genewise output
Score 19.96 bits over entire alignment
Scores as bits over a synchronous coding model

Warning: The bits scores is not probablistically correct for single seqs
See WWW help for more info

SPP00000075_1.0   52 EESKKDSPSSVSYKRVCGG                               
                     EE KK S  S    RVCGG                               
                     EEEKKRSGLSADDMRVCGG                               
Cf_Contig616:su22103 gggaaaagctgggacgtgg                               
                     aaaaagggtccaatgtggg                               
                     aaaaaatgcaaccgtgtgg                               


//
>Cf_Contig616:subseq(0,30000).[22103:22159].sp
GAAGAAGAAAAAAAAAGAAGTGGGCTCTCAGCAGACGACATGCGTGTGTGTGGGGGG
//
Cf_Contig616:subseq(0,30000)	GeneWise	match	22103	22159	19.96	+	.	Cf_Contig616:subseq(0,30000)-genewise-prediction-1
Cf_Contig616:subseq(0,30000)	GeneWise	cds	22103	22159	0.00	+	0	Cf_Contig616:subseq(0,30000)-genewise-prediction-1
//

genewise output
Score 101.89 bits over entire alignment
Scores as bits over a synchronous coding model

Warning: The bits scores is not probablistically correct for single seqs
See WWW help for more info

SPP00000075_1.0   20 TLACGXFWGTEHMYRKYLNDRIVDCKVGYANGEESKKDSPSSVSYKRVC 
                     T A G +WGTEH++ +   D I   +VG+  G++  KD    V+Y+ V  
                     TFAAGCYWGTEHFFLRKFKDAIQSHQVGFMGGDD--KDV---VAYEDVK 
Cf_Contig616:s-10215 atgggtttgagcttccataggacaccggtagggg  agg   ggtggga 
                     ctccggaggcaatttgataactagaatgttggaa  aat   tcaaata 
                     cctccccgccgcccccgcgcgcgccgttcgcatc  gcg   gccgcgg 


SPP00000075_1.0   69 GGDTDFAEVLQVSYNPKVITLRELTDFFFRIHDPTTSNSQGPDKGTQYR 
                      G+T  AEV   +Y+P  ++  EL  +FFR+H+ TT N Q  D GT YR 
                     QGNTGHAEVFDFTYDPAKVSYEELLAYFFRMHNSTTLNRQEGDIGTNYR 
Cf_Contig616:s-10083 cgaagcgggtgtatgcgagttggccgtttcacataacaacgggagaatc 
                     agacgacattatcaaccatcaaattcattgtaaccctagaagatgcaag 
                     gccccccgcccccccacggccggttccccggcctggccgggtcccgccc 


SPP00000075_1.0  118 SGLFAHSDADLKEL-----------AKIKEEWQPKW-GNKIATVIEPIK 
                     S +F H+D   +E             K+   +   + G +  T +E    
                     SAIFFHNDEQKQEAEAYISRLNGADEKLHAAFAKAFDGKQCVTKLEKAG 
Cf_Contig616:su-9936 agattcaggcacggggtatacaggggaccggtgagtggactgaacgagg 
                     gctttaaaaaaaacacatcgtagcaaatacctcactagaagtcataacg 
                     ccccccccggggggggttaggctgcgggccatcggcccggtggggggtc 


SPP00000075_1.0  155 NFYDAEEYHQLYLDKNPQGY                              
                      FY A E HQ YL+KNP+GY                              
                     IFYPAHEAHQDYLEKNPRGY                              
Cf_Contig616:su-9789 attcgcggccgtcgaaccgt                              
                     ttaccaacaaaataaacgga                              
                     ccccacgatgtctggcgtcc                              


//
>Cf_Contig616:subseq(0,30000).[10215:9728].sp
ACCTTCGCTGCCGGCTGCTACTGGGGCACCGAGCACTTCTTCCTCCGCAAGTTCAAGGAC
GCGATCCAGAGCCACCAGGTTGGTTTCATGGGCGGAGATGACAAGGACGTGGTGGCCTAC
GAGGACGTGAAGCAGGGCAACACCGGCCACGCCGAGGTCTTCGACTTCACCTACGACCCA
GCCAAGGTGTCCTACGAGGAGCTTCTTGCCTACTTCTTCCGGATGCACAACTCTACGACG
CTCAACAGGCAGGAGGGTGACATCGGCACGAACTACCGCAGCGCCATCTTCTTCCACAAC
GACGAGCAGAAGCAGGAGGCGGAGGCGTATATTTCAAGGCTGAACGGTGCGGACGAGAAG
CTGCACGCCGCATTTGCCAAGGCGTTCGACGGCAAGCAGTGTGTGACGAAGCTGGAGAAG
GCTGGCATCTTCTACCCCGCACACGAGGCACATCAGGATTACCTTGAGAAGAACCCGCGT
GGCTAC
//
Cf_Contig616:subseq(0,30000)	GeneWise	match	10215	9730	114.86	-	.	Cf_Contig616:subseq(0,30000)-genewise-prediction-1
Cf_Contig616:subseq(0,30000)	GeneWise	cds	10215	9730	0.00	-	0	Cf_Contig616:subseq(0,30000)-genewise-prediction-1
//