genewise output Score 15.96 bits over entire alignment Scores as bits over a synchronous coding model Warning: The bits scores is not probablistically correct for single seqs See WWW help for more info gi|323451867|gb 349 RLARRLFGGKTEPM-DYECVATTIFTPLEY R+A+ L+G E + E + T F PL Y RVAQELWGSVEEALRALETLLTHYFVPLAY PHYCAscaffold_816472 cggcgctgaggggtcgcgaccacttgccgt gtcaatgggtaactgctacttcaattctca ggaggtgacgaacaatcgatctctttcggc // >PHYCAscaffold_84:subseq(86261,21487).pep RVAQELWGSVEEALRALETLLTHYFVPLAY // >PHYCAscaffold_84:subseq(86261,21487).[16472:16561].sp CGGGTGGCACAGGAGCTTTGGGGAAGCGTGGAAGAAGCCTTACGAGCTCTCGAGACACTT CTCACTCACTATTTTGTTCCCCTGGCGTAC // PHYCAscaffold_84:subseq(86261,21487) GeneWise match 16472 16561 15.96 + . PHYCAscaffold_84:subseq(86261,21487)-genewise-prediction-1 PHYCAscaffold_84:subseq(86261,21487) GeneWise cds 16472 16561 0.00 + 0 PHYCAscaffold_84:subseq(86261,21487)-genewise-prediction-1 // genewise output Score 531.60 bits over entire alignment Scores as bits over a synchronous coding model Warning: The bits scores is not probablistically correct for single seqs See WWW help for more info gi|323451867|gb 8 KEHGFDYDVVVVGGGSGGLACSKECAKLGAKVAVLDFVKPSPAGSTWGL +E +DYD+VV+GGGSGGLACSKE A G KV VLD+VKPSP G++WGL EETNYDYDLVVIGGGSGGLACSKEAASFGQKVCVLDYVKPSPQGTSWGL PHYCAscaffold_-11487 ggaatgtgcggagggtggcgttagggttgcagtgcgtgactccgattgc aacaaaaattttgggcggtcgcaaccctgaatgttaatacccagccggt agccccctaggtccatacgcccgagctctggctaacccgggtgcgtgta gi|323451867|gb 57 GGTCVNVGCIPKKLMHTASIIGETLKDDAAAFGWK----DAAAGAHDWE GGTCVNVGCIPKKLMH +S+IGE + D A FGW D A +W+ GGTCVNVGCIPKKLMHQSSLIGEVIHHDGANFGWNLSSGDGNAPTFNWK PHYCAscaffold_-11340 ggatgaggtacaacaccatcagggaccgggatgtacttgggagcatata ggcgtatggtcaattaagcttgattaaagcatggatccgagaccctaga gcgtctcccccggcgcactatcgccctcctctcgttgtgtactattcgg gi|323451867|gb 102 SMKSTVQDHIKSLNFKYRVALREAGITYLNRLGEFEDKNTISLTDKKGN + S V +IKS+NFKY+V LR + Y N LG F + +T+ L + QLVSNVDGYIKSINFKYKVELRSKYVKYENFLGSFVNPHTLELWHPRKG PHYCAscaffold_-11193 ctgtagggtaaaaatataggccaatgatgatcgttgaccatgttcccag attcatagatagtataaatatggaataaaattgcttacactatgacgag ggggcgcgccaccccgcgggactgctgcgccgctctcccaggggctcgc gi|323451867|gb 151 KTSVTAARFIVAVGGRPNKLGCPGGEHAIDSDDLFSL-PKAPGRVLCVG +T ++AVGGRP +L CPGGEHAI SDD+F + K PG+ L VG TKQITTRDVVIAVGGRPKELTCPGGEHAISSDDIFWMKKKEPGKTLVVG PHYCAscaffold_-11046 