TBLASTN 2.2.13 [Nov-27-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= SPP00000073_1.0
         (448 letters)

Database: G.niphandrodes/genome.fa 
           3680 sequences; 15,362,869 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|338242902|gb|AFNH01001714.1| Gregarina niphandrodes asmbl.251...    36   0.024
gi|338239606|gb|AFNH01003363.1| Gregarina niphandrodes asmbl.710...    32   0.44 
gi|338241177|gb|AFNH01002578.1| Gregarina niphandrodes asmbl.330...    32   0.44 
gi|338241486|gb|AFNH01002422.1| Gregarina niphandrodes asmbl.316...    31   0.99 
gi|338243502|gb|AFNH01001414.1| Gregarina niphandrodes asmbl.223...    30   1.3  
gi|338242329|gb|AFNH01002000.1| Gregarina niphandrodes asmbl.277...    30   1.7  
gi|338240893|gb|AFNH01002720.1| Gregarina niphandrodes asmbl.344...    30   2.2  
gi|338241574|gb|AFNH01002378.1| Gregarina niphandrodes asmbl.312...    29   2.9  
gi|338242301|gb|AFNH01002014.1| Gregarina niphandrodes asmbl.278...    29   2.9  
gi|338241772|gb|AFNH01002279.1| Gregarina niphandrodes asmbl.302...    29   3.8  
gi|338240452|gb|AFNH01002940.1| Gregarina niphandrodes asmbl.364...    28   4.9  
gi|338240557|gb|AFNH01002887.1| Gregarina niphandrodes asmbl.359...    28   4.9  
gi|338241151|gb|AFNH01002591.1| Gregarina niphandrodes asmbl.331...    28   4.9  
gi|338241955|gb|AFNH01002187.1| Gregarina niphandrodes asmbl.294...    28   6.4  
gi|338243308|gb|AFNH01001511.1| Gregarina niphandrodes asmbl.232...    28   6.4  
gi|338243582|gb|AFNH01001374.1| Gregarina niphandrodes asmbl.220...    28   6.4  
gi|338240313|gb|AFNH01003010.1| Gregarina niphandrodes asmbl.393...    28   8.4  
gi|338242467|gb|AFNH01001931.1| Gregarina niphandrodes asmbl.271...    28   8.4  

>gi|338242902|gb|AFNH01001714.1| Gregarina niphandrodes asmbl.2512,
             whole genome shotgun sequence
          Length = 28202

 Score = 36.2 bits (82), Expect = 0.024
 Identities = 66/267 (24%), Positives = 97/267 (36%), Gaps = 21/267 (7%)
 Frame = -3

Query: 11    GEAMAAAEGSSGPAGLTLGRSFSNYRPFEPQALGLSPSWRLTGFSGMKGXGCKVPQEALL 70
             GE +   E  SG +   LG S     P     LG SP   L GF  ++G   K   E L 
Sbjct: 21420 GETVPLGESPSGES--PLGES-----PLGESPLGESPLGSL-GF--IRGVPTKAAGETLR 21271

Query: 71    KLLAGLTRPDVRPPLGRGLVGGQEEASQEAGLPAGADPSPTFPALGIGMDSCVIPLRHGG 130
              L        + PP+G     G E AS+ + +P    P   +     G     I      
Sbjct: 21270 LLGEASALRGLVPPMGLVPAMGLEPASKISNMPTSGQPEVGYVGWAGGTILASIWFSVPR 21091

Query: 131   LSLVQTTDFFYPLVEDPYMMGRIACANVLSDLYAMGITECDNMLML-------LSVSQSM 183
             ++L +T      +  D +MM R+ C   +S   A  +   D +  L       L  + S 
Sbjct: 21090 ITLSET------VASDLFMM-RM*CLTTVSQSPAGSVPRKDFVFCLRKEVRHWLERAISR 20932

Query: 184   SEEEREKVTPLMVKGFRDAAEEGGTAVTGGQTVVNPWII------IGG--------VATV 229
             S   REK +   ++G R A+  G   +  G     PW +      IG          A V
Sbjct: 20931 SWSSREKTSCCSLRGSRMASTTGLRGLR*GVVKWRPWSVRMSPSQIGWASDGMTS*TALV 20752

Query: 230   VCQPNEFIMPDSAVVGDVLVLTKPLGT 256
             +C     +    + V    V ++PL T
Sbjct: 20751 MCASTFMLECGKSPVAQAAVYSRPLTT 20671


>gi|338239606|gb|AFNH01003363.1| Gregarina niphandrodes asmbl.710,
           whole genome shotgun sequence
          Length = 1200

