BLASTP 2.2.26+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Stephen F. Altschul, John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. RID: GVV076YH013 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 16,852,130 sequences; 5,788,275,850 total letters Query= scaffold_8:subseq(1436395,30000).pep Length=98 Score E Sequences producing significant alignments: (Bits) Value ref|XP_002179282.1| predicted protein [Phaeodactylum tricornu... 114 2e-31 gb|EGB09042.1| hypothetical protein AURANDRAFT_7822 [Aureococ... 94.4 1e-23 ref|YP_003130975.1| methionine sulfoxide reductase A [Halorha... 73.2 6e-15 ref|XP_002949120.1| peptide methionine-S-sulfoxide reductase ... 72.4 7e-15 gb|AAN32904.1| methionine-S-sulfoxide reductase MsrA1 [Chlamy... 72.4 8e-15 ref|YP_001865760.1| peptide methionine sulfoxide reductase [N... 72.0 1e-14 ref|YP_004826471.1| peptide methionine sulfoxide reductase ms... 72.4 1e-14 sp|Q9AJF7.1|MSRA_THEVU RecName: Full=Peptide methionine sulfo... 70.5 2e-14 ref|YP_003088124.1| peptide methionine sulfoxide reductase [D... 72.4 2e-14 ref|ZP_06903458.1| peptide-methionine (R)-S-oxide reductase [... 73.6 2e-14 ref|ZP_05401563.1| peptide methionine sulfoxide reductase [Cl... 73.6 3e-14 ref|YP_003291994.1| peptide methionine sulfoxide reductase [R... 71.6 3e-14 gb|EHJ25736.1| methionine-R-sulfoxide reductase [Clostridium ... 73.6 3e-14 ref|ZP_07406950.1| putative peptide methionine sulfoxide redu... 73.2 4e-14 ref|YP_003215050.1| peptide methionine sulfoxide reductase [C... 73.2 4e-14 ref|ZP_05330280.1| peptide methionine sulfoxide reductase [Cl... 73.2 4e-14 ref|ZP_05272235.1| peptide methionine sulfoxide reductase [Cl... 73.2 4e-14 ref|YP_001088679.1| msrAB gene product [Clostridium difficile... 73.2 4e-14 ref|YP_004615791.1| unnamed protein product [Methanosalsum zh... 69.7 8e-14 ref|ZP_01215157.1| Peptide methionine sulfoxide reductase [Ps... 70.1 8e-14 ref|YP_003849830.1| peptide methionine sulfoxide reductase [M... 69.7 9e-14 ref|ZP_01871559.1| methionine sulfoxide reductase A [Caminiba... 69.7 1e-13 ref|ZP_08560079.1| methionine sulfoxide reductase A [Halorhab... 69.7 1e-13 ref|YP_942863.1| peptide methionine sulfoxide reductase [Psyc... 69.7 1e-13 ref|YP_004256171.1| Peptide methionine sulfoxide reductase ms... 69.7 1e-13 ref|YP_004519713.1| peptide methionine sulfoxide reductase Ms... 68.9 2e-13 ref|ZP_08962026.1| peptide methionine sulfoxide reductase [Na... 69.3 2e-13 ref|ZP_08256927.1| peptide methionine sulfoxide reductase [Ca... 68.6 2e-13 ref|YP_003390105.1| peptide methionine sulfoxide reductase [S... 69.7 2e-13 ref|YP_001097623.1| peptide methionine sulfoxide reductase [M... 68.2 3e-13 ref|YP_003533688.1| peptide-methionine (S)-S-oxide reductase ... 68.6 3e-13 gb|ADI19511.1| peptide methionine sulfoxide reductase [uncult... 68.6 3e-13 ref|YP_001329313.1| peptide methionine sulfoxide reductase [M... 68.2 4e-13 ref|YP_003542155.1| peptide methionine sulfoxide reductase [M... 68.2 4e-13 ref|XP_002426843.1| EIP28, putative [Pediculus humanus corpor... 68.9 4e-13 ref|YP_003707342.1| peptide methionine sulfoxide reductase [M... 68.2 5e-13 ref|YP_003146651.1| peptide methionine sulfoxide reductase [K... 68.2 5e-13 ref|NP_280075.1| methionine sulfoxide reductase A [Halobacter... 68.2 5e-13 ref|YP_004847022.1| peptide methionine sulfoxide reductase [P... 68.2 5e-13 ref|YP_004742599.1| unnamed protein product [Methanococcus ma... 67.4 5e-13 ref|NP_275678.1| unnamed protein product [Methanothermobacter... 67.8 6e-13 ref|XP_002177204.1| predicted protein [Phaeodactylum tricornu... 65.5 6e-13 ref|NP_954202.1| methionine sulfoxide reductase A [Geobacter ... 67.4 6e-13 ref|YP_742147.1| peptide methionine sulfoxide reductase [Alka... 67.8 8e-13 ref|YP_001046995.1| peptide methionine sulfoxide reductase [M... 67.0 9e-13 ref|YP_003891181.1| peptide methionine sulfoxide reductase [S... 67.4 9e-13 ref|NP_001232951.1| uncharacterized protein LOC100164380 [Acy... 68.2 9e-13 ref|YP_003572863.1| peptide methionine sulfoxide reductase Ms... 68.6 9e-13 emb|CBK87459.1| methionine-S-sulfoxide reductase [Enterobacte... 67.0 1e-12 ref|YP_876251.1| peptide methionine sulfoxide reductase [Cena... 66.6 1e-12 ref|YP_004941754.1| unnamed protein product [Flavobacterium c... 67.0 1e-12 ref|YP_004836420.1| peptide methionine sulfoxide reductase Ms... 67.0 1e-12 ref|NP_987968.1| peptide methionine sulfoxide reductase [Meth... 66.6 1e-12 ref|YP_004950282.1| msrA gene product [Enterobacter cloacae E... 67.4 2e-12 ref|YP_687309.1| methionine sulfoxide reductase A [uncultured... 66.2 2e-12 ref|YP_002467288.1| peptide methionine sulfoxide reductase [M... 66.2 2e-12 ref|ZP_03086295.1| methionine sulfoxide reductase A [Escheric... 67.0 2e-12 gb|ADO77343.1| methionine-R-sulfoxide reductase [Halanaerobiu... 68.6 2e-12 ref|YP_003611138.1| methionine sulfoxide reductase A [Enterob... 66.2 2e-12 ref|YP_566932.1| peptide methionine sulfoxide reductase [Meth... 65.9 2e-12 ref|ZP_08497746.1| methionine-S-sulfoxide reductase [Enteroba... 67.0 2e-12 ref|XP_002502513.1| predicted protein [Micromonas sp. RCC299]... 66.2 2e-12 ref|YP_002261961.1| peptide methionine sulfoxide reductase MS... 67.0 2e-12 ref|YP_136589.1| methionine sulfoxide reductase A [Haloarcula... 66.2 2e-12 ref|ZP_08668191.1| Peptide methionine sulfoxide reductase [Ca... 65.9 2e-12 ref|YP_003737411.1| methionine sulfoxide reductase A [Halalka... 66.2 3e-12 ref|YP_002240824.1| methionine sulfoxide reductase A [Klebsie... 66.6 3e-12 ref|ZP_09347971.1| peptide methionine sulfoxide reductase msr... 66.6 3e-12 ref|YP_004274540.1| unnamed protein product [Pedobacter salta... 66.2 3e-12 ref|YP_001436362.1| methionine sulfoxide reductase A [Cronoba... 66.6 3e-12 ref|YP_445204.1| methionine-S-sulfoxide reductase [Salinibact... 66.6 3e-12 ref|YP_001582329.1| peptide methionine sulfoxide reductase [N... 65.5 3e-12 ref|ZP_03698474.1| peptide methionine sulfoxide reductase [Lu... 65.9 3e-12 ref|ZP_06067426.1| peptide-methionine (S)-S-oxide reductase [... 65.9 3e-12 gb|EGL71968.1| methionine sulfoxide reductase A [Cronobacter ... 66.2 4e-12 ref|YP_003571145.1| peptide methionine sulfoxide reductase Ms... 66.6 4e-12 ref|YP_004059011.1| peptide methionine sulfoxide reductase [S... 65.9 4e-12 ref|YP_004826973.1| peptide methionine sulfoxide reductase Ms... 66.2 4e-12 ref|YP_001338233.1| msrA gene product [Klebsiella pneumoniae ... 66.6 4e-12 ref|YP_002917432.1| methionine sulfoxide reductase A [Klebsie... 66.6 4e-12 ref|XP_001767588.1| predicted protein [Physcomitrella patens ... 65.5 4e-12 ref|YP_001455126.1| hypothetical protein CKO_03611 [Citrobact... 65.5 5e-12 ref|YP_002385307.1| methionine sulfoxide reductase A [Escheri... 66.2 5e-12 ref|XP_001446908.1| hypothetical protein [Paramecium tetraure... 65.5 5e-12 ref|YP_003212012.1| methionine sulfoxide reductase A [Cronoba... 66.2 5e-12 ref|YP_064963.1| bifunctional methionine sulfoxide reductase ... 67.4 5e-12 emb|CBX28137.1| Peptide methionine sulfoxide reductase msrA/m... 67.4 5e-12 ref|YP_003125663.1| peptide methionine sulfoxide reductase [C... 66.2 6e-12 sp|Q4J9L3.2|MSRA_SULAC RecName: Full=Peptide methionine sulfo... 65.1 6e-12 gb|AET64963.1| Peptide methionine sulfoxide reductase MsrA [M... 65.1 6e-12 gb|EGC97639.1| methionine sulfoxide reductase A [Escherichia ... 65.9 7e-12 ref|YP_003260919.1| methionine sulfoxide reductase A [Pectoba... 65.9 7e-12 ref|YP_004383182.1| peptide methionine sulfoxide reductase Ms... 67.0 7e-12 ref|YP_003727183.1| peptide methionine sulfoxide reductase [M... 64.7 7e-12 ref|YP_002331999.1| msrA gene product [Escherichia coli O127:... 65.5 7e-12 ref|NP_290851.1| msrA gene product [Escherichia coli O157:H7 ... 65.5 7e-12 ref|YP_003304230.1| peptide methionine sulfoxide reductase [S... 65.1 8e-12 ref|YP_003893415.1| peptide methionine sulfoxide reductase [M... 64.7 8e-12 gb|ACI73229.1| peptide methionine sulfoxide reductase [Escher... 65.5 8e-12 ref|YP_672314.1| methionine sulfoxide reductase A [Escherichi... 65.5 8e-12 ALIGNMENTS >ref|XP_002179282.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gb|EEC49105.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length=145 Score = 114 bits (284), Expect = 2e-31, Method: Compositional matrix adjust. Identities = 49/98 (50%), Positives = 73/98 (74%), Gaps = 5/98 (5%) Query 1 ASFGMGCFWEPAESMLKVDGIIDTVSGYTGNKRFDDDKKKTVPSYENVCYGQDWVEGVQV 60 A+FGMGCFW+P+E +LKV G+ +T++GYTG ++ P+YE+VC+ +WVEGV+V Sbjct 1 ATFGMGCFWKPSEELLKVPGVTETIAGYTGKA-----NAESPPNYESVCFSYEWVEGVRV 55 Query 61 TYDDSVISYGELLNVFFDKQKPAPQSRQYSSIIFPYDE 98 YD++ + Y LL+ FF+ Q+P SRQYSS+IFP+D+ Sbjct 56 VYDETQLEYDALLDAFFEAQEPKLGSRQYSSVIFPHDD 93 >gb|EGB09042.1| hypothetical protein AURANDRAFT_7822 [Aureococcus anophagefferens] Length=139 Score = 94.4 bits (233), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 47/97 (48%), Positives = 62/97 (64%), Gaps = 5/97 (5%) Query 1 ASFGMGCFWEPAESMLKVDGIIDTVSGYTGNKRFDDDKKKTVPSYENVCYGQDWVEGVQV 60 A+ G+GCFW P+E +L V+G++DT GY G F D + PSY +VC G VE VQV Sbjct 1 ATLGLGCFWAPSEELLGVEGVVDTCCGYAG-AVFPDAR----PSYASVCGGDGNVEAVQV 55 Query 61 TYDDSVISYGELLNVFFDKQKPAPQSRQYSSIIFPYD 97 TYDD+V+SY +L+ F KP SRQY+ I+F D Sbjct 56 TYDDAVVSYEAVLDAAFAASKPVLGSRQYAPIVFASD 92 >ref|YP_003130975.1| methionine sulfoxide reductase A [Halorhabdus utahensis DSM 12940] gb|ACV12242.1| peptide methionine sulfoxide reductase [Halorhabdus utahensis DSM 12940] Length=175 Score = 73.2 bits (178), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 44/106 (42%), Positives = 53/106 (50%), Gaps = 15/106 (14%) Query 1 ASFGMGCFWEPAESMLKVDGIIDTVSGYTGNKRFDDDKKKTVPSYENVCYGQD-WVEGVQ 59 A+FG GCFW +M ++DG+ SGY G D PSY VC G E VQ Sbjct 4 ATFGGGCFWCTEAAMKELDGVASVTSGYAGGHAED-------PSYRAVCSGDTGHAEVVQ 56 Query 60 VTYDDSVISYGELLNVFFDKQKPAPQSR-------QYSSIIFPYDE 98 V YD VI+Y ELL VFF P +R QY SI+ +DE Sbjct 57 VEYDPDVITYDELLEVFFATHDPTQLNRQGPDVGTQYRSIVLYHDE 102 >ref|XP_002949120.1| peptide methionine-S-sulfoxide reductase [Volvox carteri f. nagariensis] gb|EFJ49613.1| peptide methionine-S-sulfoxide reductase [Volvox carteri f. nagariensis] Length=157 Score = 72.4 bits (176), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 37/99 (37%), Positives = 56/99 (57%), Gaps = 8/99 (8%) Query 1 ASFGMGCFWEPAESMLKVDGIIDTVSGYTGNKRFDDDKKKTVPSYENVCYGQDWVEGVQV 60 A+F +G FW P S K+ G++ T GYTG + P+Y +VC G E +++ Sbjct 11 ATFALGUFWHPEASFAKLPGVVKTRVGYTGGTSPN-------PTYGSVCAGDGHTEALRI 63 Query 61 