aacaaacgggaggggccagtatcgggcgataggattaaaagcgaacggg caatccgatttctgggcaatcgcggaactcgaattgtaaaacgactttg aggctattgctttttacgggctatagtgtgtcttcgggaggacgttgtc gi|323451867|gb 199 GGYIALECGGFTAGMGYPTTCMVRSILLRGFDRECVGKIEAHIK-HHGV Y+ALEC GF GMGY MVRSILLRGFD++ KI +++ G+ ASYVALECAGFLKGMGYDVKVMVRSILLRGFDQDMADKIGEYMEVQSGI PHYCAscaffold_-10899 gttggcgtggtcagagtggagagctatccgtgcgaggaaggtaggctga ccatctagcgttagtgaatatttgctttggtaaatcaatgaatatacgt cgcgcggtaccggcgcctggggcactgttcccgcgccgtcgcggggatt gi|323451867|gb 247 QLQVGVTPAKIEKDAATGVLTV---TDSGGGVHE-YDTVLVATGRYADT + P I K G L V + G E +DTVL ATGR D EFIRKTVPQSITK-LENGQLLVKWTSEDGESCEEAFDTVLNATGRDPDV PHYCAscaffold_-10752 gtacaagcctaaa cgagcccgataaggggatgggtgagcagagcgcgg attgactcactca taagatttagcgaagaggaactacttaccggacat gctggaaggccga cgctgcgaggacacagttgatcttgtcttcttttg gi|323451867|gb 292 AALGIDNVPGASANVNAKTKKLECVDEQLPGAPHVYAIGDVVEGRPELT A L +D A +N K+ ++ +EQ P++YAIGDV++ PELT AKLNLDK---AGVKLNEKSGRIWVKNEQT-STPNIYAIGDVIDA-PELT PHYCAscaffold_-10608 gacacga gggacagatgcatgaagca tacaatgagggagg cgca catataa cgtataaacggtgtaaaac cccatactgattac catc gggcgcg tagggtggtaccgggcggg ggcctccttttccg aacg gi|323451867|gb 341 PVAIEAGLRLARRLFGGKTEPMDYECVATTIFTPLEYGTIGLSEDDAKA PVAI+AG L+RRL+ T MDYE V T +FTP+EYG G+SE+D+K PVAIQAGRLLSRRLYNNSTVQMDYEKVCTAVFTPIEYGCCGMSEEDSKE PHYCAscaffold_-10476 cggacggctctccttaatagcagtgagtaggtacagtgttgatgggaag ctctacggttcggtaaacctataaaatgccttcctaaggggtcaaagaa tcctgtaagtgttgctcgggggccgggcaagtttcgcgctcggggccag gi|323451867|gb 390 QLGECNVESYISEFAPLEYALSETRSERGDGCFAKLVVDKSTGK-VVGF + GE N+E Y + F PLE++LS + C+ K++ DK+ K VVGF RFGEDNIEVYHTNFVPLEWSLSTDTRTAAESCYLKVICDKTRDKFVVGF PHYCAscaffold_-10329 ctgggaaggtcaatgccgttttagacagggttttagatgaacgatgggt gtgaaatataacattctagctccacgcccacgatattgaacgaatttgt ctagcccgtccgctgggggggggcgcaaaggtcgggctcagttgcggcc gi|323451867|gb 438 HYLGPNAGEITQGFSIAMRKGATYADFISTVGIHPTVAEEFTSMTVTKS HYLGPNAGE+TQ + +AM+ G TY ++ TVGIHPT AE FT++ VTKS HYLGPNAGEVTQAMGLAMKLGFTYDQMVDTVGIHPTTAESFTTLEVTKS PHYCAscaffold_-10182 ctcgcaggggacgagtgaatgtatgcaggaggaccaaggttaacggaaa aatgcacgatcactgtctatgtcaaattactgtaccccactcctatcag tctagttcggtacgggcgggccgccagttccctcgggcggcgtgggggc gi|323451867|gb 487 SGESAAKGGC SG + GGC SGGATTGGGC PHYCAscaffold_-10035 agggaagggt gggcccgggg ttagctcgtc // >PHYCAscaffold_84:subseq(86261,21487).pep