genewise output
Score 17.56 bits over entire alignment
Scores as bits over a synchronous coding model

Warning: The bits scores is not probablistically correct for single seqs
See WWW help for more info

SPP00000012_1.0    9 CQLLLLHSLFPVPRM                                   
                     C ++L H  F VPR+                                   
                     CIIVLYHKHFRVPRI                                   
Contig4808:subs10021 taagctcactcgcca                                   
                     gttttaaaatgtcgt                                   
                     tccacccgcccgctt                                   


//
>Contig4808:subseq(3547,20928).[10021:10065].sp
TGTATCATCGTACTCTACCACAAGCACTTCCGCGTGCCCCGTATT
//
Contig4808:subseq(3547,20928)	GeneWise	match	10021	10065	17.56	+	.	Contig4808:subseq(3547,20928)-genewise-prediction-1
Contig4808:subseq(3547,20928)	GeneWise	cds	10021	10065	0.00	+	0	Contig4808:subseq(3547,20928)-genewise-prediction-1
//

genewise output
Score 54.10 bits over entire alignment
Scores as bits over a synchronous coding model

Warning: The bits scores is not probablistically correct for single seqs
See WWW help for more info

SPP00000012_1.0   57 TVEPFPEGTQMAVFGMGXFWGAERKFWVLKGVYST               
                     + +P+  G Q A FG G FWG E+ F     +                  
                     SAKPLAMGVQKASFGAGCFWGTEKFFRKEFNLIDA               
Contig4808:sub-10529 tgactgaggcagttgggtttgagattcagtatagg               
                     ccactctgtaacctgcggtggcaattgaatattac               
                     tcatacgatgaaatatgtcgctggctgagccgttc               


SPP00000012_1.0   92                           VGFAGGYTSNPTYKEVCSEKTGH 
                                               VG+ GG   NPTYK+VC+  TGH 
                                Q:K[aag]       VGYQGGDAKNPTYKQVCTGNTGH 
Contig4808:sub-10424 AAGTATGTA  Intron 1   TAGGggtcggggaacatacgtagaagc 
                       <2-----[10422:10124]-2> tgaaggacaaccaaatgcgacga 
                                               tacaattcataacaaacagtggc 


SPP00000012_1.0  116 AEVVRVVYQPEHMSFEEL                                
                     AEV+ V Y    +++ +L                                
                     AEVLVVEYDDTKVNYADL                                
Contig4808:sub-10053 gggcgggtggaagatggt                                
                     cattttaaaacataacat                                
                     gagtgagcttaatttttg                                


//
>Contig4808:subseq(3547,20928).[10529:9998].sp
TCTGCCAAACCTTTAGCCATGGGAGTTCAGAAAGCATCATTTGGAGCTGGGTGTTTCTGG
GGCACTGAGAAGTTCTTTCGGAAAGAGTTCAACTTGATTGATGCCAAGGTTGGATACCAA
GGAGGTGATGCCAAAAATCCAACATACAAACAAGTATGCACAGGGAATACGGGGCACGCG
GAAGTGCTTGTGGTAGAGTACGATGATACAAAAGTTAATTATGCTGATTTG
//
Contig4808:subseq(3547,20928)	GeneWise	match	10529	10000	54.10	-	.	Contig4808:subseq(3547,20928)-genewise-prediction-1
Contig4808:subseq(3547,20928)	GeneWise	cds	10529	10423	0.00	-	0	Contig4808:subseq(3547,20928)-genewise-prediction-1
Contig4808:subseq(3547,20928)	GeneWise	intron	10422	10124	0.00	-	.	Contig4808:subseq(3547,20928)-genewise-prediction-1
Contig4808:subseq(3547,20928)	GeneWise	cds	10123	10000	0.00	-	1	Contig4808:subseq(3547,20928)-genewise-prediction-1
//