 Score = 32.0 bits (71), Expect = 0.44
 Identities = 18/45 (40%), Positives = 25/45 (55%)
 Frame = +3

Query: 56  GMKGXGCKVPQEALLKLLAGLTRPDVRPPLGRGLVGGQEEASQEA 100
           G +G  C  PQ+ALLK++  L R      +GR L+  Q   SQE+
Sbjct: 288 GKRGLLCYQPQDALLKIVNALARVSTTNHVGRRLI-SQSTGSQES 419


>gi|338241177|gb|AFNH01002578.1| Gregarina niphandrodes asmbl.3306,
            whole genome shotgun sequence
          Length = 11881

 Score = 32.0 bits (71), Expect = 0.44
 Identities = 18/45 (40%), Positives = 25/45 (55%)
 Frame = -2

Query: 56   GMKGXGCKVPQEALLKLLAGLTRPDVRPPLGRGLVGGQEEASQEA 100
            G +G  C  PQ+ALLK++  L R      +GR L+  Q   SQE+
Sbjct: 8331 GKRGLLCYQPQDALLKIVNALARVSTANHVGRRLI-SQSTGSQES 8200


>gi|338241486|gb|AFNH01002422.1| Gregarina niphandrodes asmbl.3164,
             whole genome shotgun sequence
          Length = 28666

 Score = 30.8 bits (68), Expect = 0.99
 Identities = 29/92 (31%), Positives = 36/92 (39%), Gaps = 3/92 (3%)
 Frame = -1

Query: 29    GRSFSNYRPFEPQALG--LSPSWRLTGFSGMKGXGCKVPQ-EALLKLLAGLTRPDVRPPL 85
             G  FS   P  P A    L+P+  L     +   G  V   +AL      L  P   PPL
Sbjct: 21904 GSRFSPLAPTRPLAPTGPLAPTGPLAPTGPLAPTGPTVAAGDALTGGFETLLAPAAGPPL 21725

Query: 86    GRGLVGGQEEASQEAGLPAGADPSPTFPALGI 117
               GL  G   A   A    GA  +P  PA+G+
Sbjct: 21724 AGGLTAGGFAALDSAAGAGGAFLAPALPAIGL 21629


>gi|338243502|gb|AFNH01001414.1| Gregarina niphandrodes asmbl.2238,
           whole genome shotgun sequence
          Length = 2981

 Score = 30.4 bits (67), Expect = 1.3
 Identities = 32/128 (25%), Positives = 52/128 (40%), Gaps = 18/128 (14%)
 Frame = -1

Query: 176 LLSVSQSMSEEEREKVTPLMVKGFRDAAEEGGTAVTGGQTVVNPWIII------------ 223
           LL + +S  E +R  ++    +G  + +EEG  A  GG+   +P I+             
Sbjct: 815 LLGLPESYREPDRASLSTASEEGTHEISEEGSPAKVGGRAAPHPLILFWLDRDRVTVYEA 636

Query: 224 ----GGVATVVCQPNEFIMPDSAVVGDVLVLTKPLGTQVAVNAHQWLDNPE--RWNKVKM 277
                 + T+V + + F++   A   D L L K L     +    + DN E  R  +V  
Sbjct: 635 ALNTSSLQTIVAEISSFVLIREA---DCLNLMKLL-----LALQDYFDNIEISRHTRVHK 480

Query: 278 VVSREEVE 285
           V SR   E
Sbjct: 479 VSSRRRRE 456


>gi|338242329|gb|AFNH01002000.1| Gregarina niphandrodes asmbl.2775,
             whole genome shotgun sequence
          Length = 25198

 Score = 30.0 bits (66), Expect = 1.7
 Identities = 17/54 (31%), Positives = 23/54 (42%)
 Frame = +1

Query: 88    GLVGGQEEASQEAGLPAGADPSPTFPALGIGMDSCVIPLRHGGLSLVQTTDFFY 141
             G  GG+ +A +EA LP G DP P     G   +  V+      L  +  T   Y
Sbjct: 14614 GQAGGKRDACEEAVLPTG*DPDP*VRVFGATDEGKVVGAEAMCLETLDITQLMY 14775


>gi|338240893|gb|AFNH01002720.1| Gregarina niphandrodes asmbl.3440,
            whole genome shotgun sequence
          Length = 10094

 Score = 29.6 bits (65), Expect = 2.2
 Identities = 19/52 (36%), Positives = 27/52 (51%)
 Frame = -2

