALECAGFLKGMGYDVKVMVRSILLRGFDQDMADKIGEYMEVQSGIEF PHYCAscaffold_-10893 tggcgtggtcagagtggagagctatccgtgcgaggaaggtaggctgagt atctagcgttagtgaatatttgctttggtaaatcaatgaatatacgtat cgcggtaccggcgcctggggcactgttcccgcgccgtcgcggggattgc SPP00000063_1.0 409 -EAGVPTRIEQIDEKTDEKAGKYRVFWPKKNEETGEMQEVSEEYNTILM VP I +++ G+ V W E GE E E ++T+L IRKTVPQSITKLEN------GQLLVKW---TSEDGESCE--EAFDTVLN PHYCAscaffold_-10746 acaagcctaaacga gcccgat aaggggatg ggtgagca tgactcactcataa gatttag cgaagagga actactta tggaaggccgacgc tgcgagg acacagttg atcttgtc SPP00000063_1.0 457 AIGREAVTDDVGLTTIGVE-RAKSKKVLGRREQSTTIPWVYAIGDVLEG A GR+ + L GV+ KS ++ + EQ++T P +YAIGDV++ ATGRDPDVAKLNLDKAGVKLNEKSGRIWVKNEQTST-PNIYAIGDVID- PHYCAscaffold_-10632 gagcgcgggacacgagggacagatgcatgaagcata caatgagggag ccggacatcatataacgtataaacggtgtaaaaccc catactgatta ttcttttggggcgcgtagggtggtaccgggcggggg cctccttttcc SPP00000063_1.0 505 TPELTPVAIQAGRVLMRRIFDGANELTEYDQIPTTVFTPLEYGCCGLSE PELTPVAIQAGR+L RR+++ + +Y+++ T VFTP+EYGCCG+SE APELTPVAIQAGRLLSRRLYNNSTVQMDYEKVCTAVFTPIEYGCCGMSE PHYCAscaffold_-10491 gcgcacggacggctctccttaatagcagtgagtaggtacagtgttgatg ccatcctctacggttcggtaaacctataaaatgccttcctaaggggtca gaacgtcctgtaagtgttgctcgggggccgggcaagtttcgcgctcggg SPP00000063_1.0 554 EDAMMKYGKDNIIIYHNVFNPLEYTIS--ERMDKDHCYLKMICLRNEEE ED+ ++G+DNI +YH F PLE+++S R + CYLK+IC + ++ EDSKERFGEDNIEVYHTNFVPLEWSLSTDTRTAAESCYLKVICDKTRDK PHYCAscaffold_-10344 ggaagctgggaaggtcaatgccgttttagacagggttttagatgaacga aagaagtgaaatataacattctagctccacgcccacgatattgaacgaa gccagctagcccgtccgctgggggggggcgcaaaggtcgggctcagttg SPP00000063_1.0 601 KVVGFHILTPNAGEVTQGFGIALKLAAKKADFDRLIGIHPTVAENFTTL VVGFH L PNAGEVTQ +G+A+KL + +GIHPT AE+FTTL FVVGFHYLGPNAGEVTQAMGLAMKLGFTYDQMVDTVGIHPTTAESFTTL PHYCAscaffold_-10197 tgggtctcgcaggggacgagtgaatgtatgcaggaggaccaaggttaac tttgtaatgcacgatcactgtctatgtcaaattactgtaccccactcct cggcctctagttcggtacgggcgggccgccagttccctcgggcggcgtg SPP00000063_1.0 650 TLEKKEG + K G EVTKSSG PHYCAscaffold_-10050 ggaaaag atcaggg ggggctt // >PHYCAscaffold_84:subseq(86261,21487).pep NYDYDLVVIGGGSGGLACSKEAASFGQKVCVLDYVKPSPQGTSWGLGGTCVNVGCIPKKL MHQSSLIGEVIHHDGANFGWNLSSGDGNAPTFNWKQLVSNVDGYIKSINFKYKVELRSKY VKYENFLGSFVNPHTLELWHPRKGTKQITTRDVVIAVGGRPKELTCPGGEHAISSDDIFW