genewise output Score 400.35 bits over entire alignment Scores as bits over a synchronous coding model Warning: The bits scores is not probablistically correct for single seqs See WWW help for more info SPP00000063_1.0 174 DLIVIGGGSGGLAAAKEASRLGKKVACLDFVKPSPQGTSWGLGGTCVNV DL+VIGGGSGGLAAAKEA+RLG KV C D+V+PSPQG+ WGLGGTCVNV DLVVIGGGSGGLAAAKEAARLGAKVVCFDYVEPSPQGSKWGLGGTCVNV gi|338242564|gb 9967 gtggagggaggtgggagggacggaggttgtggctccgtatgcggatgag attttggggggtcccaaccgtgcattgtaatacccagcaggtggcgtat tgggtccgtccggagggggggtcgcgttctgggaggtcggtgcggtgct SPP00000063_1.0 223 GCIPKKLMHQASLLGHSI-HDAKKYGWKLPEGKVEHQWNHLRDSVQDHI GCIPK +MH ++ LG + H A GW +G W L +VQ +I GCIPKIIMHNSAKLGQLMDHSAAPLGWSGTDG-LTFVWQDLVKTVQLYI gi|338242564|gb10114 gtacaaaacatgatgctagctggccgtagagg catgtcgcgaagccta ggtcatttaaccatgattaacccctggggcag tcttgaattactatat tctggccgccgcggaaggctagcatcgtttct gaccggcgaggtatcc SPP00000063_1.0 271 ASLNWGYRVQLREKTVTYINSYGEF-TGPFEISATNKKKKVEKLT---- LN+ YR LR V YIN+ + P + K +V + T KQLNFSYRRGLRSAGVEYINAKATLLAAPERAQSGAKSGRVVEYTLKGE gi|338242564|gb10258 accatttccgccaggggtaagagaccggcgagctggatgcgggtacagg aatatcagggtggcgtaatacaccttcccagcacgcacggttaactaga gatccacatctccctagttctatacccccgacggccgttagggtacgcg SPP00000063_1.0 315 -----ADRFLISTGLRPKYP-EIPGVKEYTITSDDLFQLPYSPGKTLCV A L++ G RP P +PG E +TSDDLF L P KTL V RKEVRAKCVLVAVGGRPYIPRDVPGAVELAVTSDDLFSLSREPKKTLVV gi|338242564|gb10405 caggcgatgtgggggcctaccggcggggtggaaggttattcgcaaatgg gaatgcagtttctgggcatcgatcgctatctcgaattgtcgacaacttt gggggggttgacgtaggctagctctgtggcggttcgttagcggggtggg SPP00000063_1.0 358 GASYVSLECAGFLHGFGFDVTVMVRSILLRGFDQDMAERIRKHMIAYGM GASY++LECAGFL + +DVTV VRSI+LRGFD+ AE I+ M G GASYIALECAGFLTHLRYDVTVCVRSIVLRGFDRQCAEHIQLVMKEQGT gi|338242564|gb10552 ggttagcgtggtcaccctggagtgctagccgtgcctggcactgaagcga gccatctagcgttcatgaatctgtgctttggtagagcaatatttaaagc tggctaagcggcgacgtttacgtaccagtctccagtgaccgggggaacc SPP00000063_1.0 407 KF---EAGVPT-RIEQIDEKTDEKAGKYRVFWPKKNEETGEMQEV---- KF E V R+ + D + AG G + + KFLEHEQVVSLQRVGEPDVAASDLAGDRGADTTSNTTADGGDKILVRFA gi|338242564|gb10699 atcgcgcggtcccgggcggggagcgggcgggaataaagggggaacgctg attaaaattctagtgacatccgatcgaggcacccacccaggaatttgtc gcgacaaaggaacgcggtgctccacactggtggctgccctccgcccgca SPP00000063_1.0 448 ---SEEYNTILMAIGREAVTDDVGLTTIGVER--AKSKKVLGRREQSTT E ++T++ A+GR A T +G G+ A K V+ EQ T+ SGREEMFDTVVYAVGRRACTQSLGCEAAGIAMHPASGKIVVDELEQ-TS gi|338242564|gb10846 tgcggatgaggtgggccgtacacgtggggagaccgtgaaggggcgc at cggaattacttactgggcgcagtggaccgtctacccgatttaataa cc cacaagccagccccgccaccatcccgcccccgccatcgtgccgaga tc SPP00000063_1.0 492 IPWVYAIGDVLEGTPELTPVAIQAGRVLMRRIFDGANELTEYDQIPTTV