TBLASTN 2.2.13 [Nov-27-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= SPP00000075_1.0
         (184 letters)

Database: D.fasciculatum/genome.fa 
           25 sequences; 31,019,208 total letters

Searching.........................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gi|328872098|gb|GL883010.1| Dictyostelium fasciculatum unplaced ...   114   4e-26
gi|328864870|gb|GL883029.1| Dictyostelium fasciculatum unplaced ...    27   8.0  
gi|328866594|gb|GL883026.1| Dictyostelium fasciculatum unplaced ...    27   8.0  

>gi|328872098|gb|GL883010.1| Dictyostelium fasciculatum unplaced genomic
              scaffold Scf_Dfasci-F-a-25c12.r2-5, whole genome shotgun
              sequence
          Length = 4166812

 Score =  114 bits (285), Expect = 4e-26
 Identities = 63/153 (41%), Positives = 87/153 (56%)
 Frame = +1

Query: 20     TLACGXFWGTEHMYRKYLNDRIVDCKVGYANGEESKKDSPSSVSYKRVCGGDTDFAEVLQ 79
              TLA G FW  E ++++ +   +V  KVGY  G    K +P+   YK VC G T   E ++
Sbjct: 176710 TLAGGCFWSVELVFQRVMG--VVSTKVGYTQGH---KVNPT---YKEVCTGTTGHTEAVE 176865

Query: 80     VSYNPKVITLRELTDFFFRIHDPTTSNSQGPDKGTQYRSGLFAHSDADLKELAKIKEEWQ 139
              + Y+  V++   L D F++  DPTT N QG D GTQYRSG++ H+D    E  K ++E Q
Sbjct: 176866 LEYDDTVVSYPALLDVFWKKIDPTTLNRQGGDSGTQYRSGIYYHNDQQRVEAEKSRDEEQ 177045

Query: 140    PKWGNKIATVIEPIKNFYDAEEYHQLYLDKNPQ 172
               K   KI   + P  +FY AE+YHQ YL K  Q
Sbjct: 177046 KKHREKIVVEVLPSSHFYFAEDYHQQYLAKGGQ 177144


>gi|328864870|gb|GL883029.1| Dictyostelium fasciculatum unplaced genomic
              scaffold Scf_EUAJFUG02HR96I-5, whole genome shotgun
              sequence
          Length = 3408800

 Score = 26.9 bits (58), Expect = 8.0
 Identities = 12/39 (30%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
 Frame = -3

Query: 26     FWGTEHMYRKYLNDRIVD-CKVGYANGEESKKDSPSSVS 63
              FW   HM ++YL   ++D C + Y     ++  +P  VS
Sbjct: 690723 FWFESHMKQRYLKMMLLDTCTIIYQTNYSTRYSNPHKVS 690607


>gi|328866594|gb|GL883026.1| Dictyostelium fasciculatum unplaced genomic
              scaffold Scf_EU5ZYIE02H8LDV-5, whole genome shotgun
              sequence
          Length = 1919465

 Score = 26.9 bits (58), Expect = 8.0
 Identities = 11/47 (23%), Positives = 25/47 (53%)
 Frame = -2

Query: 134    IKEEWQPKWGNKIATVIEPIKNFYDAEEYHQLYLDKNPQGYACPTHY 180
              ++ E  P+W + ++ ++  +KN    +E  ++   KN + Y C  +Y
Sbjct: 449890 LQSEQPPQWADALSKILSDLKN---KKEEDRIRGAKNLKNYVCKLYY 449759


  Database: D.fasciculatum/genome.fa
    Posted date:  Nov 21, 2011  7:46 PM
  Number of letters in database: 31,019,208
  Number of sequences in database:  25
  
Lambda     K      H
   0.316    0.134    0.413 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,445,146
Number of Sequences: 25
Number of extensions: 86200
Number of successful extensions: 340
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 327
Number of HSP's gapped (non-prelim): 69
length of query: 184
length of database: 10,339,736
effective HSP length: 94
effective length of query: 90
effective length of database: 10,337,386
effective search space: 930364740
effective search space used: 930364740
frameshift window, decay const: 40,  0.1
T: 13
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 57 (26.6 bits)