TYDDSVISYGELLNVFFDKQKPAPQSR-QYSSIIFPYDE 98 YD SV+SY ELL +FF P +++ QY S I+ ++E Sbjct 64 WYDPSVVSYEELLKMFFRDHDPTHRTKCQYKSAIWYHNE 102 >gb|AAN32904.1| methionine-S-sulfoxide reductase MsrA1 [Chlamydomonas reinhardtii] Length=160 Score = 72.4 bits (176), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 37/99 (37%), Positives = 56/99 (57%), Gaps = 8/99 (8%) Query 1 ASFGMGCFWEPAESMLKVDGIIDTVSGYTGNKRFDDDKKKTVPSYENVCYGQDWVEGVQV 60 A+F +G FW P S V G++ T GYTG R + P+YE+VC G E ++V Sbjct 14 ATFALGUFWHPEASFANVPGVVKTRVGYTGGSRPN-------PTYESVCAGDGHTEAMRV 66 Query 61 TYDDSVISYGELLNVFFDKQKPAPQSR-QYSSIIFPYDE 98 +D ++ISY +LL FF + P +S+ QY S ++ + E Sbjct 67 WFDPAIISYEDLLKQFFREHDPTQKSKCQYKSAVWYHSE 105 >ref|YP_001865760.1| peptide methionine sulfoxide reductase [Nostoc punctiforme PCC 73102] gb|ACC80817.1| peptide methionine sulfoxide reductase [Nostoc punctiforme PCC 73102] Length=163 Score = 72.0 bits (175), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 38/102 (37%), Positives = 57/102 (56%), Gaps = 15/102 (15%) Query 1 ASFGMGCFWEPAESMLKVDGIIDTVSGYTGNKRFDDDKKKTVPSYENVCYGQD-WVEGVQ 59 A+FG GCFW + +V G+ T GY+G D+ P+YE+VC G+ E V+ Sbjct 9 ATFGAGCFWGVEAAFRQVKGVTSTAVGYSGG-HLDN------PTYEDVCRGKTGHAEAVE 61 Query 60 VTYDDSVISYGELLNVFFDKQKPAPQSR-------QYSSIIF 94 V Y+ +++SY +LLNVF++K P + QY S+IF Sbjct 62 VEYNPAIVSYDQLLNVFWNKHNPTASNHEELNVGYQYRSVIF 103 >ref|YP_004826471.1| peptide methionine sulfoxide reductase msrA [Rhodothermus marinus SG0.5JP17-172] gb|AEN74634.1| Peptide methionine sulfoxide reductase msrA [Rhodothermus marinus SG0.5JP17-172] Length=186 Score = 72.4 bits (176), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 44/106 (42%), Positives = 54/106 (51%), Gaps = 15/106 (14%) Query 1 ASFGMGCFWEPAESMLKVDGIIDTVSGYTGNKRFDDDKKKTVPSYENVCYGQD-WVEGVQ 59 A+ G GCFW + L++ G+ D V GY G D P+YE VC G E VQ Sbjct 9 ATLGGGCFWCLEAAFLELRGVTDVVPGYAGGHVPD-------PTYEQVCMGTTGHAEVVQ 61 Query 60 VTYDDSVISYGELLNVFFDKQKPAPQSR-------QYSSIIFPYDE 98 +T+D SVISY +LL VFF P R QY SII +DE Sbjct 62 ITFDPSVISYRDLLEVFFALHDPTTPDRQGNDVGPQYRSIILYHDE 107 >sp|Q9AJF7.1|MSRA_THEVU RecName: Full=Peptide methionine sulfoxide reductase MsrA; Short=Protein-methionine-S-oxide reductase; AltName: Full=Peptide-methionine (S)-S-oxide reductase; Short=Peptide Met(O) reductase dbj|BAB40633.1| peptide methionine sulfoxide reductase-homolog protein [Thermoactinomyces vulgaris] Length=123 Score = 70.5 bits (171), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 39/89 (44%), Positives = 49/89 (55%), Gaps = 8/89 (9%) Query 1 ASFGMGCFWEPAESMLKVDGIIDTVSGYTGNKRFDDDKKKTVPSYENVCYGQD-WVEGVQ 59 A+FG GCFW E+ +V G+IDT GY G + P+YE VC + E VQ Sbjct 2 ATFGAGCFWGVEETFRQVPGVIDTAVGYMGGTTEN-------PTYEEVCTDKTGHAEVVQ 54 Query 60 VTYDDSVISYGELLNVFFDKQKPAPQSRQ 88 V YD +SY ELLNVF+D P +RQ Sbjct 55 VEYDPEQVSYEELLNVFWDNHNPTTLNRQ 83 >ref|YP_003088124.1| peptide methionine sulfoxide reductase [Dyadobacter fermentans DSM 18053] gb|ACT94959.1| peptide methionine sulfoxide reductase [Dyadobacter fermentans DSM 18053] Length=228 Score = 72.4 bits (176), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 43/102 (42%), Positives = 52/102 (51%), Gaps = 15/102 (15%) Query 1 ASFGMGCFWEPAESMLKVDGIIDTVSGYTGNKRFDDDKKKTVPSYENVCYGQD-WVEGVQ 59 A+FG GCFW M +DG+ VSGY+G + PSY+ VC G E V+ Sbjct 54 ATFGTGCFWCTEAVMESLDGVKKVVSGYSGGHDPN-------PSYKAVCTGTTGHAECVE 106 Query 60 VTYDDSVISYGELLNVFFDKQKPAPQSR-------QYSSIIF 94 VTYD VISY ELL FF P +R QY S+IF Sbjct 107 VTYDPKVISYAELLEAFFRSHDPTTLNRQGNDVGTQYRSVIF 148 >ref|ZP_06903458.1| peptide-methionine (R)-S-oxide reductase [Clostridium difficile NAP07] gb|EFH15463.1| peptide-methionine (R)-S-oxide reductase [Clostridium difficile NAP07] Length=319 Score = 73.6 bits (179), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 42/106 (40%), Positives = 58/106 (55%), Gaps = 15/106 (14%) Query 1 ASFGMGCFWEPAESMLKVDGIIDTVSGYTGNKRFDDDKKKTVPSYENVCYGQD-WVEGVQ 59 A+F GCFW + K DG+I +SGYTG + P+Y+ VC G VE +Q Sbjct 7 ATFAGGCFWCMVKPFDKYDGVIKVISGYTGGHIEN-------PTYQEVCSGTTGHVEAIQ 59 Query 60 VTYDDSVISYGELLNVFFDKQKP-------APQSRQYSSIIFPYDE 98 +TYDD +ISY ELLN+F+ + P + QY + IF +DE Sbjct 60 ITYDDDIISYDELLNIFWKQINPTDDGGQFGDRGTQYKTAIFYHDE 105 >ref|ZP_05401563.1| peptide methionine sulfoxide reductase [Clostridium difficile QCD-23m63] ref|ZP_06892169.1| peptide-methionine (R)-S-oxide reductase [Clostridium difficile NAP08] gb|EFH07513.1| peptide-methionine (R)-S-oxide reductase [Clostridium difficile NAP08] Length=317 Score = 73.6 bits (179), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 42/106 (40%), Positives = 58/106 (55%), Gaps = 15/106 (14%) Query 1 ASFGMGCFWEPAESMLKVDGIIDTVSGYTGNKRFDDDKKKTVPSYENVCYGQD-WVEGVQ 59 A+F GCFW + K DG+I +SGYTG + P+Y+ VC G VE +Q Sbjct 5 ATFAGGCFWCMVKPFDKYDGVIKVISGYTGGHIEN-------PTYQEVCSGTTGHVEAIQ 57 Query 60 VTYDDSVISYGELLNVFFDKQKP-------APQSRQYSSIIFPYDE 98 +TYDD +ISY ELLN+F+ + P + QY + IF +DE Sbjct 58 ITYDDDIISYDELLNIFWKQINPTDDGGQFGDRGTQYKTAIFYHDE 103 >ref|YP_003291994.1| peptide methionine sulfoxide reductase [Rhodothermus marinus DSM 4252] gb|ACY49606.1| peptide methionine sulfoxide reductase [Rhodothermus marinus DSM 4252] Length=183 Score = 71.6 bits (174), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 43/106 (41%), Positives = 54/106 (51%), Gaps = 15/106 (14%) Query 1 ASFGMGCFWEPAESMLKVDGIIDTVSGYTGNKRFDDDKKKTVPSYENVCYGQD-WVEGVQ 59 A+ G GCFW + L++ G+ D V GY G D P+YE VC G E VQ Sbjct 8 ATLGGGCFWCLEAAFLELRGVTDVVPGYAGGHVPD-------PTYEQVCTGTTGHAEVVQ 60 Query 60 VTYDDSVISYGELLNVFFDKQKPAPQSR-------QYSSIIFPYDE 98 +T+D S+ISY +LL VFF P R QY SII +DE Sbjct 61 ITFDPSIISYRDLLEVFFALHDPTTPDRQGNDVGPQYRSIILYHDE 106 >gb|EHJ25736.1| methionine-R-sulfoxide reductase [Clostridium difficile 002-P50-2011] gb|EHJ26783.1| methionine-R-sulfoxide reductase [Clostridium difficile 050-P50-2011] Length=319 Score = 73.6 bits (179), Expect = 3e-14, Method: Compositional matrix adjust. Identities = 42/106 (40%), Positives = 58/106 (55%), Gaps = 15/106 (14%) Query 1 ASFGMGCFWEPAESMLKVDGIIDTVSGYTGNKRFDDDKKKTVPSYENVCYGQD-WVEGVQ 59 A+F GCFW + K DG+I VSGYTG + P+Y+ VC G +E +Q Sbjct 7 ATFAGGCFWCMVKPFDKYDGVIKVVSGYTGGHLEN-------PTYQEVCSGTTGHLEAIQ 59 Query 60 VTYDDSVISYGELLNVFFDKQKP-------APQSRQYSSIIFPYDE 98 +TYDD +ISY ELLN+F+ + P + QY + IF +DE Sbjct 60 ITYDDDIISYDELLNIFWKQINPTDDGGQFGDRGTQYKTAIFYHDE 105 >ref|ZP_07406950.1| putative peptide methionine sulfoxide reductase [Clostridium difficile QCD-32g58] Length=316 Score = 73.2 bits (178), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 42/106 (40%), Positives = 58/106 (55%), Gaps = 15/106 (14%) Query 1 ASFGMGCFWEPAESMLKVDGIIDTVSGYTGNKRFDDDKKKTVPSYENVCYGQD-WVEGVQ 59 A+F GCFW + K DG+I VSGYTG + P+Y+ VC G +E +Q Sbjct 5 ATFAGGCFWCMVKPFDKYDGVIKVVSGYTGGHVEN-------PTYQEVCSGTTGHLEAIQ 57 Query 60 VTYDDSVISYGELLNVFFDKQKP-------APQSRQYSSIIFPYDE 98 +TYDD +ISY ELLN+F+ + P + QY + IF +DE Sbjct 58 ITYDDDIISYDELLNIFWKQINPTDDGGQFGDRGTQYKTAIFYHDE 103 >ref|YP_003215050.1| peptide methionine sulfoxide reductase [Clostridium difficile CD196] ref|YP_003218559.1| peptide methionine sulfoxide reductase [Clostridium difficile R20291] emb|CBA63893.1| putative peptide methionine sulfoxide reductase [Clostridium difficile CD196] emb|CBE05111.1| putative peptide methionine sulfoxide reductase [Clostridium difficile R20291] Length=319 Score = 73.2 bits (178), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 42/106 (40%), Positives = 58/106 (55%), Gaps = 15/106 (14%) Query 1 ASFGMGCFWEPAESMLKVDGIIDTVSGYTGNKRFDDDKKKTVPSYENVCYGQD-WVEGVQ 59 A+F GCFW + K DG+I VSGYTG + P+Y+ VC G +E +Q Sbjct 7 ATFAGGCFWCMVKPFDKYDGVIKVVSGYTGGHVEN-------PTYQEVCSGTTGHLEAIQ 59 Query 60 VTYDDSVISYGELLNVFFDKQKP-------APQSRQYSSIIFPYDE 98 +TYDD +ISY ELLN+F+ + P + QY + IF +DE Sbjct 60 ITYDDDIISYDELLNIFWKQINPTDDGGQFGDRGTQYKTAIFYHDE 105 >ref|ZP_05330280.1| peptide methionine sulfoxide reductase [Clostridium difficile QCD-63q42] ref|ZP_05351350.1| peptide methionine sulfoxide reductase [Clostridium difficile ATCC 43255] Length=317 Score = 73.2 bits (178), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 42/106 (40%), Positives = 58/106 (55%), Gaps = 15/106 (14%) Query 1 ASFGMGCFWEPAESMLKVDGIIDTVSGYTGNKRFDDDKKKTVPSYENVCYGQD-WVEGVQ 59 A+F GCFW + K DG+I VSGYTG + P+Y+ VC G +E +Q Sbjct 5 ATFAGGCFWCMVKPFDKYDGVIKVVSGYTGGHVEN-------PTYQEVCSGTTGHLEAIQ 57 Query 60 VTYDDSVISYGELLNVFFDKQKP-------APQSRQYSSIIFPYDE 98 +TYDD +ISY ELLN+F+ + P + QY + IF +DE Sbjct 58 ITYDDDIISYDELLNIFWKQINPTDDGGQFGDRGTQYKTAIFYHDE 103 >ref|ZP_05272235.1| peptide methionine sulfoxide reductase [Clostridium difficile QCD-66c26] ref|ZP_05322628.1| peptide methionine sulfoxide reductase [Clostridium difficile CIP 107932] ref|ZP_05356475.1| peptide methionine sulfoxide reductase [Clostridium difficile QCD-76w55] ref|ZP_05385242.1| peptide methionine sulfoxide reductase [Clostridium difficile QCD-97b34] ref|ZP_05397579.1| peptide methionine sulfoxide reductase [Clostridium difficile QCD-37x79] Length=317 Score = 73.2 bits (178), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 42/106 (40%), Positives = 58/106 (55%), Gaps = 15/106 (14%) Query 1 ASFGMGCFWEPAESMLKVDGIIDTVSGYTGNKRFDDDKKKTVPSYENVCYGQD-WVEGVQ 59 A+F GCFW + K DG+I VSGYTG + P+Y+ VC G +E +Q Sbjct 5 ATFAGGCFWCMVKPFDKYDGVIKVVSGYTGGHVEN-------PTYQEVCSGTTGHLEAIQ 57 Query 60 VTYDDSVISYGELLNVFFDKQKP-------APQSRQYSSIIFPYDE 98 +TYDD +ISY ELLN+F+ + P + QY + IF +DE Sbjct 58 ITYDDDIISYDELLNIFWKQINPTDDGGQFGDRGTQYKTAIFYHDE 103 >ref|YP_001088679.1| msrAB gene product [Clostridium difficile 630] emb|CAJ69050.1| Peptide methionine sulfoxide reductase MsrA/MsrB [Clostridium difficile] gb|EHJ40912.1| methionine-R-sulfoxide reductase [Clostridium difficile 70-100-2010] Length=319 Score = 73.2 bits (178), Expect = 4e-14, Method: Compositional matrix adjust. Identities = 42/106 (40%), Positives = 58/106 (55%), Gaps = 15/106 (14%) Query 1 ASFGMGCFWEPAESMLKVDGIIDTVSGYTGNKRFDDDKKKTVPSYENVCYGQD-WVEGVQ 59 A+F GCFW + K DG+I VSGYTG + P+Y+ VC G +E +Q Sbjct 7 ATFAGGCFWCMVKPFDKYDGVIKVVSGYTGGHVEN-------PTYQEVCSGTTGHLEAIQ 59 Query 60 VTYDDSVISYGELLNVFFDKQKP-------APQSRQYSSIIFPYDE 98 +TYDD +ISY ELLN+F+ + P + QY + IF +DE Sbjct 60 ITYDDDIISYDELLNIFWKQINPTDDGGQFGDRGTQYKTAIFYHDE 105 >ref|YP_004615791.1| unnamed protein product [Methanosalsum zhilinae DSM 4017] gb|AEH60572.1| peptide methionine sulfoxide reductase [Methanosalsum zhilinae DSM 4017] Length=151 Score = 69.7 bits (169), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 40/106 (38%), Positives = 58/106 (55%), Gaps = 15/106 (14%) Query 1 ASFGMGCFWEPAESMLKVDGIIDTVSGYTGNKRFDDDKKKTVPSYENVCYGQD-WVEGVQ 59 A+F GCFW +S KV+G+I T GY G + P+Y+ V G+ E V+ Sbjct 4 ATFAAGCFWGVEDSFRKVEGVISTRVGYAGGHTEN-------PTYKEVSTGRTGHAESVE 56 Query 60 VTYDDSVISYGELLNVFFDKQKPAPQSR-------QYSSIIFPYDE 98 + YD S++SY ELL++F+D P +R QY SIIF ++E Sbjct 57 IIYDPSIVSYKELLDIFWDVHDPTQVNRQGPDIGSQYRSIIFYHNE 102 >ref|ZP_01215157.1| Peptide methionine sulfoxide reductase [Psychromonas sp. CNPT3] gb|EAS40102.1| Peptide methionine sulfoxide reductase [Psychromonas sp. CNPT3] Length=179 Score = 70.1 bits (170), Expect = 8e-14, Method: Compositional matrix adjust. Identities = 41/105 (39%), Positives = 55/105 (52%), Gaps = 15/105 (14%) Query 1 ASFGMGCFWEPAESMLKVDGIIDTVSGYTGNKRFDDDKKKTVPSYENVCYGQD-WVEGVQ 59 A+F GCFW S ++G+I+ SGYTG + P+YE +C G+ E VQ Sbjct 6 ATFAGGCFWCIEASFNHLNGVIEARSGYTGGDIIE-------PTYEQICTGKTGHAEAVQ 58 Query 60 VTYDDSVISYGELLNVFFDKQKPAPQSR-------QYSSIIFPYD 97 VTYD + ISY ELL +FF + +R QY S IF +D Sbjct 59 VTYDSTKISYTELLLIFFSLHDASQLNRQGADIGSQYRSAIFFHD 103 >ref|YP_003849830.1| peptide methionine sulfoxide reductase [Methanothermobacter marburgensis str. Marburg] gb|ADL58517.1| peptide methionine sulfoxide reductase [Methanothermobacter marburgensis str. Marburg] Length=163 Score = 69.7 bits (169), Expect = 9e-14, Method: Compositional matrix adjust. Identities = 38/106 (36%), Positives = 59/106 (56%), Gaps = 15/106 (14%) Query 1 ASFGMGCFWEPAESMLKVDGIIDTVSGYTGNKRFDDDKKKTVPSYENVCYG-QDWVEGVQ 59 A+FG GCFW ++ ++ G++ T GY G + P+YE+VC G E V+ Sbjct 7 ATFGAGCFWGVEDAFRRIRGVVSTRVGYMGGHMKN-------PTYEDVCTGLTGHAEVVE 59 Query 60 VTYDDSVISYGELLNVFFDKQKPAPQSR-------QYSSIIFPYDE 98 VT+D +++SY ELL+VF+ P +R QY S+IF +D+ Sbjct 60 VTFDPALVSYSELLDVFWSIHDPTSLNRQGPDVGEQYRSVIFYHDD 105 >ref|ZP_01871559.1| methionine sulfoxide reductase A [Caminibacter mediatlanticus TB-2] gb|EDM24116.1| methionine sulfoxide reductase A [Caminibacter mediatlanticus TB-2] Length=168 Score = 69.7 bits (169), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 43/106 (41%), Positives = 55/106 (52%), Gaps = 15/106 (14%) Query 1 ASFGMGCFWEPAESMLKVDGIIDTVSGYTGNKRFDDDKKKTVPSYENVCYG-QDWVEGVQ 59 A FG GCFW KVDG+ + V GY G +R + P+YE VC G E V+ Sbjct 4 AVFGGGCFWCLDAIFRKVDGVREVVCGYAGGRRPN-------PTYEQVCTGVTGHAEVVE 56 Query 60 VTYDDSVISYGELLNVFFDKQKPAPQSR-------QYSSIIFPYDE 98 + YD++ ISY ELL++FF P +R QY SII DE Sbjct 57 IDYDENKISYEELLDIFFQIHDPTQLNRQGNDIGTQYRSIILYLDE 102 >ref|ZP_08560079.1| methionine sulfoxide reductase A [Halorhabdus tiamatea SARL4B] gb|EGM34578.1| methionine sulfoxide reductase A [Halorhabdus tiamatea SARL4B] Length=175 Score = 69.7 bits (169), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 42/106 (40%), Positives = 53/106 (50%), Gaps = 15/106 (14%) Query 1 ASFGMGCFWEPAESMLKVDGIIDTVSGYTGNKRFDDDKKKTVPSYENVCYGQD-WVEGVQ 59 A+FG GCFW +M ++DG+ SGY G + PSY VC G E VQ Sbjct 4 ATFGGGCFWCTEAAMKELDGVASVTSGYAGGHAEN-------PSYRAVCSGDTGHAEVVQ 56 Query 60 VTYDDSVISYGELLNVFFDKQKPAPQSR-------QYSSIIFPYDE 98 V YD VI+Y ELL VFF P +R QY SI+ +D+ Sbjct 57 VEYDPDVITYDELLEVFFATHDPTQLNRQGPDVGTQYRSIVLYHDD 102 >ref|YP_942863.1| peptide methionine sulfoxide reductase [Psychromonas ingrahamii 37] gb|ABM03264.1| peptide methionine sulfoxide reductase [Psychromonas ingrahamii 37] Length=182 Score = 69.7 bits (169), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 41/105 (39%), Positives = 53/105 (50%), Gaps = 15/105 (14%) Query 1 ASFGMGCFWEPAESMLKVDGIIDTVSGYTGNKRFDDDKKKTVPSYENVCYGQD-WVEGVQ 59 A+F GCFW + + G+ VSGYTG K P+Y ++C G E VQ Sbjct 6 ATFAGGCFWCMEAAFNALKGVKSAVSGYTGGK-------TDSPTYADICTGTSGHAEVVQ 58 Query 60 VTYDDSVISYGELLNVFFDKQKPAPQSR-------QYSSIIFPYD 97 +T+DDSVISY ELL +FF +R QY S IF +D Sbjct 59 ITFDDSVISYAELLTIFFSLHDATQLNRQGHDIGTQYRSAIFYHD 103 >ref|YP_004256171.1| Peptide methionine sulfoxide reductase msrA [Deinococcus proteolyticus MRP] gb|ADY26554.1| Peptide methionine sulfoxide reductase msrA [Deinococcus proteolyticus MRP] Length=181 Score = 69.7 bits (169), Expect = 1e-13, Method: Compositional matrix adjust. Identities = 40/103 (39%), Positives = 53/103 (51%), Gaps = 15/103 (15%) Query 1 ASFGMGCFWEPAESMLKVDGIIDTVSGYTGNKRFDDDKKKTVPSYENVCYG-QDWVEGVQ 59 A F GCFW ML+V G+ SGY G +R + PSYE VC G E V+ Sbjct 10 AIFAGGCFWCTEAVMLRVRGVQQVESGYIGGRRPN-------PSYEQVCTGVTGHAEAVR 62 Query 60 VTYDDSVISYGELLNVFFDKQKPAPQSR-------QYSSIIFP 95 VT+D + +SY +LL++FF P +R QY S +FP Sbjct 63 VTFDPAEVSYRDLLHIFFGTHDPTTLNRQGADRGTQYRSALFP 105 >ref|YP_004519713.1| peptide methionine sulfoxide reductase MsrA [Methanobacterium sp. SWAN-1] gb|AEG17912.1| Peptide methionine sulfoxide reductase msrA [Methanobacterium sp. SWAN-1] Length=161 Score = 68.9 bits (167), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 41/106 (39%), Positives = 59/106 (56%), Gaps = 15/106 (14%) Query 1 ASFGMGCFWEPAESMLKVDGIIDTVSGYTGNKRFDDDKKKTVPSYENVCYGQD-WVEGVQ 59 ASF GCFW + ++ G++DT GY G F++ P Y +VC G+ E V+ Sbjct 9 ASFAAGCFWGVEAAFRQLKGVVDTRVGYMGGN-FEN------PKYGDVCSGRTGHAESVE 61 Query 60 VTYDDSVISYGELLNVFFDKQKPAPQSR-------QYSSIIFPYDE 98 VTYD S+I Y ELL+VF++ P +R QY S+IF ++E Sbjct 62 VTYDPSIILYDELLDVFWELHDPTTPNRQGPDIGEQYRSVIFYHNE 107 >ref|ZP_08962026.1| peptide methionine sulfoxide reductase [Natrinema pellirubrum DSM 15624] gb|EHA75002.1| peptide methionine sulfoxide reductase [Natrinema pellirubrum DSM 15624] Length=176 Score = 69.3 bits (168), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 42/106 (40%), Positives = 53/106 (50%), Gaps = 15/106 (14%) Query 1 ASFGMGCFWEPAESMLKVDGIIDTVSGYTGNKRFDDDKKKTVPSYENVCYGQD-WVEGVQ 59 A+FG GCFW +M +++G+ SGY G D PSY VC G E VQ Sbjct 4 ATFGGGCFWCTEAAMKELEGVDAVTSGYAGGHVED-------PSYREVCSGNTGHAEVVQ 56 Query 60 VTYDDSVISYGELLNVFFDKQKPAPQSR-------QYSSIIFPYDE 98 V YD VI+Y ELL VFF P +R QY SI+ +D+ Sbjct 57 VEYDPDVIAYDELLEVFFATHDPTQLNRQGPDVGTQYRSIVLAHDD 102 >ref|ZP_08256927.1| peptide methionine sulfoxide reductase [Candidatus Nitrosoarchaeum limnia SFB1] gb|EGG42509.1| peptide methionine sulfoxide reductase [Candidatus Nitrosoarchaeum limnia SFB1] Length=151 Score = 68.6 bits (166), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 42/106 (40%), Positives = 53/106 (50%), Gaps = 15/106 (14%) Query 1 ASFGMGCFWEPAESMLKVDGIIDTVSGYTGNKRFDDDKKKTVPSYENVCY-GQDWVEGVQ 59 A+FG GCFW + + K G+ T GY G K + P+YE VC E VQ Sbjct 3 ATFGAGCFWHVEDLLRKTKGVKSTQVGYIGGKLSN-------PTYEEVCTDTTGHAEAVQ 55 Query 60 VTYDDSVISYGELLNVFFDKQKPAPQSR-------QYSSIIFPYDE 98 V YD + ISY ELL VF++ P +R QY S IF +DE Sbjct 56 VEYDPNEISYDELLQVFWNNHDPTTLNRQGPDIGNQYRSAIFFHDE 101 >ref|YP_003390105.1| peptide methionine sulfoxide reductase [Spirosoma linguale DSM 74] gb|ADB41306.1| peptide methionine sulfoxide reductase [Spirosoma linguale DSM 74] Length=225 Score = 69.7 bits (169), Expect = 2e-13, Method: Compositional matrix adjust. Identities = 40/106 (38%), Positives = 55/106 (52%), Gaps = 15/106 (14%) Query 1 ASFGMGCFWEPAESMLKVDGIIDTVSGYTGNKRFDDDKKKTVPSYENVCYGQD-WVEGVQ 59 A+FG GCFW +DG+I VSGY G + + P+Y+ VC G E V+ Sbjct 49 ATFGTGCFWCTEALYESLDGVIGAVSGYEGGHKAN-------PTYKEVCTGTTGHAECVE 101 Query 60 VTYDDSVISYGELLNVFFDKQKPAPQSR-------QYSSIIFPYDE 98 VTYD + I+Y ELL FF P +R QY S+IF +++ Sbjct 102 VTYDPAKITYQELLEAFFRSHDPTSLNRQGEDVGTQYRSVIFYHND 147 >ref|YP_001097623.1| peptide methionine sulfoxide reductase [Methanococcus maripaludis C5] sp|A4FYX5.1|MSRA_METM5 RecName: Full=Peptide methionine sulfoxide reductase MsrA; Short=Protein-methionine-S-oxide reductase; AltName: Full=Peptide-methionine (S)-S-oxide reductase; Short=Peptide Met(O) reductase gb|ABO35409.1| peptide methionine sulfoxide reductase [Methanococcus maripaludis C5] Length=157 Score = 68.2 bits (165), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 38/106 (36%), Positives = 55/106 (52%), Gaps = 15/106 (14%) Query 1 ASFGMGCFWEPAESMLKVDGIIDTVSGYTGNKRFDDDKKKTVPSYENVCYGQD-WVEGVQ 59 A FGMGCFW E K+ G+I T G+ G + P+Y VC G+ +E V Sbjct 7 AVFGMGCFWSAEELFRKIKGVISTEVGFMGGTVKN-------PTYGQVCRGKSGHIEVVN 59 Query 60 VTYDDSVISYGELLNVFFDKQKPAPQSR-------QYSSIIFPYDE 98 +TY+ ++ Y +LLN+F++ P +R QYSS IF + E Sbjct 60 ITYNPKIVKYTDLLNLFWNNHDPTTPNRQGWDVGEQYSSHIFYFTE 105 >ref|YP_003533688.1| peptide-methionine (S)-S-oxide reductase [Haloferax volcanii DS2] gb|ADE02239.1| peptide-methionine (S)-S-oxide reductase [Haloferax volcanii DS2] Length=189 Score = 68.6 bits (166), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 42/106 (40%), Positives = 56/106 (53%), Gaps = 15/106 (14%) Query 1 ASFGMGCFWEPAESMLKVDGIIDTVSGYTGNKRFDDDKKKTVPSYENVCYGQD-WVEGVQ 59 A+FG GCFW + ++DGI + SGY G + + PSYE VC G E VQ Sbjct 7 ATFGGGCFWCVEAAFKELDGISEVTSGYAGGETEN-------PSYEQVCSGSTGHAEVVQ 59 Query 60 VTYDDSVISYGELLNVFFDKQKPAPQSR-------QYSSIIFPYDE 98 V YD +V+ Y ELL+VFF P +R QY SI+ +D+ Sbjct 60 VDYDPAVVGYDELLDVFFAVHDPTQLNRQGPDVGTQYRSIVLFHDD 105 >gb|ADI19511.1| peptide methionine sulfoxide reductase [uncultured Chloroflexi bacterium HF0770_09E03] Length=182 Score = 68.6 bits (166), Expect = 3e-13, Method: Compositional matrix adjust. Identities = 37/105 (35%), Positives = 54/105 (51%), Gaps = 15/105 (14%) Query 2 SFGMGCFWEPAESMLKVDGIIDTVSGYTGNKRFDDDKKKTVPSYENVCYGQD-WVEGVQV 60 + GCFW ++DG+++ ++GY G + PSYE VC G E Q+ Sbjct 17 TLAAGCFWCVEAVFERIDGVVNVIAGYAGGHLKN-------PSYEAVCSGNTGHAEVAQI 69 Query 61 TYDDSVISYGELLNVFFDKQKPAPQSR-------QYSSIIFPYDE 98 T+D + ISYGE+L+VF+ P +R QY S IF +DE Sbjct 70 TFDPTKISYGEILDVFWKAHDPTTLNRQGGDVGTQYRSAIFTHDE 114 >ref|YP_001329313.1| peptide methionine sulfoxide reductase [Methanococcus maripaludis C7] sp|A6VFD6.1|MSRA_METM7 RecName: Full=Peptide methionine sulfoxide reductase MsrA; Short=Protein-methionine-S-oxide reductase; AltName: Full=Peptide-methionine (S)-S-oxide reductase; Short=Peptide Met(O) reductase gb|ABR65162.1| peptide methionine sulfoxide reductase [Methanococcus maripaludis C7] Length=157 Score = 68.2 bits (165), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 40/102 (39%), Positives = 53/102 (52%), Gaps = 15/102 (15%) Query 1 ASFGMGCFWEPAESMLKVDGIIDTVSGYTGNKRFDDDKKKTVPSYENVCYGQD-WVEGVQ 59 A FGMGCFW E VDG+I T GY G + P+Y VC G+ +E V+ Sbjct 7 AVFGMGCFWSAEELFRHVDGVISTEVGYMGGNVKN-------PTYGQVCRGKSGHIEVVK 59 Query 60 VTYDDSVISYGELLNVFFDKQKPAPQSR-------QYSSIIF 94 V+YD +I+Y +LL +F+ P +R QYSS IF Sbjct 60 VSYDSKIITYDDLLELFWKNHDPTTPNRQGWDVGEQYSSHIF 101 >ref|YP_003542155.1| peptide methionine sulfoxide reductase [Methanohalophilus mahii DSM 5219] gb|ADE36510.1| peptide methionine sulfoxide reductase [Methanohalophilus mahii DSM 5219] Length=164 Score = 68.2 bits (165), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 38/105 (36%), Positives = 57/105 (54%), Gaps = 15/105 (14%) Query 1 ASFGMGCFWEPAESMLKVDGIIDTVSGYTGNKRFDDDKKKTVPSYENVCYGQD-WVEGVQ 59 A+F GCFW + +V+G+I T GYTG + PSY+ VC G+ E V+ Sbjct 9 ATFAAGCFWGVEAAFREVEGVISTQVGYTGGSMSN-------PSYKEVCTGRTGHAEAVE 61 Query 60 VTYDDSVISYGELLNVFFDKQKPAPQSR-------QYSSIIFPYD 97 VTYD ++SY ++L++F++ P +R QY S IF +D Sbjct 62 VTYDPQIVSYEQMLDIFWNIHDPTTPNRQGPDIGTQYRSAIFYHD 106 >ref|XP_002426843.1| EIP28, putative [Pediculus humanus corporis] gb|EEB14105.1| EIP28, putative [Pediculus humanus corporis] Length=217 Score = 68.9 bits (167), Expect = 4e-13, Method: Compositional matrix adjust. Identities = 40/98 (41%), Positives = 54/98 (55%), Gaps = 11/98 (11%) Query 1 ASFGMGCFWEPAESMLKVDGIIDTVSGYTGNKRFDDDKKKTVPSYENVCYGQDWVEGVQV 60 A+FGMGCFW G+I T G+TG K P Y+N+ D E V++ Sbjct 14 ATFGMGCFWGVESLFGATKGVIRTRVGFTGGN-------KDSPVYKNLG---DHTEAVEL 63 Query 61 TYDDSVISYGELLNVFFDKQKP-APQSRQYSSIIFPYD 97 YD +V+SY +LLN+F+ P A SRQY+S IF +D Sbjct 64 DYDPNVVSYEDLLNIFWSNHDPSARMSRQYASAIFYHD 101 >ref|YP_003707342.1| peptide methionine sulfoxide reductase [Methanococcus voltae A3] gb|ADI36369.1| peptide methionine sulfoxide reductase [Methanococcus voltae A3] Length=175 Score = 68.2 bits (165), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 41/102 (40%), Positives = 52/102 (51%), Gaps = 15/102 (15%) Query 1 ASFGMGCFWEPAESMLKVDGIIDTVSGYTGNKRFDDDKKKTVPSYENVCYGQD-WVEGVQ 59 A FGMGCFW E +V G++DT GY G K P+YE VC G VE V Sbjct 19 AIFGMGCFWGSEELFRRVKGVLDTEVGYMGG-------KTKYPTYEEVCGGNTGHVEVVT 71 Query 60 VTYDDSVISYGELLNVFFDKQKPAPQSR-------QYSSIIF 94 + YD +I Y ELL++F+ P +R QY+S IF Sbjct 72 IIYDIKMIDYEELLDIFWINHDPTTVNRQGWDVGEQYASTIF 113 >ref|YP_003146651.1| peptide methionine sulfoxide reductase [Kangiella koreensis DSM 16069] gb|ACV26883.1| peptide methionine sulfoxide reductase [Kangiella koreensis DSM 16069] Length=185 Score = 68.2 bits (165), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 40/105 (38%), Positives = 56/105 (53%), Gaps = 15/105 (14%) Query 1 ASFGMGCFWEPAESMLKVDGIIDTVSGYTGNKRFDDDKKKTVPSYENVCYG-QDWVEGVQ 59 A+F +GCFW + + DG++ T GY G+ F++ PSYE VC G E VQ Sbjct 21 ATFALGCFWGAEKLFWQQDGVVMTSVGYAGSD-FEN------PSYEQVCAGVTGHAEAVQ 73 Query 60 VTYDDSVISYGELLNVFFDKQKPAPQSR-------QYSSIIFPYD 97 + YD SVISY +LL +F++ P R QY S+I +D Sbjct 74 IIYDPSVISYQDLLQLFWENHDPTQGMRQGNDIGTQYRSVILAHD 118 >ref|NP_280075.1| methionine sulfoxide reductase A [Halobacterium sp. NRC-1] ref|YP_001689182.1| methionine sulfoxide reductase A [Halobacterium salinarum R1] sp|Q9HQG0.1|MSRA_HALSA RecName: Full=Peptide methionine sulfoxide reductase MsrA; Short=Protein-methionine-S-oxide reductase; AltName: Full=Peptide-methionine (S)-S-oxide reductase; Short=Peptide Met(O) reductase sp|B0R518.1|MSRA_HALS3 RecName: Full=Peptide methionine sulfoxide reductase MsrA; Short=Protein-methionine-S-oxide reductase; AltName: Full=Peptide-methionine (S)-S-oxide reductase; Short=Peptide Met(O) reductase gb|AAG19555.1| peptide methionine sulfoxide reductase [Halobacterium sp. NRC-1] emb|CAP13833.1| peptide-methionine (S)-S-oxide reductase [Halobacterium salinarum R1] Length=177 Score = 68.2 bits (165), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 39/106 (37%), Positives = 53/106 (50%), Gaps = 15/106 (14%) Query 1 ASFGMGCFWEPAESMLKVDGIIDTVSGYTGNKRFDDDKKKTVPSYENVCYGQD-WVEGVQ 59 A+ G GCFW +M ++ G+ D SGY G D PSY +VC G E VQ Sbjct 6 ATLGGGCFWCTEAAMEELAGVTDVTSGYAGGDTAD-------PSYRDVCSGTTGHAEVVQ 58 Query 60 VTYDDSVISYGELLNVFFDKQKPAPQSR-------QYSSIIFPYDE 98 V YD + ++Y ++L VFF P R QY SI+ P+D+ Sbjct 59 VEYDTAELAYEDVLEVFFTVHDPTTVDREGPDVGSQYRSIVLPHDD 104 >ref|YP_004847022.1| peptide methionine sulfoxide reductase [Pseudogulbenkiania sp. NH8B] dbj|BAK76608.1| peptide methionine sulfoxide reductase [Pseudogulbenkiania sp. NH8B] Length=181 Score = 68.2 bits (165), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 40/106 (38%), Positives = 54/106 (51%), Gaps = 15/106 (14%) Query 1 ASFGMGCFWEPAESMLKVDGIIDTVSGYTGNKRFDDDKKKTVPSYENVCYGQD-WVEGVQ 59 A+ GCFW + ++DG+ VSGYTG D PSY VC G E V+ Sbjct 4 ATLAGGCFWCTESAFRRLDGVHAVVSGYTGGHAPD-------PSYRAVCDGTTGHAEAVE 56 Query 60 VTYDDSVISYGELLNVFFDKQKPAPQSR-------QYSSIIFPYDE 98 +TYD +++SY +LL VFF P +R QY S IF +D+ Sbjct 57 ITYDPAILSYRDLLAVFFAIHDPTTPNRQGYDVGTQYRSAIFYHDD 102 >ref|YP_004742599.1| unnamed protein product [Methanococcus maripaludis X1] gb|AEK19856.1| peptide methionine sulfoxide reductase [Methanococcus maripaludis X1] Length=157 Score = 67.4 bits (163), Expect = 5e-13, Method: Compositional matrix adjust. Identities = 39/104 (38%), Positives = 56/104 (54%), Gaps = 15/104 (14%) Query 3 FGMGCFWEPAESMLKVDGIIDTVSGYTGNKRFDDDKKKTVPSYENVCYGQD-WVEGVQVT 61 FGMGCFW E KV G+I T G+ G + P+Y VC G+ +E V++ Sbjct 9 FGMGCFWGAEEVFRKVKGVISTEVGFMGGTIKN-------PTYGQVCRGKSGHIEVVKID 61 Query 62 YDDSVISYGELLNVFFDKQKPAPQSR-------QYSSIIFPYDE 98 YD +ISY ELL++F++ P ++ QYSS IF +D+ Sbjct 62 YDSEIISYDELLDLFWNNHNPTTPNKQGWDVGEQYSSYIFYFDD 105 >ref|NP_275678.1| unnamed protein product [Methanothermobacter thermautotrophicus str. Delta H] sp|O26635.1|MSRA_METTH RecName: Full=Peptide methionine sulfoxide reductase MsrA; Short=Protein-methionine-S-oxide reductase; AltName: Full=Peptide-methionine (S)-S-oxide reductase; Short=Peptide Met(O) reductase gb|AAB85041.1| peptide methionine sulfoxide reductase [Methanothermobacter thermautotrophicus str. Delta H] Length=169 Score = 67.8 bits (164), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 39/102 (38%), Positives = 55/102 (54%), Gaps = 15/102 (15%) Query 1 ASFGMGCFWEPAESMLKVDGIIDTVSGYTGNKRFDDDKKKTVPSYENVCYG-QDWVEGVQ 59 A+FG GCFW ++ KVDG++ T GY G + P+YE+VC G E V+ Sbjct 10 ATFGAGCFWGVEDAFRKVDGVVSTRVGYMGGHLEN-------PTYEDVCTGLTGHAEVVE 62 Query 60 VTYDDSVISYGELLNVFFDKQKPAPQSR-------QYSSIIF 94 VT+D V+ Y +LL+VF+ P +R QY S+IF Sbjct 63 VTFDPDVVGYSDLLDVFWSIHDPTTLNRQGPDVGEQYRSVIF 104 >ref|XP_002177204.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gb|EEC51667.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length=83 Score = 65.5 bits (158), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 31/80 (39%), Positives = 43/80 (54%), Gaps = 3/80 (4%) Query 1 ASFGMGCFWEPAESMLKVDGIIDTVSGYTGNKRFDDDKKKTVPSYENVCYGQDWVEGVQV 60 A FGMGCFW+P E+ L G++ +GY + + PSY VC G E V V Sbjct 1 ALFGMGCFWKPQEAFLATPGVLQATAGYANATQSTSVDQ---PSYLTVCNGDGHTEAVLV 57 Query 61 TYDDSVISYGELLNVFFDKQ 80 YD +V++Y +LL VF+ Sbjct 58 KYDPNVVAYCQLLRVFWQNH 77 >ref|NP_954202.1| methionine sulfoxide reductase A [Geobacter sulfurreducens PCA] sp|Q747V4.1|MSRA_GEOSL RecName: Full=Peptide methionine sulfoxide reductase MsrA; Short=Protein-methionine-S-oxide reductase; AltName: Full=Peptide-methionine (S)-S-oxide reductase; Short=Peptide Met(O) reductase gb|AAR36552.1| peptide methionine sulfoxide reductase [Geobacter sulfurreducens PCA] gb|ADI85912.1| peptide methionine sulfoxide reductase (S-isomer-specific) [Geobacter sulfurreducens KN400] Length=162 Score = 67.4 bits (163), Expect = 6e-13, Method: Compositional matrix adjust. Identities = 38/102 (37%), Positives = 53/102 (52%), Gaps = 15/102 (15%) Query 1 ASFGMGCFWEPAESMLKVDGIIDTVSGYTGNKRFDDDKKKTVPSYENVCYGQD-WVEGVQ 59 A+FG GCFW E +V G++ T++GY G K P+YE VC E V+ Sbjct 10 ATFGAGCFWHVEEEFRRVPGVVSTLAGYMGG-------WKEHPTYEEVCSKTTGHAEVVE 62 Query 60 VTYDDSVISYGELLNVFFDKQKPAPQSRQ-------YSSIIF 94 VT+D + ++Y LL VF+D P +RQ Y S+IF Sbjct 63 VTFDPAAVTYDHLLRVFWDCHDPTQLNRQGPDIGTNYRSVIF 104 >ref|YP_742147.1| peptide methionine sulfoxide reductase [Alkalilimnicola ehrlichii MLHE-1] gb|ABI56657.1| peptide methionine sulfoxide reductase [Alkalilimnicola ehrlichii MLHE-1] Length=184 Score = 67.8 bits (164), Expect = 8e-13, Method: Compositional matrix adjust. Identities = 41/106 (39%), Positives = 51/106 (48%), Gaps = 15/106 (14%) Query 1 ASFGMGCFWEPAESMLKVDGIIDTVSGYTGNKRFDDDKKKTVPSYENVCYGQD-WVEGVQ 59 A+ G GCFW ++ G+ VSGY G +R PSY VC G E VQ Sbjct 11 ATLGGGCFWCLEAVFQRLRGVRSVVSGYAGGRRAH-------PSYAQVCSGATGHAEVVQ 63 Query 60 VTYDDSVISYGELLNVFFDKQKPAPQSR-------QYSSIIFPYDE 98 + YD ISY ELL VFF P +R QY S+IF +D+ Sbjct 64 IEYDPGTISYRELLQVFFTIHDPTTPNRQGADVGSQYRSVIFYHDD 109 >ref|YP_001046995.1| peptide methionine sulfoxide reductase [Methanoculleus marisnigri JR1] sp|A3CUG3.1|MSRA_METMJ RecName: Full=Peptide methionine sulfoxide reductase MsrA; Short=Protein-methionine-S-oxide reductase; AltName: Full=Peptide-methionine (S)-S-oxide reductase; Short=Peptide Met(O) reductase gb|ABN57013.1| peptide methionine sulfoxide reductase [Methanoculleus marisnigri JR1] Length=164 Score = 67.0 bits (162), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 38/102 (37%), Positives = 53/102 (52%), Gaps = 15/102 (15%) Query 1 ASFGMGCFWEPAESMLKVDGIIDTVSGYTGNKRFDDDKKKTVPSYENVCYGQD-WVEGVQ 59 A+FG GCFW E+ +V G+++T G+ G + P+Y VC G+ E VQ Sbjct 10 ATFGAGCFWGVEEAFRRVPGVVETAVGFMGGTVEN-------PTYPEVCTGRTGHAEVVQ 62 Query 60 VTYDDSVISYGELLNVFFDKQKPAPQSR-------QYSSIIF 94 VTYD +SY LL+ F+D P +R QY S+IF Sbjct 63 VTYDPGTVSYRALLDTFWDAHDPTTPNRQGPDIGTQYRSVIF 104 >ref|YP_003891181.1| peptide methionine sulfoxide reductase [Sulfurimonas autotrophica DSM 16294] gb|ADN08169.1| peptide methionine sulfoxide reductase [Sulfurimonas autotrophica DSM 16294] Length=175 Score = 67.4 bits (163), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 41/104 (39%), Positives = 52/104 (50%), Gaps = 15/104 (14%) Query 3 FGMGCFWEPAESMLKVDGIIDTVSGYTGNKRFDDDKKKTVPSYENVCYGQD-WVEGVQVT 61 G GCFW V G+I VSGY G R + PSYENVC G E V +T Sbjct 8 LGGGCFWCIEAVYRNVKGVISAVSGYAGGARAN-------PSYENVCSGATGHAEIVDIT 60 Query 62 YDDSVISYGELLNVFFDKQKP-------APQSRQYSSIIFPYDE 98 YD VI+ E+L++FF+ P A + QY S+I+ DE Sbjct 61 YDVDVITLSEILDIFFEIHNPTTLNAQGADKGTQYRSVIYYADE 104 >ref|NP_001232951.1| uncharacterized protein LOC100164380 [Acyrthosiphon pisum] dbj|BAH71057.1| ACYPI005402 [Acyrthosiphon pisum] Length=231 Score = 68.2 bits (165), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 36/99 (36%), Positives = 54/99 (55%), Gaps = 10/99 (10%) Query 1 ASFGMGCFWEPAESMLKVDGIIDTVSGYTGNKRFDDDKKKTVPSYENVCYGQDWVEGVQV 60 A+F MGCFW P GII T GY G + +P+Y N+ D+ E +Q+ Sbjct 29 ATFSMGCFWAPDSLFGSTPGIITTRVGYAGGT------EGLIPTYRNIG---DYTEAIQL 79 Query 61 TYDDSVISYGELLNVFFDKQKPAPQ-SRQYSSIIFPYDE 98 YD + +SY ELL +F+D P + +QYSS I+ +++ Sbjct 80 QYDPNTVSYLELLKMFWDHHDPTAKFKKQYSSFIYYHND 118 >ref|YP_003572863.1| peptide methionine sulfoxide reductase MsrA [Salinibacter ruber M8] emb|CBH25911.1| Peptide methionine sulfoxide reductase msrA [Salinibacter ruber M8] Length=258 Score = 68.6 bits (166), Expect = 9e-13, Method: Compositional