P VYAIGDV G PELTPVAI+AG +L RR+F GANE Y IPT V APGVYAIGDVCHGRPELTPVAIKAGELLARRLFGGANEPMVYTNIPTVV gi|338242564|gb10990 gcggtgagggtcgccgcacggaagggtcgacctgggagcagtaaacagg ccgtactgatgaggcatcctctacgattcggttggcaacttacatcctt actccctacctcccgaatctccgccagccgcctacccacgtcatacgtc SPP00000063_1.0 541 FTPLEYGCCGLSEEDAMMKYGKDNIIIYHNVFNPLEY----------TI FTP+EYGCCGLSEEDA+ +YG+DNI ++ FN + T FTPIEYGCCGLSEEDAITRYGQDNIEVFLFGFNSVPVSACHWKKALSTR gi|338242564|gb11137 tacagtgttgctggggaaatgcgaaggtctgtatgcgtgtctaagctac tcctaaggggtcaaactcgagaaatattttgtactctccgagaactccg ccaaatcccattaatccgactactcggcccccctgctcttcgagacacc SPP00000063_1.0 580 SERMDKDHCYL---KMICLRNEEEKVVGFHILTPN + +D D L K+IC + + K+VG+H + N KDEFDLDVTPLNLSKIIC-KKPDNKIVGYHCIAMN gi|338242564|gb11284 aggtgcggaccacaaaat aacgaaaggtctagaa aaatatatcctatgattg aacaaattgaagtcta acatcgtcccttccaccc gatccactctccccgc SPP00000063_1.0 612 AGEVTQGFGIALKLAAKKADFDRLIG AGE TQG+ +ALK K D+D ++G AGETTQGYALALKCGLTKDDLDAVVG gi|338242564|gb11386 GTAAGCG Intron 1 TAGgggaacgtgtgcatgtaaggtggggg <0-----[11386:11508]-0>cgaccagactctaggtcaaatacttg tagaggtcgggggtggcgctgcacgt SPP00000063_1.0 638 IHPTVAENFTTLTLEKKEGDEELQASGCXG IHPT AE+F ++T+ ++ G+ + A GC G IHPTDAESFHSMTITRRSGESFMAAGGCGG gi|338242564|gb11587 accagggttctaaaaccaggataggggtgg taccacactactctcggggagttccggggg ccgtcaggccaggcttcccatcgtttcctt // >gi|338242564|gb|AFNH01001883.1|:subseq(2496,17000).pep DLVVIGGGSGGLAAAKEAARLGAKVVCFDYVEPSPQGSKWGLGGTCVNVGCIPKIIMHNS AKLGQLMDHSAAPLGWSGTDGLTFVWQDLVKTVQLYIKQLNFSYRRGLRSAGVEYINAKA TLLAAPERAQSGAKSGRVVEYTLKGERKEVRAKCVLVAVGGRPYIPRDVPGAVELAVTSD DLFSLSREPKKTLVVGASYIALECAGFLTHLRYDVTVCVRSIVLRGFDRQCAEHIQLVMK EQGTKFLEHEQVVSLQRVGEPDVAASDLAGDRGADTTSNTTADGGDKILVRFASGREEMF DTVVYAVGRRACTQSLGCEAAGIAMHPASGKIVVDELEQTSAPGVYAIGDVCHGRPELTP VAIKAGELLARRLFGGANEPMVYTNIPTVVFTPIEYGCCGLSEEDAITRYGQDNIEVFLF GFNSVPVSACHWKKALSTRKDEFDLDVTPLNLSKIICKKPDNKIVGYHCIAMNAGETTQG YALALKCGLTKDDLDAVVGIHPTDAESFHSMTITRRSGESFMAAGGCGG // >gi|338242564|gb|AFNH01001883.1|:subseq(2496,17000).[9967:11676].sp GATTTGGTGGTGATTGGCGGCGGGAGTGGCGGCTTGGCGGCAGCGAAGGAGGCGGCGAGG CTGGGTGCCAAGGTCGTGTGTTTTGACTATGTGGAGCCGTCACCGCAGGGTTCCAAGTGG GGTCTGGGCGGGACGTGTGTGAACGTTGGTTGCATTCCGAAGATCATCATGCACAACTCG GCCAAGTTGGGACAATTGATGGACCATTCAGCGGCCCCACTTGGCTGGAGTGGTACTGAC GGTCTGACATTCGTCTGGCAGGACCTGGTAAAGACGGTTCAACTTTACATCAAGCAACTT AACTTCTCATACCGACGTGGCCTTCGCAGCGCCGGTGTAGAGTATATTAACGCTAAAGCT ACACTCCTCGCCGCCCCCGAGAGAGCCCAGTCGGGCGCCAAGTCTGGTCGAGTGGTGGAG TATACACTCAAGGGCGAGCGGAAGGAGGTGCGGGCGAAGTGTGTTTTGGTAGCCGTGGGT GGACGGCCGTACATTCCACGGGACGTTCCCGGTGCGGTTGAGTTGGCCGTGACGAGTGAT