genewise output
Score 104.19 bits over entire alignment
Scores as bits over a synchronous coding model

Warning: The bits scores is not probablistically correct for single seqs
See WWW help for more info

SPP00000078_1.0   68 FGMGXFWGAERKFWVLKGVYSTQVGFAGGHTRNPTYKEVCSEKTGHAEV 
                     FG G FW     F  +KGV + + G++ G  +NPTYKE+C+  TGHAEV 
                     FGGGCFWCLHAIFKRVKGVINVKSGYSSGQVKNPTYKEICTGTTGHAEV 
gi|340506345|gb    4 tgggtttttcgatacgaggaagatgtttgcgaacatagatagaagcggg 
                     tggggtggtacttagtagttatacgaccgataaccaaatgcgccgacat 
                     tattccgtactatataactacaaattgtaaaataataaataatattcat 


SPP00000078_1.0  117 VRVVYRPEHISFEELLKVFW--------------ENHDPTQGMRQGNDF 
                     V++ +  + I +E +L +F+                HDPTQ  RQGND+ 
                     VQIEFDIQKILYENILDIFFHVIKININQYLYNIQ!HDPTQSNRQGNDI 
gi|340506345|gb  151 gcagtgacaattgaatgattcgaaaaaactttaac5cgcactaacgaga 
                     tatatataattaaattatttattatataaataata aaccacagagaat 
                     taaactaaatatataatttctataatttatattta ttaaaataaattc 


SPP00000078_1.0  152 GTQYRSAVYPTSAVQMEAALRSKEEYQKVLSKH-NFGPITTDIREGQVF 
                     GTQYRS +   +  Q       KE  +K+L++  N    TT+I++ + F 
                     GTQYRSTILYRNQQQ-------KEISEKILNQQPNKDKTTTEIKQFEEF 
gi|340506345|gb  300 gactctaattaaccc       agaagaacacccaagaaaagaactggt 
                     gcaagccttagaaaa       aatgaattaaacaaaacccataataat 
                     taatcaaaatacaaa       aattaaattaaatataaaaataacaat 


SPP00000078_1.0  200 YYAEDYHQQYLSKNPD-GYC                              
                     Y AE+YHQ Y  +N + GYC                              
                     YEAEEYHQDYYDQNTEQGYC                              
gi|340506345|gb  426 tggggtccgttgcaagcgtt                              
                     aacaaaaaaaaaaacaagag                              
                     tacaattatttcacaaaatt                              


//
gi|340506345|gb|GL983651.1|:subseq(2861,17852)	GeneWise	match	4	255	49.56	+	.	gi|340506345|gb|GL983651.1|:subseq(2861,17852)-genewise-prediction-1
gi|340506345|gb|GL983651.1|:subseq(2861,17852)	GeneWise	cds	4	255	0.00	+	0	gi|340506345|gb|GL983651.1|:subseq(2861,17852)-genewise-prediction-1
gi|340506345|gb|GL983651.1|:subseq(2861,17852)	GeneWise	match	261	485	73.61	+	.	gi|340506345|gb|GL983651.1|:subseq(2861,17852)-genewise-prediction-2
gi|340506345|gb|GL983651.1|:subseq(2861,17852)	GeneWise	cds	261	485	0.00	+	0	gi|340506345|gb|GL983651.1|:subseq(2861,17852)-genewise-prediction-2
//

genewise output
Score 10.99 bits over entire alignment
Scores as bits over a synchronous coding model

Warning: The bits scores is not probablistically correct for single seqs
See WWW help for more info

SPP00000078_1.0  149 NDFGTQYRSAVY                                      
                     N+FG    S  Y                                      
                     NNFGMTCSSCTY                                      
gi|340506345|gb -153 aatgaatattat                                      
                     aatgtcggcgca                                      
                     ccccgcttctat                                      


//
gi|340506345|gb|GL983651.1|:subseq(2861,17852)	GeneWise	match	153	118	10.99	-	.	gi|340506345|gb|GL983651.1|:subseq(2861,17852)-genewise-prediction-1
gi|340506345|gb|GL983651.1|:subseq(2861,17852)	GeneWise	cds	153	118	0.00	-	0	gi|340506345|gb|GL983651.1|:subseq(2861,17852)-genewise-prediction-1
//