MKKKEPGKTLVVGASYVALECAGFLKGMGYDVKVMVRSILLRGFDQDMADKIGEYMEVQS GIEFIRKTVPQSITKLENGQLLVKWTSEDGESCEEAFDTVLNATGRDPDVAKLNLDKAGV KLNEKSGRIWVKNEQTSTPNIYAIGDVIDAPELTPVAIQAGRLLSRRLYNNSTVQMDYEK VCTAVFTPIEYGCCGMSEEDSKERFGEDNIEVYHTNFVPLEWSLSTDTRTAAESCYLKVI CDKTRDKFVVGFHYLGPNAGEVTQAMGLAMKLGFTYDQMVDTVGIHPTTAESFTTLEVTK SSG // >PHYCAscaffold_84:subseq(86261,21487).[11478:10028].sp AACTACGACTACGATCTAGTGGTGATTGGCGGCGGATCTGGAGGCCTGGCCTGCTCCAAG GAAGCGGCCTCTTTCGGTCAGAAGGTCTGTGTACTAGACTACGTCAAGCCGTCGCCTCAG GGCACGTCTTGGGGTCTAGGGGGCACGTGTGTCAATGTCGGCTGCATCCCCAAGAAGCTC ATGCACCAAAGCTCTCTAATTGGCGAGGTCATCCACCATGACGGCGCTAACTTTGGCTGG AATCTTTCGTCTGGGGATGGAAACGCTCCAACTTTTAACTGGAAGCAGTTGGTGTCGAAC GTGGACGGGTACATCAAAAGCATCAACTTCAAGTACAAGGTGGAGCTACGCAGTAAGTAC GTTAAGTACGAGAACTTCCTGGGCTCTTTCGTTAACCCCCACACATTGGAGTTGTGGCAC CCTCGCAAGGGCACAAAGCAGATCACTACACGTGATGTGGTCATTGCTGTTGGTGGTCGA CCCAAGGAGTTGACCTGTCCAGGTGGAGAGCATGCGATTTCGAGTGACGATATTTTCTGG ATGAAGAAAAAGGAGCCAGGCAAGACTCTTGTGGTTGGCGCCTCGTACGTGGCCCTGGAG TGTGCAGGCTTCCTGAAGGGCATGGGCTACGATGTGAAGGTGATGGTCCGATCCATTTTG CTTCGTGGCTTCGACCAGGACATGGCCGACAAGATTGGCGAGTACATGGAGGTGCAGTCA GGTATTGAGTTCATTCGGAAGACAGTACCGCAGTCCATCACGAAACTCGAGAACGGTCAG CTCCTGGTAAAGTGGACAAGCGAAGACGGAGAGAGTTGTGAGGAAGCTTTCGATACTGTG CTTAACGCTACTGGCCGTGATCCTGATGTGGCGAAGCTGAACCTGGACAAGGCTGGAGTG AAGCTGAATGAGAAGTCTGGACGCATCTGGGTGAAGAACGAGCAGACGTCGACGCCCAAC ATTTACGCCATTGGTGATGTTATCGACGCGCCAGAACTCACGCCTGTCGCCATTCAGGCT GGACGATTGCTTTCGCGTCGTTTGTACAATAACTCGACGGTGCAGATGGACTACGAGAAG GTGTGCACAGCAGTGTTTACTCCTATCGAGTACGGGTGCTGTGGCATGTCGGAGGAGGAC AGCAAAGAGCGCTTTGGAGAGGACAACATCGAGGTTTACCACACGAACTTTGTGCCGCTG GAGTGGTCGTTGTCGACGGACACGCGCACAGCAGCAGAGTCGTGTTACTTGAAGGTGATC TGTGACAAAACGCGTGATAAGTTCGTGGTGGGCTTCCATTACCTTGGACCGAATGCTGGC GAGGTGACTCAAGCCATGGGGTTGGCCATGAAGTTGGGCTTCACGTACGACCAAATGGTT GATACCGTCGGCATTCACCCGACGACGGCCGAGTCGTTCACGACTCTGGAGGTGACGAAG AGCAGTGGT // PHYCAscaffold_84:subseq(86261,21487) GeneWise match 11478 10030 505.79 - . PHYCAscaffold_84:subseq(86261,21487)-genewise-prediction-1 PHYCAscaffold_84:subseq(86261,21487) GeneWise cds 11478 10030 0.00 - 0 PHYCAscaffold_84:subseq(86261,21487)-genewise-prediction-1 //