GACTTGTTTAGTTTATCGCGCGAGCCGAAGAAGACTTTGGTGGTGGGTGCGTCGTACATT GCACTAGAGTGCGCGGGGTTCCTGACACACCTGCGTTATGATGTAACCGTGTGTGTACGC TCCATAGTGCTTCGCGGTTTCGACCGACAGTGTGCGGAACACATCCAGTTGGTGATGAAG GAACAAGGCACCAAGTTCCTGGAACACGAACAAGTAGTGTCGCTACAACGCGTGGGCGAG CCGGATGTGGCCGCTAGCGACCTAGCCGGAGACCGTGGGGCGGATACGACGTCCAATACG ACCGCCGACGGTGGCGACAAGATCCTCGTCCGGTTCGCATCCGGACGCGAAGAAATGTTC GACACAGTGGTCTACGCCGTCGGGCGCCGCGCATGCACCCAAAGTCTCGGCTGCGAGGCC GCCGGCATCGCCATGCACCCCGCATCTGGCAAGATTGTGGTCGACGAGCTAGAGCAAACT TCCGCACCCGGTGTCTACGCCATTGGAGACGTCTGTCACGGCCGCCCGGAACTAACTCCC GTTGCCATCAAGGCCGGCGAATTGCTCGCCAGGCGCCTCTTTGGAGGCGCCAACGAACCC ATGGTTTACACAAATATACCCACGGTTGTCTTCACCCCAATAGAATATGGCTGCTGCGGA CTTTCTGAAGAAGATGCCATCACGAGATACGGTCAAGACAATATCGAGGTGTTCCTCTTC GGCTTCAACTCTGTGCCCGTTTCCGCTTGTCACTGGAAAAAGGCACTCTCAACCCGCAAA GACGAATTTGACCTGGATGTCACCCCCCTTAATCTCAGCAAAATCATCTGCAAGAAACCT GACAACAAAATCGTTGGCTATCACTGCATCGCCATGAACGCTGGAGAGACAACGCAGGGT TACGCGTTGGCGCTGAAGTGTGGGTTGACCAAGGACGATTTGGACGCAGTCGTGGGTATC CACCCGACTGACGCAGAGTCGTTCCACTCAATGACGATCACTCGTCGCAGCGGCGAAAGT TTCATGGCTGCTGGTGGCTGCGGTGGT // gi|338242564|gb|AFNH01001883.1|:subseq(2496,17000) GeneWise match 9967 11676 428.30 + . gi|338242564|gb|AFNH01001883.1|:subseq(2496,17000)-genewise-prediction-1 gi|338242564|gb|AFNH01001883.1|:subseq(2496,17000) GeneWise cds 9967 11385 0.00 + 0 gi|338242564|gb|AFNH01001883.1|:subseq(2496,17000)-genewise-prediction-1 gi|338242564|gb|AFNH01001883.1|:subseq(2496,17000) GeneWise intron 11386 11508 0.00 + . gi|338242564|gb|AFNH01001883.1|:subseq(2496,17000)-genewise-prediction-1 gi|338242564|gb|AFNH01001883.1|:subseq(2496,17000) GeneWise cds 11509 11676 0.00 + 0 gi|338242564|gb|AFNH01001883.1|:subseq(2496,17000)-genewise-prediction-1 // genewise output Score 18.91 bits over entire alignment Scores as bits over a synchronous coding model Warning: The bits scores is not probablistically correct for single seqs See WWW help for more info SPP00000063_1.0 229 LMHQASLLGHSIHD ++HQ S LG +HD MVHQLSQLGRVVHD gi|338242564|g-10173 agccttccgcggcg ttaatcatggttaa gctagcatcatgtt // >gi|338242564|gb|AFNH01001883.1|:subseq(2496,17000).pep MVHQLSQLGRVVHD // >gi|338242564|gb|AFNH01001883.1|:subseq(2496,17000).[10173:10130].sp ATGGTCCATCAATTGTCCCAACTTGGCCGAGTTGTGCATGAT // gi|338242564|gb|AFNH01001883.1|:subseq(2496,17000) GeneWise match 10173 10132 18.91 - . gi|338242564|gb|AFNH01001883.1|:subseq(2496,17000)-genewise-prediction-1 gi|338242564|gb|AFNH01001883.1|:subseq(2496,17000) GeneWise cds 10173 10132 0.00 - 0 gi|338242564|gb|AFNH01001883.1|:subseq(2496,17000)-genewise-prediction-1 //