matrix adjust. Identities = 37/97 (38%), Positives = 51/97 (53%), Gaps = 12/97 (12%) Query 1 ASFGMGCFWEPAESMLKVDGIIDTVSGYTGNKRFDDDKKKTVPSYENVCYGQDWVEGVQV 60 A+FG+GCFW P +G++ T GY G P+YE++ D +E V+V Sbjct 57 AAFGLGCFWGPDALFGAQEGVVRTTVGYAGG-------GTPAPTYEDIG---DHIETVRV 106 Query 61 TYDDSVISYGELLNVFFDKQKP--APQSRQYSSIIFP 95 YD ISY +LL +F+ P AP RQY S +FP Sbjct 107 AYDPDQISYADLLALFWTAHDPTRAPLKRQYQSALFP 143 >emb|CBK87459.1| methionine-S-sulfoxide reductase [Enterobacter cloacae subsp. cloacae NCTC 9394] Length=171 Score = 67.0 bits (162), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 40/103 (39%), Positives = 52/103 (50%), Gaps = 15/103 (15%) Query 1 ASFGMGCFWEPAESMLKVDGIIDTVSGYTGNKRFDDDKKKTVPSYENVCYGQD-WVEGVQ 59 A F MGCFW ++ G+ T +GYTG + P+Y VC G+ E V+ Sbjct 4 ALFAMGCFWGVERLFWQLPGVYSTAAGYTGGYTPN-------PTYREVCSGETGHAEAVR 56 Query 60 VTYDDSVISYGELLNVFFDKQKPAPQSR-------QYSSIIFP 95 V YD SVISY +LL VF++ PA R QY S I+P Sbjct 57 VVYDPSVISYEQLLQVFWENHDPAQGMRQGNDHGTQYRSAIYP 99 >ref|YP_876251.1| peptide methionine sulfoxide reductase [Cenarchaeum symbiosum A] gb|ABK77947.1| peptide methionine sulfoxide reductase [Cenarchaeum symbiosum A] Length=150 Score = 66.6 bits (161), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 39/102 (38%), Positives = 52/102 (51%), Gaps = 15/102 (15%) Query 1 ASFGMGCFWEPAESMLKVDGIIDTVSGYTGNKRFDDDKKKTVPSYENVCY-GQDWVEGVQ 59 A+F GCFW E K++G+ DT GYTG + P+YE VC G E VQ Sbjct 3 ATFAAGCFWHVEEIFRKIEGVQDTAVGYTGGVPEN-------PTYEQVCTDGTGHAEAVQ 55 Query 60 VTYDDSVISYGELLNVFFDKQKPAPQSR-------QYSSIIF 94 V YD ++Y +LL+VF+ P ++R QY S IF Sbjct 56 VEYDPDRVTYEKLLDVFWGNHDPTTRNRQGPDVGTQYRSAIF 97 >ref|YP_004941754.1| unnamed protein product [Flavobacterium columnare ATCC 49512] gb|AEW85961.1| peptide methionine sulfoxide reductase msrA [Flavobacterium columnare ATCC 49512] Length=179 Score = 67.0 bits (162), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 40/106 (38%), Positives = 55/106 (52%), Gaps = 15/106 (14%) Query 1 ASFGMGCFWEPAESMLKVDGIIDTVSGYTGNKRFDDDKKKTVPSYENVCYG-QDWVEGVQ 59 A+FG GCFW + ++ G+ VSGYTG K + P+Y+ VC G D E +Q Sbjct 7 ATFGGGCFWCIEAIVQRLKGVERVVSGYTGGKTKN-------PTYKEVCNGDTDHAEVIQ 59 Query 60 VTYDDSVISYGELLNVFFDKQKP-------APQSRQYSSIIFPYDE 98 VT++ +SY ELL VF P A QY S+IF ++E Sbjct 60 VTFNTLFLSYAELLGVFMTNHNPTTLNYQGADYGTQYRSVIFYHNE 105 >ref|YP_004836420.1| peptide methionine sulfoxide reductase MsrA [Sphingobium sp. SYK-6] dbj|BAK67963.1| peptide methionine sulfoxide reductase MsrA [Sphingobium sp. SYK-6] Length=176 Score = 67.0 bits (162), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 39/105 (37%), Positives = 52/105 (50%), Gaps = 15/105 (14%) Query 1 ASFGMGCFWEPAESMLKVDGIIDTVSGYTGNKRFDDDKKKTVPSYENVCYGQD-WVEGVQ 59 A+ GCFW + G+ SGY G K P+YE VC GQ E ++ Sbjct 5 ATLAGGCFWCTEAVYQSLAGVEAVESGYIGGT-------KPNPTYEEVCTGQTGHAEAIR 57 Query 60 VTYDDSVISYGELLNVFFDKQKPAPQSR-------QYSSIIFPYD 97 +TYD + ISYG+LL++FF P +R QY S IFP+D Sbjct 58 ITYDPATISYGDLLDIFFATHDPTTLNRQGNDVGTQYRSAIFPHD 102 >ref|NP_987968.1| peptide methionine sulfoxide reductase [Methanococcus maripaludis S2] sp|Q6LYY1.1|MSRA_METMP RecName: Full=Peptide methionine sulfoxide reductase MsrA; Short=Protein-methionine-S-oxide reductase; AltName: Full=Peptide-methionine (S)-S-oxide reductase; Short=Peptide Met(O) reductase emb|CAF30404.1| protein methionine-S-oxide reductase [Methanococcus maripaludis S2] Length=157 Score = 66.6 bits (161), Expect = 1e-12, Method: Compositional matrix adjust. Identities = 37/104 (36%), Positives = 57/104 (55%), Gaps = 15/104 (14%) Query 3 FGMGCFWEPAESMLKVDGIIDTVSGYTGNKRFDDDKKKTVPSYENVCYGQD-WVEGVQVT 61 FGMGCFW E K++G++ T G+ G + P+Y VC G+ +E V++ Sbjct 9 FGMGCFWGAEEVFRKINGVVSTEVGFMGGTIKN-------PTYGQVCRGKSGHIEVVKID 61 Query 62 YDDSVISYGELLNVFFDKQKPAPQSR-------QYSSIIFPYDE 98 YD +ISY ELL++F++ P ++ QYSS IF +D+ Sbjct 62 YDPEIISYDELLDLFWNNHNPTTPNKQGWDVGEQYSSYIFYFDD 105 >ref|YP_004950282.1| msrA gene product [Enterobacter cloacae EcWSU1] gb|AEW71861.1| Peptide methionine sulfoxide reductase msrA [Enterobacter cloacae EcWSU1] Length=213 Score = 67.4 bits (163), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 40/103 (39%), Positives = 52/103 (50%), Gaps = 15/103 (15%) Query 1 ASFGMGCFWEPAESMLKVDGIIDTVSGYTGNKRFDDDKKKTVPSYENVCYGQD-WVEGVQ 59 A F MGCFW K+ G+ T +GYTG + P+Y VC G+ E V+ Sbjct 46 ALFAMGCFWGVERLFWKLPGVYSTAAGYTGGYTPN-------PTYREVCSGETGHAEAVR 98 Query 60 VTYDDSVISYGELLNVFFDKQKPAPQSR-------QYSSIIFP 95 V YD +VISY +LL VF++ PA R QY S I+P Sbjct 99 VVYDPAVISYEQLLQVFWENHDPAQGMRQGNDHGTQYRSAIYP 141 >ref|YP_687309.1| methionine sulfoxide reductase A [uncultured methanogenic archaeon RC-I] emb|CAJ37983.1| peptide methionine sulfoxide reductase, domain A [uncultured methanogenic archaeon RC-I] Length=163 Score = 66.2 bits (160), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 39/105 (37%), Positives = 56/105 (53%), Gaps = 15/105 (14%) Query 1 ASFGMGCFWEPAESMLKVDGIIDTVSGYTGNKRFDDDKKKTVPSYENVCYGQD-WVEGVQ 59 A+FG GCFW ++ LK G+I T SG+ G + P+YE VC G+ E V+ Sbjct 13 ATFGAGCFWHVEDAFLKEPGVISTQSGFMGGTTEN-------PTYEEVCTGRTGHTEVVE 65 Query 60 VTYDDSVISYGELLNVFFDKQKPAPQSR-------QYSSIIFPYD 97 VTYD ++Y LL+VF+ P +R QY S+IF ++ Sbjct 66 VTYDPDKVTYDRLLDVFWSIHDPTQVNRQGPDIGVQYRSVIFYHN 110 >ref|YP_002467288.1| peptide methionine sulfoxide reductase [Methanosphaerula palustris E1-9c] gb|ACL17565.1| peptide methionine sulfoxide reductase [Methanosphaerula palustris E1-9c] Length=165 Score = 66.2 bits (160), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 38/102 (37%), Positives = 51/102 (50%), Gaps = 15/102 (15%) Query 1 ASFGMGCFWEPAESMLKVDGIIDTVSGYTGNKRFDDDKKKTVPSYENVCYGQD-WVEGVQ 59 A+FG GCFW E+ + G+ T +GY G D P+YE VC G+ E VQ Sbjct 13 ATFGGGCFWGVEEAFRTIRGVTKTTAGYMGGTTPD-------PTYEMVCTGRTGHAEVVQ 65 Query 60 VTYDDSVISYGELLNVFFDKQKPAPQSR-------QYSSIIF 94 V +D ++I Y LL +FF P +R QY S+IF Sbjct 66 VEFDPNLIEYQALLAIFFSHHDPTSLNRQGPDVGEQYRSVIF 107 >ref|ZP_03086295.1| methionine sulfoxide reductase A [Escherichia coli O157:H7 str. EC4024] Length=199 Score = 67.0 bits (162), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 40/103 (39%), Positives = 52/103 (50%), Gaps = 15/103 (15%) Query 1 ASFGMGCFWEPAESMLKVDGIIDTVSGYTGNKRFDDDKKKTVPSYENVCYGQD-WVEGVQ 59 A F MGCFW ++ G+ T +GYTG + P+Y VC G+ E V+ Sbjct 32 ALFAMGCFWGVERLFWQLPGVYSTAAGYTGGYTPN-------PTYREVCSGETGHAEAVR 84 Query 60 VTYDDSVISYGELLNVFFDKQKPAPQSR-------QYSSIIFP 95 V YD SVISY +LL VF++ PA R QY S I+P Sbjct 85 VVYDPSVISYEQLLQVFWENHDPAQGMRQGNDHGTQYRSAIYP 127 >gb|ADO77343.1| methionine-R-sulfoxide reductase [Halanaerobium praevalens DSM 2228] Length=398 Score = 68.6 bits (166), Expect = 2e-12, Method: Composition-based stats. Identities = 37/100 (37%), Positives = 60/100 (60%), Gaps = 12/100 (12%) Query 1 ASFGMGCFWEPAESMLKVDGIIDTVSGYTGNKRFDDDKKKTVPSYENVCYGQDWVEGVQV 60 ASF +GCFW P ++G++ T GY G ++ D P Y+N+ +D E +++ Sbjct 40 ASFALGCFWGPDAYFGALEGVVRTRVGYAGGQKND-------PIYKNI---KDHTETIEI 89 Query 61 TYDDSVISYGELLNVFFDKQKP-APQ-SRQYSSIIFPYDE 98 Y+ +VISY ELL +FF + P +P SRQY+S+I +++ Sbjct 90 DYNPAVISYQELLEIFFKQHNPYSPALSRQYASLILYHNQ 129 >ref|YP_003611138.1| methionine sulfoxide reductase A [Enterobacter cloacae subsp. cloacae ATCC 13047] gb|ADF60189.1| methionine sulfoxide reductase A [Enterobacter cloacae subsp. cloacae ATCC 13047] Length=178 Score = 66.2 bits (160), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 40/103 (39%), Positives = 52/103 (50%), Gaps = 15/103 (15%) Query 1 ASFGMGCFWEPAESMLKVDGIIDTVSGYTGNKRFDDDKKKTVPSYENVCYGQD-WVEGVQ 59 A F MGCFW ++ G+ T +GYTG + P+Y VC G+ E V+ Sbjct 11 ALFAMGCFWGVERLYWQLPGVYSTAAGYTGGYTPN-------PTYREVCSGETGHAEAVR 63 Query 60 VTYDDSVISYGELLNVFFDKQKPAPQSR-------QYSSIIFP 95 V YD SVISY +LL VF++ PA R QY S I+P Sbjct 64 VVYDPSVISYEQLLQVFWENHDPAQGMRQGNDHGTQYRSAIYP 106 >ref|YP_566932.1| peptide methionine sulfoxide reductase [Methanococcoides burtonii DSM 6242] sp|Q12TP4.1|MSRA_METBU RecName: Full=Peptide methionine sulfoxide reductase MsrA; Short=Protein-methionine-S-oxide reductase; AltName: Full=Peptide-methionine (S)-S-oxide reductase; Short=Peptide Met(O) reductase gb|ABE53182.1| Peptide methionine-S-sulfoxide reductase [Methanococcoides burtonii DSM 6242] Length=153 Score = 65.9 bits (159), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 38/106 (36%), Positives = 55/106 (52%), Gaps = 15/106 (14%) Query 1 ASFGMGCFWEPAESMLKVDGIIDTVSGYTGNKRFDDDKKKTVPSYENVCYGQD-WVEGVQ 59 A+F GCFW + KV+G+I T GYTG D P+Y++V G E + Sbjct 4 ATFAAGCFWGVEAAFSKVEGVISTKVGYTGGTLKD-------PTYKDVSTGSTGHAESID 56 Query 60 VTYDDSVISYGELLNVFFDKQKPAPQ-------SRQYSSIIFPYDE 98 + +D+SVI+YGELL V ++ P + QY S IF +D+ Sbjct 57 IIFDESVITYGELLEVLWNTHDPTTKDSQGPDHGSQYRSAIFYHDD 102 >ref|ZP_08497746.1| methionine-S-sulfoxide reductase [Enterobacter hormaechei ATCC 49162] gb|EGK61315.1| methionine-S-sulfoxide reductase [Enterobacter hormaechei ATCC 49162] Length=213 Score = 67.0 bits (162), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 40/103 (39%), Positives = 52/103 (50%), Gaps = 15/103 (15%) Query 1 ASFGMGCFWEPAESMLKVDGIIDTVSGYTGNKRFDDDKKKTVPSYENVCYGQD-WVEGVQ 59 A F MGCFW ++ G+ T +GYTG + P+Y VC G+ E V+ Sbjct 46 ALFAMGCFWGVERLFWQLPGVYSTAAGYTGGYTPN-------PTYREVCSGETGHAEAVR 98 Query 60 VTYDDSVISYGELLNVFFDKQKPAPQSR-------QYSSIIFP 95 V YD SVISY +LL VF++ PA R QY S I+P Sbjct 99 VVYDPSVISYEQLLQVFWENHDPAQGMRQGNDHGTQYRSAIYP 141 >ref|XP_002502513.1| predicted protein [Micromonas sp. RCC299] gb|ACO63771.1| predicted protein [Micromonas sp. RCC299] Length=182 Score = 66.2 bits (160), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 34/89 (38%), Positives = 50/89 (56%), Gaps = 8/89 (9%) Query 11 PAESMLKVDGIIDTVSGYTGNKRFDDDKKKTVPSYENVCYGQDWVEGVQVTYDDSVISYG 70 P E+ V G++ T GYTG R D P+Y +VC G E V++ +D +V+SY Sbjct 1 PEETFSSVPGVVKTRVGYTGGDRAD-------PTYASVCAGDGHTEAVKIDFDPTVVSYA 53 Query 71 ELLNVFFDKQKP-APQSRQYSSIIFPYDE 98 +LL++F + P P S QY S ++P DE Sbjct 54 KLLDLFMAQHDPCVPMSAQYQSAVWPQDE 82 >ref|YP_002261961.1| peptide methionine sulfoxide reductase MSRA [Aliivibrio salmonicida LFI1238] emb|CAQ78117.1| peptide methionine sulfoxide reductase MSRA [Aliivibrio salmonicida LFI1238] Length=216 Score = 67.0 bits (162), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 38/104 (37%), Positives = 55/104 (53%), Gaps = 15/104 (14%) Query 3 FGMGCFWEPAESMLKVDGIIDTVSGYTGNKRFDDDKKKTVPSYENVCYGQ-DWVEGVQVT 61 FGMGCFW K+ G+ T GY+G K +P+Y++VC G D VE V+V Sbjct 55 FGMGCFWGTERLFWKLTGVYSTAVGYSGG-------KTKIPTYKDVCSGSTDHVEVVKVV 107 Query 62 YDDSVISYGELLNVFFDKQKPAPQSR-------QYSSIIFPYDE 98 ++ ++IS ELL+ F+ P R