genewise output
Score 16.68 bits over entire alignment
Scores as bits over a synchronous coding model

Warning: The bits scores is not probablistically correct for single seqs
See WWW help for more info

SPP00000012_1.0    2 LSATRRACQLLLL                                     
                     L  + R+CQLLL+                                     
                     LHTSYRSCQLLLI                                     
T.congo.pschr.820807 ccattcatcccca                                     
                     taccagggatttt                                     
                     ttgaccctattta                                     


//
>T.congo.pschr.8:subseq(0,30000).[20807:20845].sp
CTTCATACGTCATACCGCAGCTGTCAACTTCTTCTTATA
//
T.congo.pschr.8:subseq(0,30000)	GeneWise	match	20807	20845	16.68	+	.	T.congo.pschr.8:subseq(0,30000)-genewise-prediction-1
T.congo.pschr.8:subseq(0,30000)	GeneWise	cds	20807	20845	0.00	+	0	T.congo.pschr.8:subseq(0,30000)-genewise-prediction-1
//

genewise output
Score 106.66 bits over entire alignment
Scores as bits over a synchronous coding model

Warning: The bits scores is not probablistically correct for single seqs
See WWW help for more info

SPP00000012_1.0   68 AVFGMGXFWGAERKF--WVLKGVYSTQVGFAGGYTSNP--TYKEVCSEK 
                     A F  G FWG E  F      G+ S +VGF GG T  P   Y+ V   + 
                     ATFAAGCFWGTEHYFKKFFGAGLLSHRVGFMGG-TELPEVSYELVKGGQ 
T.congo.pschr.8-6496 gatgggtttgagcttaattgggcctccggtagg agccggatgtgaggc 
                     cctccggtggcaaataattgcgttcagtgttgg catcatgaattagga 
                     gatggatcggggcccgaccacaccccccttgac tgggggtcggtaccg 


SPP00000012_1.0  113 TGHAEVVRVVYQPEHMSFEELLKVFWENHDPTQGMRQGNDHGTQYRSAI 
                     +GHAEV+ + Y P+ +++ +LL+ F+  H+ T   RQGND G+QYRSAI 
                     SGHAEVLHLTYSPDKVAYRDLLEYFFRIHNSTTLNRQGNDVGSQYRSAI 
T.congo.pschr.8-6352 agcgggcctatacgaggtcgtcgtttcacataacaccgagggactcaga 
                     ggacattatcagcaatcagattaattgtaaccctagagaatggaaggct 
                     ccccgggcggccccgggcgcgcgctccacccagctcgaccttcaccctt 


SPP00000012_1.0  162 YPTSAKQMEAA------LSSKENYQKVLSEHGFGP---ITTDIREGQTF 
                     +  + +Q   A      L+  +     L  + FGP   + T +     F 
                     FYHNDEQKREAEHYIEGLNGADGELHKLIVNAFGPEAKVVTTVESASRF 
T.congo.pschr.8-6205 ttcaggcacgggctaggcagggggccatagagtgcggaggaaggagtct 
                     taaaaaaagacaaatagtagcagataatttactgcacattcctagccgt 
                     tccttaggggggcctgtcctctcggcaatccctccaggggatggccccc 


SPP00000012_1.0  202 YYAEDYHQQYLSKNPNGYC                               
                     Y AE+YHQ YL  NP GYC                               
                     YPAEEYHQNYLELNPAGYC                               
T.congo.pschr.8-6058 tcgggtccattgcacggtt                               
                     accaaaaaaatataccgag                               
                     ctgggctgccgaactcatt                               


//
>T.congo.pschr.8:subseq(0,30000).[6496:6000].sp
GCGACATTTGCGGCGGGATGTTTCTGGGGGACGGAGCACTACTTCAAGAAATTCTTCGGA
GCCGGACTCCTCTCCCACCGCGTCGGTTTTATGGGAGGCACTGAGCTGCCGGAGGTGAGT
TACGAGTTGGTTAAAGGCGGCCAGAGCGGCCACGCCGAGGTGCTGCACTTGACGTACAGC
CCCGACAAGGTGGCGTACCGGGACTTGCTCGAGTACTTTTTCCGCATACACAACTCCACA
ACGCTCAATCGCCAGGGAAACGACGTTGGTAGCCAATACCGCAGCGCTATTTTTTACCAC
AATGATGAACAGAAGCGGGAGGCGGAGCACTACATTGAGGGTCTCAACGGTGCCGATGGC
GAGCTGCACAAATTAATTGTCAACGCCTTTGGCCCCGAAGCGAAGGTGGTGACAACTGTG
GAGAGCGCCTCCCGCTTCTACCCTGCGGAGGAGTACCATCAGAACTACTTGGAACTAAAC
CCTGCCGGATATTGT
//
T.congo.pschr.8:subseq(0,30000)	GeneWise	match	6496	6002	115.64	-	.	T.congo.pschr.8:subseq(0,30000)-genewise-prediction-1
T.congo.pschr.8:subseq(0,30000)	GeneWise	cds	6496	6002	0.00	-	0	T.congo.pschr.8:subseq(0,30000)-genewise-prediction-1
//