genewise output
Score 154.45 bits over entire alignment
Scores as bits over a synchronous coding model

Warning: The bits scores is not probablistically correct for single seqs
See WWW help for more info

SPP00000012_1.0   66 QMAVFGMGXFWGAERKFWVLKGVYSTQVGFAGGYTSNPTYKEVCSEKTG 
                     + A F  G FWG E  F    GV  T VG+  G   NPTY++VC+ +TG 
                     ETATFAAGCFWGVELAFQRTDGVLQTTVGYTNGAVENPTYRQVCTGQTG 
gi|325181994|em10000 gagatgggtttgggtgtccagggccaaggtaaggggacatccgtagcag 
                     accctccggtggtatctagcagttacctgacagctaaccagatgcgacg 
                     ggtatgaactgctaattgcattctaactgtgtactgtgccaaccggacc 


SPP00000012_1.0  115 HAEVVRVVYQPEHMSFEELLKVFWENHDPTQGMRQGNDHGTQYRSAIYP 
                     HAE VRV +    + + +LLKVFW  HDPT   +Q ND GTQYRS IY  
                     HAEAVRVEFDISAVQYPDLLKVFWNIHDPTTLNQQKNDMGTQYRSGIYY 
gi|325181994|em10147 cggggcggtgatggctcgccagttaacgcaataccaagagactctgatt 
                     acactgtatatcctaacattattgataaccctaaaaaatgcaagcgtaa 
                     caattttattatttgcataaagtgctcttcggtgagctgcagtctactt 


SPP00000012_1.0  164 TSAKQMEAALSSKENYQKVLSEHGFGPITTDIREGQTFYYAEDYHQQYL 
                      + +Q + AL SKE Y K L++    PI T+I E  TF+ AE  HQ+YL 
                     HTEEQRKQALLSKEEYGKTLTK----PIVTEIEEASTFWPAEAEHQRYL 
gi|325181994|em10294 caggcaacgcttaggtgaataa    cagagagggaattcggggccctt 
                     acaaagaacttcaaaagactca    cttcataacgctgccacaaagat 
                     tcaaaagagtgcgaatagtaag    gtgggtagatctgatagatgccg 


SPP00000012_1.0  213 SKNPNGYCGLGGTGV                                   
                      K   G C   G G+                                   
                     EK--GGQCADKGCGI                                   
gi|325181994|em10429 ga  ggctggagtga                                   
                     aa  ggagcaagggt                                   
                     aa  atatgtattat                                   


//
>gi|325181994|emb|FR824067.1|:subseq(16446,30000).[10000:10467].sp
GAGACGGCTACATTTGCGGCAGGATGCTTTTGGGGCGTTGAATTAGCTTTTCAGCGCACA
GATGGTGTCCTTCAAACAACCGTTGGGTATACGAATGGAGCCGTTGAGAATCCGACCTAC
CGACAAGTCTGCACGGGGCAAACCGGCCACGCAGAAGCTGTTCGTGTTGAATTTGATATA
TCTGCTGTTCAGTACCCAGATCTACTAAAAGTGTTTTGGAACATTCACGATCCTACCACG
TTGAATCAGCAAAAGAACGATATGGGCACACAGTATCGCTCTGGAATCTATTATCATACC
GAAGAACAAAGAAAGCAAGCGCTTTTGTCCAAGGAAGAATATGGAAAGACTTTAACAAAG
CCGATTGTGACGGAGATTGAAGAGGCAAGTACCTTTTGGCCAGCTGAAGCGGAACATCAG
CGCTACTTGGAAAAAGGAGGTCAATGTGCGGATAAAGGTTGTGGAATT
//
gi|325181994|emb|FR824067.1|:subseq(16446,30000)	GeneWise	match	10000	10467	158.45	+	.	gi|325181994|emb|FR824067.1|:subseq(16446,30000)-genewise-prediction-1
gi|325181994|emb|FR824067.1|:subseq(16446,30000)	GeneWise	cds	10000	10467	0.00	+	0	gi|325181994|emb|FR824067.1|:subseq(16446,30000)-genewise-prediction-1
//

genewise output
Score 16.35 bits over entire alignment
Scores as bits over a synchronous coding model

Warning: The bits scores is not probablistically correct for single seqs
See WWW help for more info

SPP00000012_1.0    5 TRRACQLLLLHSLFPV                                  
                     T R  Q+ +L +LFP+                                  
                     TSRCPQMAVLTTLFPI                                  
gi|325181994|em-4178 atctccaggtaattca                                  
                     ccggcatcttccttct                                  
                     taattagatgatgcga                                  


//
>gi|325181994|emb|FR824067.1|:subseq(16446,30000).[4178:4129].sp
ACTTCACGATGTCCTCAAATGGCAGTTTTGACAACTTTGTTCCCGATA
//
gi|325181994|emb|FR824067.1|:subseq(16446,30000)	GeneWise	match	4178	4131	16.35	-	.	gi|325181994|emb|FR824067.1|:subseq(16446,30000)-genewise-prediction-1
gi|325181994|emb|FR824067.1|:subseq(16446,30000)	GeneWise	cds	4178	4131	0.00	-	0	gi|325181994|emb|FR824067.1|:subseq(16446,30000)-genewise-prediction-1
//