QY S+I+ YD+ Sbjct 108 FNPALISLEELLHSFWQTHNPTQGMRQGNDIGTQYRSVIYTYDK 151 >ref|YP_136589.1| methionine sulfoxide reductase A [Haloarcula marismortui ATCC 43049] gb|AAV46883.1| peptide methionine sulfoxide reductase MsrA [Haloarcula marismortui ATCC 43049] Length=177 Score = 66.2 bits (160), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 40/106 (38%), Positives = 52/106 (49%), Gaps = 15/106 (14%) Query 1 ASFGMGCFWEPAESMLKVDGIIDTVSGYTGNKRFDDDKKKTVPSYENVCYGQD-WVEGVQ 59 A+F GCFW +++G+ D VSGY G D PSYE VC + E VQ Sbjct 6 ATFAGGCFWCTESVFKQINGVTDVVSGYAGGHVAD-------PSYEAVCREETGHAECVQ 58 Query 60 VTYDDSVISYGELLNVFFDKQKPAPQSR-------QYSSIIFPYDE 98 +TYD +SY +LL V F P + R QY S +F +DE Sbjct 59 LTYDPEEVSYEDLLAVHFTTHTPTTKDREGNDVGTQYRSAVFYHDE 104 >ref|ZP_08668191.1| Peptide methionine sulfoxide reductase [Candidatus Nitrosoarchaeum koreensis MY1] gb|EGP93923.1| Peptide methionine sulfoxide reductase [Candidatus Nitrosoarchaeum koreensis MY1] Length=151 Score = 65.9 bits (159), Expect = 2e-12, Method: Compositional matrix adjust. Identities = 41/106 (39%), Positives = 53/106 (50%), Gaps = 15/106 (14%) Query 1 ASFGMGCFWEPAESMLKVDGIIDTVSGYTGNKRFDDDKKKTVPSYENVCYGQD-WVEGVQ 59 A+FG GCFW + + K GI T GY G K + P+YE VC + E VQ Sbjct 3 ATFGAGCFWHVEDLLRKTKGIKSTQVGYIGGKLPN-------PTYEEVCTDRTGHAEAVQ 55 Query 60 VTYDDSVISYGELLNVFFDKQKPAPQSR-------QYSSIIFPYDE 98 V YD + I+Y ELL VF+ P +R QY S IF ++E Sbjct 56 VEYDPNEITYDELLKVFWSNHDPTTLNRQGPDIGHQYRSAIFFHNE 101 >ref|YP_003737411.1| methionine sulfoxide reductase A [Halalkalicoccus jeotgali B3] gb|ADJ15619.1| methionine sulfoxide reductase A [Halalkalicoccus jeotgali B3] Length=179 Score = 66.2 bits (160), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 40/106 (38%), Positives = 54/106 (51%), Gaps = 15/106 (14%) Query 1 ASFGMGCFWEPAESMLKVDGIIDTVSGYTGNKRFDDDKKKTVPSYENVCYGQD-WVEGVQ 59 A+ GCFW ++DG++D SGY G + P+YE VC G+ E V+ Sbjct 6 ATVAGGCFWCIEAVFEELDGVVDVTSGYCGGHVEE-------PTYEAVCSGETGHAEAVR 58 Query 60 VTYDDSVISYGELLNVFFDKQKPAPQSR-------QYSSIIFPYDE 98 +TYDD +SY +LL VFF P +R QY S IF +DE Sbjct 59 LTYDDDRLSYPKLLEVFFTVHDPTTLNRQGPDVGSQYRSAIFYHDE 104 >ref|YP_002240824.1| methionine sulfoxide reductase A [Klebsiella pneumoniae 342] ref|YP_003441538.1| peptide methionine sulfoxide reductase [Klebsiella variicola At-22] ref|ZP_06551585.1| peptide-methionine (S)-S-oxide reductase [Klebsiella sp. 1_1_55] sp|B5Y2Y3.1|MSRA_KLEP3 RecName: Full=Peptide methionine sulfoxide reductase MsrA; Short=Protein-methionine-S-oxide reductase; AltName: Full=Peptide-methionine (S)-S-oxide reductase; Short=Peptide Met(O) reductase gb|ACI06650.1| methionine-S-sulfoxide reductase [Klebsiella pneumoniae 342] gb|ADC60506.1| peptide methionine sulfoxide reductase [Klebsiella variicola At-22] gb|EFD83214.1| peptide-methionine (S)-S-oxide reductase [Klebsiella sp. 1_1_55] Length=211 Score = 66.6 bits (161), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 40/103 (39%), Positives = 51/103 (50%), Gaps = 15/103 (15%) Query 1 ASFGMGCFWEPAESMLKVDGIIDTVSGYTGNKRFDDDKKKTVPSYENVCYGQD-WVEGVQ 59 A F MGCFW ++ G+ T +GYTG + P+Y VC GQ E V+ Sbjct 46 ALFAMGCFWGVERLFWQLPGVYSTAAGYTGGYTPN-------PTYREVCSGQTGHAEAVR 98 Query 60 VTYDDSVISYGELLNVFFDKQKPAPQSR-------QYSSIIFP 95 V YD VISY +LL VF++ PA R QY S I+P Sbjct 99 VVYDPQVISYEQLLQVFWENHDPAQGMRQGNDHGTQYRSAIYP 141 >ref|ZP_09347971.1| peptide methionine sulfoxide reductase msrA [Klebsiella sp. 4_1_44FAA] gb|AEJ96151.1| methionine sulfoxide reductase A [Klebsiella pneumoniae KCTC 2242] gb|EHL89566.1| peptide methionine sulfoxide reductase msrA [Klebsiella sp. 4_1_44FAA] gb|AEW59155.1| methionine sulfoxide reductase A [Klebsiella pneumoniae subsp. pneumoniae HS11286] Length=212 Score = 66.6 bits (161), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 40/103 (39%), Positives = 51/103 (50%), Gaps = 15/103 (15%) Query 1 ASFGMGCFWEPAESMLKVDGIIDTVSGYTGNKRFDDDKKKTVPSYENVCYGQD-WVEGVQ 59 A F MGCFW ++ G+ T +GYTG + P+Y VC GQ E V+ Sbjct 46 ALFAMGCFWGVERLFWQLPGVYSTAAGYTGGYTPN-------PTYREVCSGQTGHAEAVR 98 Query 60 VTYDDSVISYGELLNVFFDKQKPAPQSR-------QYSSIIFP 95 V YD VISY +LL VF++ PA R QY S I+P Sbjct 99 VVYDPQVISYEQLLQVFWENHDPAQGMRQGNDHGTQYRSAIYP 141 >ref|YP_004274540.1| unnamed protein product [Pedobacter saltans DSM 12145] gb|ADY52718.1| peptide methionine sulfoxide reductase [Pedobacter saltans DSM 12145] Length=183 Score = 66.2 bits (160), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 39/106 (37%), Positives = 53/106 (50%), Gaps = 15/106 (14%) Query 1 ASFGMGCFWEPAESMLKVDGIIDTVSGYTGNKRFDDDKKKTVPSYENVCYGQD-WVEGVQ 59 A FG GCFW + G+ID GY G + P+Y++VC G+ E +Q Sbjct 8 AVFGGGCFWCTEVIFTTLKGVIDVKPGYMGGSTEN-------PTYKDVCTGETGHAEVIQ 60 Query 60 VTYDDSVISYGELLNVFFDKQKPAPQSR-------QYSSIIFPYDE 98 + YD+ IS+ ELL VFF P +R QY S++F YDE Sbjct 61 IVYDEKQISFSELLLVFFKTHDPTTLNRQGNDIGTQYRSVVFYYDE 106 >ref|YP_001436362.1| methionine sulfoxide reductase A [Cronobacter sakazakii ATCC BAA-894] sp|A7MM56.1|MSRA_ENTS8 RecName: Full=Peptide methionine sulfoxide reductase MsrA; Short=Protein-methionine-S-oxide reductase; AltName: Full=Peptide-methionine (S)-S-oxide reductase; Short=Peptide Met(O) reductase gb|ABU75526.1| hypothetical protein ESA_00225 [Cronobacter sakazakii ATCC BAA-894] Length=212 Score = 66.6 bits (161), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 40/103 (39%), Positives = 51/103 (50%), Gaps = 15/103 (15%) Query 1 ASFGMGCFWEPAESMLKVDGIIDTVSGYTGNKRFDDDKKKTVPSYENVCYGQD-WVEGVQ 59 A F MGCFW + G+ T +GYTG + P+Y VC GQ E V+ Sbjct 46 ALFAMGCFWGVERLFWALPGVYSTAAGYTGGYTPN-------PTYREVCSGQTGHAEAVR 98 Query 60 VTYDDSVISYGELLNVFFDKQKPAPQSR-------QYSSIIFP 95 V YD +VISY +LL VF++ PA R QY S I+P Sbjct 99 VVYDPNVISYEQLLQVFWENHDPAQGMRQGNDVGTQYRSAIYP 141 >ref|YP_445204.1| methionine-S-sulfoxide reductase [Salinibacter ruber DSM 13855] gb|ABC44557.1| methionine-S-sulfoxide reductase [Salinibacter ruber DSM 13855] Length=218 Score = 66.6 bits (161), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 41/106 (39%), Positives = 53/106 (50%), Gaps = 15/106 (14%) Query 1 ASFGMGCFWEPAESMLKVDGIIDTVSGYTGNKRFDDDKKKTVPSYENVCYGQD-WVEGVQ 59 A+ G GCFW +VDG+ + VSGY G PSY VC G E VQ Sbjct 39 ATLGGGCFWCLEAVYEEVDGVTEIVSGYAGGH-------VQAPSYRQVCSGTTGHAEVVQ 91 Query 60 VTYDDSVISYGELLNVFFDKQKPAPQSR-------QYSSIIFPYDE 98 +TYD SVI+Y +LL +FF P + + QY SII +D+ Sbjct 92 LTYDPSVIAYRDLLEIFFTIHNPTTKDQEGADVGPQYRSIILHHDD 137 >ref|YP_001582329.1| peptide methionine sulfoxide reductase [Nitrosopumilus maritimus SCM1] gb|ABX12891.1| peptide methionine sulfoxide reductase [Nitrosopumilus maritimus SCM1] Length=150 Score = 65.5 bits (158), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 40/106 (38%), Positives = 54/106 (51%), Gaps = 15/106 (14%) Query 1 ASFGMGCFWEPAESMLKVDGIIDTVSGYTGNKRFDDDKKKTVPSYENVCYGQD-WVEGVQ 59 A+FG GCFW + + K G+ T GY G + P+YE VC + E V+ Sbjct 3 ATFGAGCFWHVEDLLSKTKGVKSTQVGYIGGNLPN-------PTYEEVCTDRTGHAEAVE 55 Query 60 VTYDDSVISYGELLNVFFDKQKPAPQSR-------QYSSIIFPYDE 98 V YD + ISY ELL+VF++ P +R QY S IF +DE Sbjct 56 VEYDPNEISYEELLDVFWNNHNPTTLNRQGPDVGIQYRSAIFYHDE 101 >ref|ZP_03698474.1| peptide methionine sulfoxide reductase [Lutiella nitroferrum 2002] gb|EEG08468.1| peptide methionine sulfoxide reductase [Lutiella nitroferrum 2002] Length=181 Score = 65.9 bits (159), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 39/106 (37%), Positives = 53/106 (50%), Gaps = 15/106 (14%) Query 1 ASFGMGCFWEPAESMLKVDGIIDTVSGYTGNKRFDDDKKKTVPSYENVCYGQD-WVEGVQ 59 A+ GCFW + ++DG+ VSGY G D PSY VC G E V+ Sbjct 4 ATLAGGCFWCTESAFRRLDGVHAVVSGYIGGHAPD-------PSYREVCDGTTGHAEAVE 56 Query 60 VTYDDSVISYGELLNVFFDKQKPAPQSR-------QYSSIIFPYDE 98 +TYD +++SY +LL VFF P +R QY S IF +D+ Sbjct 57 ITYDPAILSYRDLLAVFFAIHDPTTPNRQGYDVGTQYRSAIFYHDD 102 >ref|ZP_06067426.1| peptide-methionine (S)-S-oxide reductase [Acinetobacter junii SH205] gb|EEY92247.1| peptide-methionine (S)-S-oxide reductase [Acinetobacter junii SH205] Length=174 Score = 65.9 bits (159), Expect = 3e-12, Method: Compositional matrix adjust. Identities = 40/106 (38%), Positives = 54/106 (51%), Gaps = 15/106 (14%) Query 1 ASFGMGCFWEPAESMLKVDGIIDTVSGYTGNKRFDDDKKKTVPSYENVCYG-QDWVEGVQ 59 A FG GCFW L++ G+ VSGY G + PSYE VC G E VQ Sbjct 4 ALFGGGCFWCVEAVFLQLKGVEKVVSGYAGGHIAN-------PSYEQVCQGDTQHAEVVQ 56 Query 60 VTYDDSVISYGELLNVFFDKQKPAPQSR-------QYSSIIFPYDE 98 + +D+ ISY +LLNVFF P +R QY S+I+ +++ Sbjct 57 IDFDEQQISYSDLLNVFFATHDPTTLNRQGNDIGTQYRSVIYYFND 102 >gb|EGL71968.1| methionine sulfoxide reductase A [Cronobacter sakazakii E899] Length=212 Score = 66.2 bits (160), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 40/103 (39%), Positives = 50/103 (49%), Gaps = 15/103 (15%) Query 1 ASFGMGCFWEPAESMLKVDGIIDTVSGYTGNKRFDDDKKKTVPSYENVCYGQD-WVEGVQ 59 A F MGCFW + G+ T +GYTG + P+Y VC GQ E V+ Sbjct 46 ALFAMGCFWGVERLFWALPGVYSTAAGYTGGYTPN-------PTYREVCSGQTGHAEAVR 98 Query 60 VTYDDSVISYGELLNVFFDKQKPAPQSR-------QYSSIIFP 95 V YD VISY +LL VF++ PA R QY S I+P Sbjct 99 VVYDPKVISYEQLLQVFWENHDPAQGMRQGNDVGTQYRSAIYP 141 >ref|YP_003571145.1| peptide methionine sulfoxide reductase MsrA [Salinibacter ruber M8] emb|CBH24193.1| Peptide methionine sulfoxide reductase msrA [Salinibacter ruber M8] Length=228 Score = 66.6 bits (161), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 41/106 (39%), Positives = 53/106 (50%), Gaps = 15/106 (14%) Query 1 ASFGMGCFWEPAESMLKVDGIIDTVSGYTGNKRFDDDKKKTVPSYENVCYGQD-WVEGVQ 59 A+ G GCFW +VDG+ + VSGY G PSY VC G E VQ Sbjct 49 ATLGGGCFWCLEAVYEEVDGVTEIVSGYAGGH-------VQAPSYRQVCSGTTGHAEVVQ 101 Query 60 VTYDDSVISYGELLNVFFDKQKPAPQSR-------QYSSIIFPYDE 98 +TYD SVI+Y +LL +FF P + + QY SII +D+ Sbjct 102 LTYDPSVIAYRDLLEIFFTIHNPTTKDQEGADVGPQYRSIILHHDD 147 >ref|YP_004059011.1| peptide methionine sulfoxide reductase [Sulfuricurvum kujiense DSM 16994] gb|ADR32811.1| peptide methionine sulfoxide reductase [Sulfuricurvum kujiense DSM 16994] Length=178 Score = 65.9 bits (159), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 42/106 (40%), Positives = 53/106 (50%), Gaps = 15/106 (14%) Query 1 ASFGMGCFWEPAESMLKVDGIIDTVSGYTGNKRFDDDKKKTVPSYENVCYGQD-WVEGVQ 59 A G GCFW +V G+ +SGY G R PSYE VC G E V+ Sbjct 7 ALIGGGCFWCIEAVYNRVIGVQSAISGYAGGARKH-------PSYEQVCSGATGHAEVVE 59 Query 60 VTYDDSVISYGELLNVFFDKQKP-------APQSRQYSSIIFPYDE 98 VTYD +VISY E+L +F+ P A + QY S+I+ YDE Sbjct 60 VTYDSAVISYEEILEIFWAIHDPTTLNAQGADRGTQYRSVIYYYDE 105 >ref|YP_004826973.1| peptide methionine sulfoxide reductase MsrA [Enterobacter asburiae LF7a] gb|AEN63188.1| Peptide methionine sulfoxide reductase msrA [Enterobacter asburiae LF7a] Length=213 