Query: 43   LGLSPSWRLTGFSGMKGXGCKVPQEALLKLLAGLTRPDVRPPLGRGLVGGQE 94
            +G  P+WR T +SG +   C  P        +G+  PD+R   G+GLV G E
Sbjct: 4549 IGRRPTWRQTHYSGWE---CNSPG*G-----SGIHHPDIR--CGKGLVQGPE 4424


>gi|338241574|gb|AFNH01002378.1| Gregarina niphandrodes asmbl.3121,
            whole genome shotgun sequence
          Length = 10671

 Score = 29.3 bits (64), Expect = 2.9
 Identities = 14/26 (53%), Positives = 16/26 (61%), Gaps = 1/26 (3%)
 Frame = -2

Query: 104  AGADPSPTFPALGI-GMDSCVIPLRH 128
            AG  P PT P  G  G  +CV+PLRH
Sbjct: 5123 AGLSP*PTAPISGTRGSHTCVVPLRH 5046


>gi|338242301|gb|AFNH01002014.1| Gregarina niphandrodes asmbl.2788,
            whole genome shotgun sequence
          Length = 10447

 Score = 29.3 bits (64), Expect = 2.9
 Identities = 34/116 (29%), Positives = 46/116 (39%), Gaps = 6/116 (5%)
 Frame = -1

Query: 36   RPFEPQALGLSPSWRLT-GFSGMKGXGCKVPQEALLKLLAGLTRPDVRPPLGRGLVGGQE 94
            RP +   LG  PS RLT G S  +G                     VR   GR +V  +E
Sbjct: 7864 RPSKQLVLGRRPSTRLTHGISPRRGIS------------------PVRISRGREVVPDRE 7739

Query: 95   -----EASQEAGLPAGADPSPTFPALGIGMDSCVIPLRHGGLSLVQTTDFFYPLVE 145
                 E S    +P G +PS   P+  I + S  I L H G+ L  ++    P +E
Sbjct: 7738 VASGREISSAREVPTGVEPSGIVPSDTICLFSGSICLPHDGICLPPSSFSPTPFLE 7571


>gi|338241772|gb|AFNH01002279.1| Gregarina niphandrodes asmbl.3028,
            whole genome shotgun sequence
          Length = 14770

 Score = 28.9 bits (63), Expect = 3.8
 Identities = 29/98 (29%), Positives = 39/98 (39%), Gaps = 4/98 (4%)
 Frame = -1

Query: 24   AGLTLGRSFSNYRPFEPQALGLSPSWRLTGFSGMKGXGCKVPQEALLKLLAGLTRPDVRP 83
            A L LG  F   R +  + +G +  W LTG S      C      L KLL+   R  VRP
Sbjct: 3412 AVLQLGVEFQ-MREYSWRGMGFATIW-LTGLS--TSA*CMPMLSLLTKLLSWAVRATVRP 3245

Query: 84   PL----GRGLVGGQEEASQEAGLPAGADPSPTFPALGI 117
            P+     R   G    +  +  LP    P    P +G+
Sbjct: 3244 PVA*ERNRVATGRMGRSFSQIALPLMGLPLMGLPLMGL 3131


>gi|338240452|gb|AFNH01002940.1| Gregarina niphandrodes asmbl.3644,
             whole genome shotgun sequence
          Length = 23181

 Score = 28.5 bits (62), Expect = 4.9
 Identities = 18/66 (27%), Positives = 30/66 (45%), Gaps = 4/66 (6%)
 Frame = +1

Query: 49    WRLTGFSGMKGXGCKVPQEALL---KLLAGLTRPDVR-PPLGRGLVGGQEEASQEAGLPA 104
             W L G  G++  GCK+  ++++    LL GL +  +    LG    G  ++ +    L A
Sbjct: 21382 WGLVGLGGVQSRGCKIRVQSMIMRRALLLGLAQAQLHFASLGNWGAGNAQQHAVARSLKA 21561

Query: 105   GADPSP 110
              A   P
Sbjct: 21562 AAANPP 21579


>gi|338240557|gb|AFNH01002887.1| Gregarina niphandrodes asmbl.3596,
             whole genome shotgun sequence
          Length = 24137

 Score = 28.5 bits (62), Expect = 4.9
 Identities = 18/66 (27%), Positives = 25/66 (37%), Gaps = 11/66 (16%)
 Frame = -2

Query: 7     TGACGEAMAAAEGSSGPAGLTLGRS-----------FSNYRPFEPQALGLSPSWRLTGFS 55
             TG+C E+     G  G   L LGR            FS +  F+ +    S S  +    
Sbjct: 23107 TGSCSESSVVTHGPKGRRRLALGRRYPSSSPLPTCFFSGHSLFQQRLRSSSSSLAIASLH 22928

