TBLASTN 2.2.13 [Nov-27-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= gi|74761781|sp|Q9NX07.1|TSAP1_HUMAN RecName: Full=tRNA
selenocysteine 1-associated protein 1; AltName: Full=SECp43; AltName:
Full=tRNA selenocysteine-associated protein 1
         (287 letters)

Database: I.multifiliis_strain_G5/genome.fa 
           2017 sequences; 48,799,969 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|340502518|gb|GL984173.1| Ichthyophthirius multifiliis unplace...    47   3e-05

>gi|340502518|gb|GL984173.1| Ichthyophthirius multifiliis unplaced
             genomic scaffold scaff_1120509251212, whole genome shotgun
             sequence
          Length = 78614

 Score = 46.6 bits (109), Expect = 3e-05
 Identities = 28/78 (35%), Positives = 50/78 (64%), Gaps = 1/78 (1%)
 Frame = -1

Query: 98    LFVGDLTPDVDDGMLYEFFVKVYPSCRGGKVVLDQ-TGVSKGYGFVKFTDELEQKRALTE 156
             ++VG+L   +++  L E F   YPS  G K+++D  T +S+G+GFVKF++  E  +A+ E
Sbjct: 30170 VYVGELELGINE**LAEHFRVKYPSVIGSKIIIDP*TKMSRGFGFVKFSNP*EGLKAI*E 29991

Query: 157   CQGAVGLGSKPVRLSVAI 174
               G++  G K +++S A+
Sbjct: 29990 MNGSLFRG-KYIKVSNAV 29940


  Database: I.multifiliis_strain_G5/genome.fa
    Posted date:  Nov 21, 2011  7:46 PM
  Number of letters in database: 48,799,969
  Number of sequences in database:  2017
  
Lambda     K      H
   0.317    0.135    0.406 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,728,961
Number of Sequences: 2017
Number of extensions: 101906
Number of successful extensions: 127
Number of sequences better than 1.0e-04: 1
Number of HSP's better than  0.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 102
Number of HSP's gapped (non-prelim): 27
length of query: 287
length of database: 16,266,656
effective HSP length: 102
effective length of query: 185
effective length of database: 16,060,922
effective search space: 2971270570
effective search space used: 2971270570
frameshift window, decay const: 40,  0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 105 (45.1 bits)
