genewise output
Score 108.38 bits over entire alignment
Scores as bits over a synchronous coding model

Warning: The bits scores is not probablistically correct for single seqs
See WWW help for more info

SPP00000012_1.0   68 AVFGMGXFWGAERKFWVLK---GVYSTQVGFAGGYTSNP-TYKEVCSEK 
                     A F  G +WG E  F++ K   G+ S QVGF GG      TY EV +   
                     ATFAAGCYWGTEH-FFLRKFKDGIVSHQVGFMGGAEERTITYAEVKNGN 
Lt_contig429     332 gatgggtttgagc ttccataggagtccggtagggggaaaatgggaaga 
                     cctccggaggcaa tttgataagttcaatgttggcaagctcacataaga 
                     tcctcaccgcggc ctggacgtctggcgcttgcctgggaatctatgccc 


SPP00000012_1.0  113 TGHAEVVRVVYQPEHMSFEELLKVFWENHDPTQGMRQGNDHGTQYRSAI 
                     +GHAEV+ ++Y P+ +++++LL  F+  H+ T   RQ  D GT YRSAI 
                     SGHAEVLDLMYDPDKVTYKDLLSFFFRMHNSTTLNRQEGDVGTNYRSAI 
Lt_contig429     476 tgcgggtgtatgcgagatagtcttttcacataacaccgggggaatcaga 
                     cgacattattaacaatcaaattctttgtaaccctagaagatgcaaggct 
                     accggcgcggtcccgcacgcgctcctcgcccgcgcgggccttcccctcc 


SPP00000012_1.0  162 YPTSAKQMEAA-------LSSKENYQKVLSE-HGFGPITTDIREGQTFY 
                     +  S +Q + A         + E      S+  G  P  T + +G  FY 
                     FYYSDEQKKEADDYIAKLNGADEKLHSAFSKAFGGNPCITSVEKGSQFY 
Lt_contig429     623 tttaggcaaggggtagacaggggacctgtaagtggactaaaggagactt 
                     taagaaaaaacaaatcatagcaaatacctgactggacgtcgtaaggata 
                     cccccgaggggccctcggctttgattctccactcacgccccgggctacc 


SPP00000012_1.0  203 YAEDYHQQYLSKNPNGYC                                
                      A + HQ YL KNPNGYC                                
                     PAHEEHQNYLDKNPNGYC                                
Lt_contig429     770 cgcggccatcgaacagtt                                
                     ccaaaaaaataaacagag                                
                     cgtgacgctccgcgtcct                                


//
>Lt_contig429.[332:823].sp
GCTACCTTCGCTGCCGGATGCTACTGGGGCACGGAGCACTTCTTTCTGCGGAAATTCAAG
GATGGCATTGTGTCGCACCAGGTCGGTTTTATGGGCGGCGCTGAGGAGAGGACAATAACT
TACGCTGAAGTTAAGAACGGCAACTCAGGCCACGCGGAGGTCTTGGACTTGATGTATGAC
CCCGACAAGGTCACATACAAGGACTTGCTCTCTTTCTTCTTTCGCATGCACAACTCCACG
ACCCTGAACCGGCAGGAGGGCGACGTTGGTACCAACTACCGCAGTGCCATCTTCTACTAC
AGCGACGAGCAAAAGAAGGAGGCGGACGACTACATTGCCAAGCTGAACGGTGCTGATGAG
AAACTTCATTCCGCTTTCAGCAAAGCCTTTGGCGGAAACCCGTGCATCACCAGCGTGGAG
AAGGGCAGTCAATTCTACCCCGCGCATGAGGAACACCAGAACTATCTCGACAAGAACCCG
AATGGCTACTGT
//
Lt_contig429	GeneWise	match	332	823	116.37	+	.	Lt_contig429-genewise-prediction-1
Lt_contig429	GeneWise	cds	332	823	0.00	+	0	Lt_contig429-genewise-prediction-1
//

genewise output
Score 15.58 bits over entire alignment
Scores as bits over a synchronous coding model

Warning: The bits scores is not probablistically correct for single seqs
See WWW help for more info

SPP00000012_1.0  135 KVFWENH                                           
                     KV W NH                                           
                     KVHWRNH                                           
Lt_contig429  -14634 agctaac                                           
                     ataggaa                                           
                     gatgatt                                           


//
>Lt_contig429.[14634:14612].sp
AAGGTACATTGGAGAAATCAT
//
Lt_contig429	GeneWise	match	14634	14614	15.58	-	.	Lt_contig429-genewise-prediction-1
Lt_contig429	GeneWise	cds	14634	14614	0.00	-	0	Lt_contig429-genewise-prediction-1
//