Query: 56    GMKGXG 61
             G +G G
Sbjct: 22927 GKRGIG 22910


>gi|338241151|gb|AFNH01002591.1| Gregarina niphandrodes asmbl.3318,
             whole genome shotgun sequence
          Length = 27172

 Score = 28.5 bits (62), Expect = 4.9
 Identities = 12/30 (40%), Positives = 19/30 (63%)
 Frame = +1

Query: 76    LTRPDVRPPLGRGLVGGQEEASQEAGLPAG 105
             L++ + RPP GRG  G ++  S++AG   G
Sbjct: 26263 LSKKEERPPTGRGGFGSRDTYSRDAGTGGG 26352


>gi|338241955|gb|AFNH01002187.1| Gregarina niphandrodes asmbl.2946,
            whole genome shotgun sequence
          Length = 8311

 Score = 28.1 bits (61), Expect = 6.4
 Identities = 15/33 (45%), Positives = 20/33 (60%)
 Frame = +3

Query: 347  IAKMAAVSKASGRFGLLQGTSAETSGGLLICLP 379
            I + ++V   S  F LL G+   TSGG L+CLP
Sbjct: 3645 ITRTSSVRLGSSLFPLLTGSDL-TSGGSLVCLP 3740


>gi|338243308|gb|AFNH01001511.1| Gregarina niphandrodes asmbl.2326,
            whole genome shotgun sequence
          Length = 6337

 Score = 28.1 bits (61), Expect = 6.4
 Identities = 14/31 (45%), Positives = 18/31 (58%)
 Frame = -3

Query: 77   TRPDVRPPLGRGLVGGQEEASQEAGLPAGAD 107
            T PD+ PP G+  +GG  EA  EAG   G +
Sbjct: 5045 TPPDLDPPRGKADIGG--EAGGEAGCETGGE 4959


>gi|338243582|gb|AFNH01001374.1| Gregarina niphandrodes asmbl.2201,
            whole genome shotgun sequence
          Length = 3154

 Score = 28.1 bits (61), Expect = 6.4
 Identities = 15/50 (30%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
 Frame = -2

Query: 77   TRPDVRPPLGRGLVGGQEEASQEAGL-PAGADPSPTFPALGIGMDSCVIP 125
            T P + PP G    G +   ++ +G  P+GA+PS   P+  +G  +  +P
Sbjct: 2634 TAPVLDPPSGAEPSGAEPAGAEPSGAEPSGAEPSGAEPSGAVGSVAGTLP 2485


>gi|338240313|gb|AFNH01003010.1| Gregarina niphandrodes asmbl.393,
            whole genome shotgun sequence
          Length = 1551

 Score = 27.7 bits (60), Expect = 8.4
 Identities = 15/40 (37%), Positives = 23/40 (57%)
 Frame = -1

Query: 194  LMVKGFRDAAEEGGTAVTGGQTVVNPWIIIGGVATVVCQP 233
            + V GFR    +  TA++G  ++V    ++GGVA VV  P
Sbjct: 1050 ICVLGFRTD*AKTATALSGMSSLVKGTELVGGVADVVMLP 931


>gi|338242467|gb|AFNH01001931.1| Gregarina niphandrodes asmbl.2711,
            whole genome shotgun sequence
          Length = 34847

 Score = 27.7 bits (60), Expect = 8.4
 Identities = 20/55 (36%), Positives = 25/55 (45%)
 Frame = +2

Query: 5    SATGACGEAMAAAEGSSGPAGLTLGRSFSNYRPFEPQALGLSPSWRLTGFSGMKG 59
            SA G CG      EG  GP GL   RS+    P   ++ GL P     G S ++G
Sbjct: 9353 SAMGVCGLRSLRPEGVWGPGGL---RSWGVCGPRGLRSGGLRPGGLRPGGSAVRG 9508


  Database: G.niphandrodes/genome.fa
    Posted date:  Nov 21, 2011  7:46 PM
  Number of letters in database: 15,362,869
  Number of sequences in database:  3680
  
Lambda     K      H
   0.317    0.133    0.391 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,868,159
Number of Sequences: 3680
Number of extensions: 152418
Number of successful extensions: 986
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 535
Number of HSP's successfully gapped in prelim test: 63
Number of HSP's that attempted gapping in prelim test: 372
Number of HSP's gapped (non-prelim): 731
length of query: 448
length of database: 5,120,956
effective HSP length: 98
effective length of query: 350
effective length of database: 4,760,316
effective search space: 1666110600
effective search space used: 1666110600
frameshift window, decay const: 40,  0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 59 (27.3 bits)