EETNYDYDLVVIGGGSGGLACSKEAASFGQKVCVLDYVKPSPQGTSWGLGGTCVNVGCIP KKLMHQSSLIGEVIHHDGANFGWNLSSGDGNAPTFNWKQLVSNVDGYIKSINFKYKVELR SKYVKYENFLGSFVNPHTLELWHPRKGTKQITTRDVVIAVGGRPKELTCPGGEHAISSDD IFWMKKKEPGKTLVVGASYVALECAGFLKGMGYDVKVMVRSILLRGFDQDMADKIGEYME VQSGIEFIRKTVPQSITKLENGQLLVKWTSEDGESCEEAFDTVLNATGRDPDVAKLNLDK AGVKLNEKSGRIWVKNEQTSTPNIYAIGDVIDAPELTPVAIQAGRLLSRRLYNNSTVQMD YEKVCTAVFTPIEYGCCGMSEEDSKERFGEDNIEVYHTNFVPLEWSLSTDTRTAAESCYL KVICDKTRDKFVVGFHYLGPNAGEVTQAMGLAMKLGFTYDQMVDTVGIHPTTAESFTTLE VTKSSGGATTGGGC // >PHYCAscaffold_84:subseq(86261,21487).[11487:10004].sp GAAGAGACCAACTACGACTACGATCTAGTGGTGATTGGCGGCGGATCTGGAGGCCTGGCC TGCTCCAAGGAAGCGGCCTCTTTCGGTCAGAAGGTCTGTGTACTAGACTACGTCAAGCCG TCGCCTCAGGGCACGTCTTGGGGTCTAGGGGGCACGTGTGTCAATGTCGGCTGCATCCCC AAGAAGCTCATGCACCAAAGCTCTCTAATTGGCGAGGTCATCCACCATGACGGCGCTAAC TTTGGCTGGAATCTTTCGTCTGGGGATGGAAACGCTCCAACTTTTAACTGGAAGCAGTTG GTGTCGAACGTGGACGGGTACATCAAAAGCATCAACTTCAAGTACAAGGTGGAGCTACGC AGTAAGTACGTTAAGTACGAGAACTTCCTGGGCTCTTTCGTTAACCCCCACACATTGGAG TTGTGGCACCCTCGCAAGGGCACAAAGCAGATCACTACACGTGATGTGGTCATTGCTGTT GGTGGTCGACCCAAGGAGTTGACCTGTCCAGGTGGAGAGCATGCGATTTCGAGTGACGAT ATTTTCTGGATGAAGAAAAAGGAGCCAGGCAAGACTCTTGTGGTTGGCGCCTCGTACGTG GCCCTGGAGTGTGCAGGCTTCCTGAAGGGCATGGGCTACGATGTGAAGGTGATGGTCCGA TCCATTTTGCTTCGTGGCTTCGACCAGGACATGGCCGACAAGATTGGCGAGTACATGGAG GTGCAGTCAGGTATTGAGTTCATTCGGAAGACAGTACCGCAGTCCATCACGAAACTCGAG AACGGTCAGCTCCTGGTAAAGTGGACAAGCGAAGACGGAGAGAGTTGTGAGGAAGCTTTC GATACTGTGCTTAACGCTACTGGCCGTGATCCTGATGTGGCGAAGCTGAACCTGGACAAG GCTGGAGTGAAGCTGAATGAGAAGTCTGGACGCATCTGGGTGAAGAACGAGCAGACGTCG ACGCCCAACATTTACGCCATTGGTGATGTTATCGACGCGCCAGAACTCACGCCTGTCGCC ATTCAGGCTGGACGATTGCTTTCGCGTCGTTTGTACAATAACTCGACGGTGCAGATGGAC TACGAGAAGGTGTGCACAGCAGTGTTTACTCCTATCGAGTACGGGTGCTGTGGCATGTCG GAGGAGGACAGCAAAGAGCGCTTTGGAGAGGACAACATCGAGGTTTACCACACGAACTTT GTGCCGCTGGAGTGGTCGTTGTCGACGGACACGCGCACAGCAGCAGAGTCGTGTTACTTG AAGGTGATCTGTGACAAAACGCGTGATAAGTTCGTGGTGGGCTTCCATTACCTTGGACCG AATGCTGGCGAGGTGACTCAAGCCATGGGGTTGGCCATGAAGTTGGGCTTCACGTACGAC CAAATGGTTGATACCGTCGGCATTCACCCGACGACGGCCGAGTCGTTCACGACTCTGGAG GTGACGAAGAGCAGTGGTGGAGCGACCACTGGCGGGGGTTGC // PHYCAscaffold_84:subseq(86261,21487) GeneWise match 11487 10006 538.59 - . PHYCAscaffold_84:subseq(86261,21487)-genewise-prediction-1 PHYCAscaffold_84:subseq(86261,21487) GeneWise cds 11487 10006 0.00 - 0 PHYCAscaffold_84:subseq(86261,21487)-genewise-prediction-1 //