Score = 66.2 bits (160), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 39/103 (38%), Positives = 52/103 (50%), Gaps = 15/103 (15%) Query 1 ASFGMGCFWEPAESMLKVDGIIDTVSGYTGNKRFDDDKKKTVPSYENVCYGQD-WVEGVQ 59 A F MGCFW ++ G+ T +GYTG + P+Y VC G+ E V+ Sbjct 46 ALFAMGCFWGVERLFWQLPGVYSTAAGYTGGYTPN-------PTYREVCSGETGHAEAVR 98 Query 60 VTYDDSVISYGELLNVFFDKQKPAPQSR-------QYSSIIFP 95 V YD S+ISY +LL VF++ PA R QY S I+P Sbjct 99 VVYDPSIISYEQLLQVFWENHDPAQGMRQGNDHGTQYRSAIYP 141 >ref|YP_001338233.1| msrA gene product [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] ref|ZP_06018378.1| methionine-S-sulfoxide reductase [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] ref|ZP_08304630.1| peptide-methionine (S)-S-oxide reductase [Klebsiella sp. MS 92-3] gb|ABR79966.1| methionine sulfoxide reductase A [Klebsiella pneumoniae subsp. pneumoniae MGH 78578] gb|EEW38519.1| methionine-S-sulfoxide reductase [Klebsiella pneumoniae subsp. rhinoscleromatis ATCC 13884] gb|EGF63253.1| peptide-methionine (S)-S-oxide reductase [Klebsiella sp. MS 92-3] Length=232 Score = 66.6 bits (161), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 40/103 (39%), Positives = 51/103 (50%), Gaps = 15/103 (15%) Query 1 ASFGMGCFWEPAESMLKVDGIIDTVSGYTGNKRFDDDKKKTVPSYENVCYGQD-WVEGVQ 59 A F MGCFW ++ G+ T +GYTG + P+Y VC GQ E V+ Sbjct 66 ALFAMGCFWGVERLFWQLPGVYSTAAGYTGGYTPN-------PTYREVCSGQTGHAEAVR 118 Query 60 VTYDDSVISYGELLNVFFDKQKPAPQSR-------QYSSIIFP 95 V YD VISY +LL VF++ PA R QY S I+P Sbjct 119 VVYDPQVISYEQLLQVFWENHDPAQGMRQGNDHGTQYRSAIYP 161 >ref|YP_002917432.1| methionine sulfoxide reductase A [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] dbj|BAH61365.1| methionine sulfoxide reductase A [Klebsiella pneumoniae subsp. pneumoniae NTUH-K2044] Length=232 Score = 66.6 bits (161), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 40/103 (39%), Positives = 51/103 (50%), Gaps = 15/103 (15%) Query 1 ASFGMGCFWEPAESMLKVDGIIDTVSGYTGNKRFDDDKKKTVPSYENVCYGQD-WVEGVQ 59 A F MGCFW ++ G+ T +GYTG + P+Y VC GQ E V+ Sbjct 66 ALFAMGCFWGVERLFWQLPGVYSTAAGYTGGYTPN-------PTYREVCSGQTGHAEAVR 118 Query 60 VTYDDSVISYGELLNVFFDKQKPAPQSR-------QYSSIIFP 95 V YD VISY +LL VF++ PA R QY S I+P Sbjct 119 VVYDPQVISYEQLLQVFWENHDPAQGMRQGNDHGTQYRSAIYP 161 >ref|XP_001767588.1| predicted protein [Physcomitrella patens subsp. patens] gb|EDQ67547.1| predicted protein [Physcomitrella patens subsp. patens] Length=168 Score = 65.5 bits (158), Expect = 4e-12, Method: Compositional matrix adjust. Identities = 35/89 (39%), Positives = 50/89 (56%), Gaps = 8/89 (9%) Query 1 ASFGMGCFWEPAESMLKVDGIIDTVSGYTGNKRFDDDKKKTVPSYENVCYGQD-WVEGVQ 59 A+F GCFW + +V G+ T GYT K + P+Y +VC G+ VE VQ Sbjct 5 ATFAAGCFWSVELAFQRVPGVTKTSVGYTQGKTEN-------PTYRDVCSGKTGHVEAVQ 57 Query 60 VTYDDSVISYGELLNVFFDKQKPAPQSRQ 88 + YD S +SY +LL+VF+ K P ++RQ Sbjct 58 MEYDPSQVSYKQLLDVFWKKHDPTQKNRQ 86 >ref|YP_001455126.1| hypothetical protein CKO_03611 [Citrobacter koseri ATCC BAA-895] gb|ABV14690.1| hypothetical protein CKO_03611 [Citrobacter koseri ATCC BAA-895] Length=177 Score = 65.5 bits (158), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 39/103 (38%), Positives = 50/103 (49%), Gaps = 15/103 (15%) Query 1 ASFGMGCFWEPAESMLKVDGIIDTVSGYTGNKRFDDDKKKTVPSYENVCYGQD-WVEGVQ 59 A F MGCFW ++ G+ T +GYTG + P+Y VC GQ E V+ Sbjct 11 ALFAMGCFWGVERLFWQLPGVYSTAAGYTGGYTPN-------PTYREVCSGQTGHAEAVR 63 Query 60 VTYDDSVISYGELLNVFFDKQKPAP-------QSRQYSSIIFP 95 V YD VISY +LL VF++ PA QY S I+P Sbjct 64 VVYDPQVISYEQLLQVFWENHDPAQGMQQGNDHGTQYRSAIYP 106 >ref|YP_002385307.1| methionine sulfoxide reductase A [Escherichia fergusonii ATCC 35469] sp|B7LMP0.1|MSRA_ESCF3 RecName: Full=Peptide methionine sulfoxide reductase MsrA; Short=Protein-methionine-S-oxide reductase; AltName: Full=Peptide-methionine (S)-S-oxide reductase; Short=Peptide Met(O) reductase emb|CAQ91718.1| methionine sulfoxide reductase A [Escherichia fergusonii ATCC 35469] gb|EGC06133.1| peptide-methionine (S)-S-oxide reductase [Escherichia fergusonii B253] Length=212 Score = 66.2 bits (160), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 39/103 (38%), Positives = 52/103 (50%), Gaps = 15/103 (15%) Query 1 ASFGMGCFWEPAESMLKVDGIIDTVSGYTGNKRFDDDKKKTVPSYENVCYGQD-WVEGVQ 59 A F MGCFW ++ G+ T +GYTG + P+Y VC G+ E V+ Sbjct 46 AIFAMGCFWGVERLFWQLPGVYSTAAGYTGGYTPN-------PTYREVCSGETGHAEAVR 98 Query 60 VTYDDSVISYGELLNVFFDKQKPAPQSR-------QYSSIIFP 95 + YD SVISY +LL VF++ PA R QY S I+P Sbjct 99 IVYDPSVISYEQLLQVFWENHDPAQGMRQGNDHGTQYRSAIYP 141 >ref|XP_001446908.1| hypothetical protein [Paramecium tetraurelia strain d4-2] emb|CAK79511.1| unnamed protein product [Paramecium tetraurelia] Length=181 Score = 65.5 bits (158), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 38/106 (36%), Positives = 53/106 (50%), Gaps = 14/106 (13%) Query 1 ASFGMGCFWEPAESMLKVDGIIDTVSGYTGNKRFDDDKKKTVPSYENVCYGQD-WVEGVQ 59 A+ G GCFW ++ G+ + SGY G K +Y++VC G E VQ Sbjct 7 ATLGGGCFWCIEAVFKRIKGVNEVYSGYAGGAN------KNTANYKDVCRGDSGHAEVVQ 60 Query 60 VTYDDSVISYGELLNVFFDKQKPAP-------QSRQYSSIIFPYDE 98 +TYD+S + Y +LL VFF+ P Q QY SIIF ++E Sbjct 61 ITYDESKLKYYDLLTVFFNSHDPTTLNRQGNDQGHQYRSIIFYHNE 106 >ref|YP_003212012.1| methionine sulfoxide reductase A [Cronobacter turicensis z3032] emb|CBA33908.1| Peptide methionine sulfoxide reductase msrA [Cronobacter turicensis z3032] Length=212 Score = 66.2 bits (160), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 40/103 (39%), Positives = 50/103 (49%), Gaps = 15/103 (15%) Query 1 ASFGMGCFWEPAESMLKVDGIIDTVSGYTGNKRFDDDKKKTVPSYENVCYGQD-WVEGVQ 59 A F MGCFW + G+ T +GYTG + P+Y VC GQ E V+ Sbjct 46 ALFAMGCFWGVERLFWPLPGVYSTAAGYTGGYTPN-------PTYREVCSGQTGHAEAVR 98 Query 60 VTYDDSVISYGELLNVFFDKQKPAPQSR-------QYSSIIFP 95 V YD VISY +LL VF++ PA R QY S I+P Sbjct 99 VVYDPKVISYEQLLQVFWENHDPAQGMRQGNDVGTQYRSAIYP 141 >ref|YP_064963.1| bifunctional methionine sulfoxide reductase A/B protein [Desulfotalea psychrophila LSv54] emb|CAG35956.1| probable peptide methionine sulfoxide reductase [Desulfotalea psychrophila LSv54] Length=366 Score = 67.4 bits (163), Expect = 5e-12, Method: Composition-based stats. Identities = 43/101 (43%), Positives = 55/101 (54%), Gaps = 15/101 (15%) Query 6 GCFWEPAESMLKVDGIIDTVSGYTGNKRFDDDKKKTVPSYENVCYGQD-WVEGVQVTYDD 64 GCFW + K+ GI+D VSGY+G D+K PSYE V G+ +E VQ+ +D Sbjct 54 GCFWCLEADLEKLPGIVDVVSGYSGG-----DQKN--PSYEEVSTGRTGHLEAVQIRFDP 106 Query 65 SVISYGELLNVFFDKQKPA-------PQSRQYSSIIFPYDE 98 VISY E+L FF P + RQYSS IF +DE Sbjct 107 EVISYEEILQRFFRLHDPTDAGGSFVDRGRQYSSAIFYHDE 147 >emb|CBX28137.1| Peptide methionine sulfoxide reductase msrA/msrB [uncultured Desulfobacterium sp.] Length=350 Score = 67.4 bits (163), Expect = 5e-12, Method: Compositional matrix adjust. Identities = 40/106 (38%), Positives = 55/106 (52%), Gaps = 15/106 (14%) Query 1 ASFGMGCFWEPAESMLKVDGIIDTVSGYTGNKRFDDDKKKTVPSYENVCYG-QDWVEGVQ 59 A+F GCFW KV G+ +SGYTG KK P+YE VC G + +E VQ Sbjct 24 ATFAGGCFWCSESDFAKVKGVTKVISGYTGG-------KKENPTYEEVCSGTTEHLEAVQ 76 Query 60 VTYDDSVISYGELLNVFFDKQKP-------APQSRQYSSIIFPYDE 98 V YD +++Y +LL VF+ P A + QY S +F ++E Sbjct 77 VLYDPLLVTYEDLLQVFWKHINPTDPGGQFADRGSQYQSAVFYHNE 122 >ref|YP_003125663.1| peptide methionine sulfoxide reductase [Chitinophaga pinensis DSM 2588] gb|ACU63462.1| peptide methionine sulfoxide reductase [Chitinophaga pinensis DSM 2588] Length=228 Score = 66.2 bits (160), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 41/106 (39%), Positives = 52/106 (49%), Gaps = 15/106 (14%) Query 1 ASFGMGCFWEPAESMLKVDGIIDTVSGYTGNKRFDDDKKKTVPSYENVCYGQD-WVEGVQ 59 A+F GCFW E +++G+I SG+TG K + PSYE VC G E Sbjct 55 ATFAAGCFWCVEEQFKQLEGVISVESGFTGGKVPN-------PSYELVCTGTTGHAEACN 107 Query 60 VTYDDSVISYGELLNVFFDKQKPAPQSR-------QYSSIIFPYDE 98 + YD S ISY ELL FF P +R QY S IF ++E Sbjct 108 IVYDPSKISYDELLAAFFVAHNPTTLNRQGNDEGTQYRSAIFYHNE 153 >sp|Q4J9L3.2|MSRA_SULAC RecName: Full=Peptide methionine sulfoxide reductase MsrA; Short=Protein-methionine-S-oxide reductase; AltName: Full=Peptide-methionine (S)-S-oxide reductase; Short=Peptide Met(O) reductase Length=176 Score = 65.1 bits (157), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 39/106 (37%), Positives = 54/106 (51%), Gaps = 15/106 (14%) Query 1 ASFGMGCFWEPAESMLKVDGIIDTVSGYTGNKRFDDDKKKTVPSYENVCYGQD-WVEGVQ 59 A+ G GCFW +V G++ GY+G K + P+YE VC + E VQ Sbjct 4 ATLGGGCFWCTEAVFKRVKGVVSVKPGYSGGKVPN-------PTYEEVCTDETGHAEVVQ 56 Query 60 VTYDDSVISYGELLNVFFDKQKPAPQSR-------QYSSIIFPYDE 98 +T+D SVI+Y ELL +FF+ P +R QY SII + E Sbjct 57 ITFDPSVITYRELLEIFFEIHDPTTPNRQGNDVGSQYRSIILYHSE 102 >gb|AET64963.1| Peptide methionine sulfoxide reductase MsrA [Methanosaeta harundinacea 6Ac] Length=182 Score = 65.1 bits (157), Expect = 6e-12, Method: Compositional matrix adjust. Identities = 38/105 (36%), Positives = 53/105 (50%), Gaps = 15/105 (14%) Query 1 ASFGMGCFWEPAESMLKVDGIIDTVSGYTGNKRFDDDKKKTVPSYENVCYGQD-WVEGVQ 59 A+F GCFW + ++G+I T GYTG T P+YE VC + E V+ Sbjct 29 ATFAAGCFWGVEAAFRDLEGVISTAVGYTGG-------STTNPTYEEVCTDRTGHAEAVE 81 Query 60 VTYDDSVISYGELLNVFFDKQKPAPQSR-------QYSSIIFPYD 97 V YD V+S+ ELL++F+ P +R QY S IF +D Sbjct 82 VVYDPKVVSFEELLDLFWSIHDPTTMNRQGPDVGSQYRSAIFFHD 126 >gb|EGC97639.1| methionine sulfoxide reductase A [Escherichia fergusonii ECD227] Length=221 Score = 65.9 bits (159), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 39/103 (38%), Positives = 52/103 (50%), Gaps = 15/103 (15%) Query 1 ASFGMGCFWEPAESMLKVDGIIDTVSGYTGNKRFDDDKKKTVPSYENVCYGQD-WVEGVQ 59 A F MGCFW ++ G+ T +GYTG + P+Y VC G+ E V+ Sbjct 55 AIFAMGCFWGVERLFWQLPGVYSTAAGYTGGYTPN-------PTYREVCSGETGHAEAVR 107 Query 60 VTYDDSVISYGELLNVFFDKQKPAPQSR-------QYSSIIFP 95 + YD SVISY +LL VF++ PA R QY S I+P Sbjct 108 IVYDPSVISYEQLLQVFWENHDPAQGMRQGNDHGTQYRSAIYP 150 >ref|YP_003260919.1| methionine sulfoxide reductase A [Pectobacterium wasabiae WPP163] gb|ACX89312.1| peptide methionine sulfoxide reductase [Pectobacterium wasabiae WPP163] Length=212 Score = 65.9 bits (159), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 37/89 (42%), Positives = 46/89 (52%), Gaps = 8/89 (9%) Query 1 ASFGMGCFWEPAESMLKVDGIIDTVSGYTGNKRFDDDKKKTVPSYENVCYGQ-DWVEGVQ 59 A F MGCFW + GI T +GY G + P+Y VC GQ D E V+ Sbjct 46 AIFAMGCFWGAERLFWQQQGIYSTAAGYIGGYTPN-------PTYREVCSGQTDHAEAVR 98 Query 60 VTYDDSVISYGELLNVFFDKQKPAPQSRQ 88 V +D +VISYGELL F++ PA RQ Sbjct 99 VVFDPAVISYGELLQQFWENHDPAQGMRQ 127 >ref|YP_004383182.1| peptide methionine sulfoxide reductase MsrB/MsrA [Methanosaeta concilii GP6] gb|AEB67364.1| peptide methionine sulfoxide reductase MsrB/MsrA [Methanosaeta concilii GP6] Length=327 Score = 67.0 bits (162), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 40/106 (38%), Positives = 53/106 (50%), Gaps = 15/106 (14%) Query 1 ASFGMGCFWEPAESMLKVDGIIDTVSGYTGNKRFDDDKKKTVPSYENVCYGQD-WVEGVQ 59 A+F GCFW +V G+++T GYTG D PSY VC G E VQ Sbjct 171 ATFAAGCFWGVEARFQQVRGVLETKVGYTGGTAPD-------PSYAQVCTGTTGHAEAVQ 223 Query 60 VTYDDSVISYGELLNVFFDKQKPAPQSR-------QYSSIIFPYDE 98 + YD V+SY ELL++F+ P +R QY S IF ++E Sbjct 224 IKYDPKVVSYRELLSIFWRMHDPTTPNRQGPDIGTQYRSAIFYHNE 269 >ref|YP_003727183.1| peptide methionine sulfoxide reductase [Methanohalobium evestigatum Z-7303] gb|ADI74387.1| peptide methionine sulfoxide reductase [Methanohalobium evestigatum Z-7303] Length=156 Score = 64.7 bits (156), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 36/106 (34%), Positives = 59/106 (56%), Gaps = 15/106 (14%) Query 1 ASFGMGCFWEPAESMLKVDGIIDTVSGYTGNKRFDDDKKKTVPSYENVCYGQD-WVEGVQ 59 A+F GCFW + +++G++ T GYTG + P+Y++VC G+ E V+ Sbjct 4 ATFAAGCFWGVEAAFRQIEGLLSTRVGYTGGTWEN-------PTYKDVCTGKTGHAEAVE 56 Query 60 VTYDDSVISYGELLNVFFDKQKPAPQSR-------QYSSIIFPYDE 98 VT++ S++SY +LL+VF+ P +R QY S IF ++E Sbjct 57 VTFEPSIVSYEKLLDVFWKIHDPTTLNRQGPDIGTQYRSAIFYHNE 102 >ref|YP_002331999.1| msrA gene product [Escherichia coli O127:H6 str. E2348/69] sp|B7UQN3.1|MSRA_ECO27 RecName: Full=Peptide methionine sulfoxide reductase MsrA; Short=Protein-methionine-S-oxide reductase; AltName: Full=Peptide-methionine (S)-S-oxide reductase; Short=Peptide Met(O) reductase emb|CAS12097.1| methionine sulfoxide reductase A [Escherichia coli O127:H6 str. E2348/69] Length=212 Score = 65.5 bits (158), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 39/103 (38%), Positives = 51/103 (50%), Gaps = 15/103 (15%) Query 1 ASFGMGCFWEPAESMLKVDGIIDTVSGYTGNKRFDDDKKKTVPSYENVCYGQD-WVEGVQ 59 A F MGCFW ++ G+ T +GYTG + P+Y VC G E V+ Sbjct 46 AIFAMGCFWGVERLFWQLHGVYSTAAGYTGGYTPN-------PTYREVCSGDTGHAEAVR 98 Query 60 VTYDDSVISYGELLNVFFDKQKPAPQSR-------QYSSIIFP 95 + YD SVISY +LL VF++ PA R QY S I+P Sbjct 99 IVYDPSVISYEQLLQVFWENHDPAQGMRQGNDHGTQYRSAIYP 141 >ref|NP_290851.1| msrA gene product [Escherichia coli O157:H7 str. EDL933] ref|NP_313224.1| methionine sulfoxide reductase A [Escherichia coli O157:H7 str. Sakai] ref|ZP_02776112.1| methionine-S-sulfoxide reductase [Escherichia coli O157:H7 str. EC4113] ref|ZP_02779802.1| methionine-S-sulfoxide reductase [Escherichia coli O157:H7 str. EC4401] ref|ZP_02785474.1| methionine-S-sulfoxide reductase [Escherichia coli O157:H7 str. EC4501] ref|ZP_02791511.1| methionine-S-sulfoxide reductase [Escherichia coli O157:H7 str. EC4486] ref|ZP_02799071.1| methionine-S-sulfoxide reductase [Escherichia coli O157:H7 str. EC4196] ref|ZP_02807747.1| methionine-S-sulfoxide reductase [Escherichia coli O157:H7 str. EC4076] ref|ZP_02809869.1| methionine-S-sulfoxide reductase [Escherichia coli O157:H7 str. EC869] ref|ZP_02822801.1| methionine-S-sulfoxide reductase [Escherichia coli O157:H7 str. EC508] ref|ZP_03082628.1| methionine sulfoxide reductase A [Escherichia coli O157:H7 str. EC4024] ref|ZP_03251488.1| methionine-S-sulfoxide reductase [Escherichia coli O157:H7 str. EC4206] ref|ZP_03255666.1| methionine-S-sulfoxide reductase [Escherichia coli O157:H7 str. EC4045] ref|ZP_03260156.1| methionine-S-sulfoxide reductase [Escherichia coli O157:H7 str. EC4042] ref|YP_002273762.1| msrA gene product [Escherichia coli O157:H7 str. EC4115] ref|ZP_03441003.1| methionine-S-sulfoxide reductase [Escherichia coli O157:H7 str. TW14588] ref|YP_003081077.1| methionine sulfoxide reductase A [Escherichia coli O157:H7 str. TW14359] ref|ZP_05939620.1| methionine sulfoxide reductase A [Escherichia coli O157:H7 str. FRIK2000] ref|ZP_05947941.1| methionine sulfoxide reductase A [Escherichia coli O157:H7 str. FRIK966] ref|YP_003502451.1| peptide methionine sulfoxide reductase msrA (protein- methionine-S-oxide reductase) (peptide-methionine (S)-S-oxide reductase) (peptide Met(O) reductase) [Escherichia coli O55:H7 str. CB9615] sp|Q8XCG3.3|MSRA_ECO57 RecName: Full=Peptide methionine sulfoxide reductase MsrA; Short=Protein-methionine-S-oxide reductase; AltName: Full=Peptide-methionine (S)-S-oxide reductase; Short=Peptide Met(O) reductase sp|B5Z3H5.1|MSRA_ECO5E RecName: Full=Peptide methionine sulfoxide reductase MsrA; Short=Protein-methionine-S-oxide reductase; AltName: Full=Peptide-methionine (S)-S-oxide reductase; Short=Peptide Met(O) reductase gb|AAG59417.1|AE005654_6 peptide methionine sulfoxide reductase [Escherichia coli O157:H7 str. EDL933] dbj|BAB38620.1| peptide methionine sulfoxide reductase [Escherichia coli O157:H7 str. Sakai] gb|EDU34127.1| methionine-S-sulfoxide reductase [Escherichia coli O157:H7 str. EC4196] gb|EDU52971.1| methionine-S-sulfoxide reductase [Escherichia coli O157:H7 str. EC4113] gb|EDU68735.1| methionine-S-sulfoxide reductase [Escherichia coli O157:H7 str. EC4076] gb|EDU76320.1| methionine-S-sulfoxide reductase [Escherichia coli O157:H7 str. EC4401] gb|EDU82697.1| methionine-S-sulfoxide reductase [Escherichia coli O157:H7 str. EC4486] gb|EDU87343.1| methionine-S-sulfoxide reductase [Escherichia coli O157:H7 str. EC4501] gb|EDU93341.1| methionine-S-sulfoxide reductase [Escherichia coli O157:H7 str. EC869] gb|EDU97925.1| methionine-S-sulfoxide reductase [Escherichia coli O157:H7 str. EC508] gb|EDZ78553.1| methionine-S-sulfoxide reductase [Escherichia coli O157:H7 str. EC4206] gb|EDZ84301.1| methionine-S-sulfoxide reductase [Escherichia coli O157:H7 str. EC4045] gb|EDZ87641.1| methionine-S-sulfoxide reductase [Escherichia coli O157:H7 str. EC4042] gb|ACI37431.1| methionine-S-sulfoxide reductase [Escherichia coli O157:H7 str. EC4115] gb|ACI73226.1| peptide methionine sulfoxide reductase [Escherichia coli] gb|ACI73227.1| peptide methionine sulfoxide reductase [Escherichia coli] gb|ACI73228.1| peptide methionine sulfoxide reductase [Escherichia coli] gb|ACI73230.1| peptide methionine sulfoxide reductase [Escherichia coli] gb|EEC29564.1| methionine-S-sulfoxide reductase [Escherichia coli O157:H7 str. TW14588] gb|ACT75001.1| methionine sulfoxide reductase A [Escherichia coli O157:H7 str. TW14359] gb|ADD59467.1| Peptide methionine sulfoxide reductase msrA (Protein- methionine-S-oxide reductase) (Peptide-methionine (S)-S-oxide reductase) (Peptide Met(O) reductase) [Escherichia coli O55:H7 str. CB9615] gb|EFW65300.1| Peptide methionine sulfoxide reductase MsrA [Escherichia coli O157:H7 str. EC1212] gb|EFX08624.1| methionine sulfoxide reductase A [Escherichia coli O157:H7 str. G5101] gb|EFX13412.1| methionine sulfoxide reductase A [Escherichia coli O157:H- str. 493-89] gb|EFX18189.1| methionine sulfoxide reductase A [Escherichia coli O157:H- str. H 2687] gb|EFX23022.1| methionine sulfoxide reductase A [Escherichia coli O55:H7 str. 3256-97 TW 07815] gb|EFX28029.1| methionine sulfoxide reductase A [Escherichia coli O55:H7 str. USDA 5905] gb|EFX32874.1| methionine sulfoxide reductase A [Escherichia coli O157:H7 str. LSU-61] gb|EGD69194.1| Peptide methionine sulfoxide reductase MsrA [Escherichia coli O157:H7 str. 1125] gb|EGD70427.1| Peptide methionine sulfoxide reductase MsrA [Escherichia coli O157:H7 str. 1044] Length=212 Score = 65.5 bits (158), Expect = 7e-12, Method: Compositional matrix adjust. Identities = 39/103 (38%), Positives = 51/103 (50%), Gaps = 15/103 (15%) Query 1 ASFGMGCFWEPAESMLKVDGIIDTVSGYTGNKRFDDDKKKTVPSYENVCYGQD-WVEGVQ 59 A F MGCFW ++ G+ T +GYTG + P+Y VC G E V+ Sbjct 46 AIFAMGCFWGVERLFWQLHGVYSTAAGYTGGYTPN-------PTYREVCSGDTGHAEAVR 98 Query 60 VTYDDSVISYGELLNVFFDKQKPAPQSR-------QYSSIIFP 95 + YD SVISY +LL VF++ PA R QY S I+P Sbjct 99 IVYDPSVISYEQLLQVFWENHDPAQGMRQGNDHGTQYRSAIYP 141 >ref|YP_003304230.1| peptide methionine sulfoxide reductase [Sulfurospirillum deleyianum DSM 6946] gb|ACZ12195.1| peptide methionine sulfoxide reductase [Sulfurospirillum deleyianum DSM 6946] Length=175 Score = 65.1 bits (157), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 41/106 (39%), Positives = 55/106 (52%), Gaps = 15/106 (14%) Query 1 ASFGMGCFWEPAESMLKVDGIIDTVSGYTGNKRFDDDKKKTVPSYENVCYG-QDWVEGVQ 59 A+ G GCFW + G+ID +SGY G K + P+YE V G + E VQ Sbjct 6 ATLGGGCFWCLEAVFEETRGVIDVISGYAGGKLPN-------PTYEAVSSGTTEHAEVVQ 58 Query 60 VTYDDSVISYGELLNVFFDKQKPAPQS-------RQYSSIIFPYDE 98 +TYD S+ISY E+L +F+ P + QY SIIF +DE Sbjct 59 ITYDVSIISYEEILKIFWLIHDPTSLNAQGNDVGTQYRSIIFYHDE 104 >ref|YP_003893415.1| peptide methionine sulfoxide reductase [Methanoplanus petrolearius DSM 11571] gb|ADN34977.1| peptide methionine sulfoxide reductase [Methanoplanus petrolearius DSM 11571] Length=169 Score = 64.7 bits (156), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 41/104 (39%), Positives = 52/104 (50%), Gaps = 15/104 (14%) Query 3 FGMGCFWEPAESMLKVDGIIDTVSGYTGNKRFDDDKKKTVPSYENVCYGQD-WVEGVQVT 61 F GCFW E+ KV G+I T GYTG K D+ P YE+VC G E V+VT Sbjct 8 FAGGCFWHVEEAFGKVRGVIRTRVGYTGGK-LDN------PCYEDVCTGNTGHAEAVEVT 60 Query 62 YDDSVISYGELLNVFFDKQKPAPQSR-------QYSSIIFPYDE 98 + +SY +LL FF+ P ++ QY S IF DE Sbjct 61 FAPEAVSYRDLLKEFFNMHDPTTLNKQGPDVGTQYRSAIFCRDE 104 >gb|ACI73229.1| peptide methionine sulfoxide reductase [Escherichia coli] Length=212 Score = 65.5 bits (158), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 39/103 (38%), Positives = 51/103 (50%), Gaps = 15/103 (15%) Query 1 ASFGMGCFWEPAESMLKVDGIIDTVSGYTGNKRFDDDKKKTVPSYENVCYGQD-WVEGVQ 59 A F MGCFW ++ G+ T +GYTG + P+Y VC G E V+ Sbjct 46 AIFAMGCFWGVERLFWQLHGVYSTAAGYTGGYTPN-------PTYREVCSGDTGHAEAVR 98 Query 60 VTYDDSVISYGELLNVFFDKQKPAPQSR-------QYSSIIFP 95 + YD SVISY +LL VF++ PA R QY S I+P Sbjct 99 IVYDPSVISYEQLLQVFWENHDPAQGMRQGNDHGTQYRSAIYP 141 >ref|YP_672314.1| methionine sulfoxide reductase A [Escherichia coli 536] ref|ZP_03032393.1| methionine-S-sulfoxide reductase [Escherichia coli F11] sp|Q0T9G6.1|MSRA_ECOL5 RecName: Full=Peptide methionine sulfoxide reductase MsrA; Short=Protein-methionine-S-oxide reductase; AltName: Full=Peptide-methionine (S)-S-oxide reductase; Short=Peptide Met(O) reductase gb|ABG72413.1| peptide methionine sulfoxide reductase MsrA [Escherichia coli 536] gb|EDV68652.1| methionine-S-sulfoxide reductase [Escherichia coli F11] Length=212 Score = 65.5 bits (158), Expect = 8e-12, Method: Compositional matrix adjust. Identities = 39/103 (38%), Positives = 51/103 (50%), Gaps = 15/103 (15%) Query 1 ASFGMGCFWEPAESMLKVDGIIDTVSGYTGNKRFDDDKKKTVPSYENVCYGQD-WVEGVQ 59 A F MGCFW ++ G+ T +GYTG + P+Y VC G E V+ Sbjct 46 AIFAMGCFWGVERLFWQLPGVYSTAAGYTGGYTPN-------PTYREVCSGDTGHAEAVR 98 Query 60 VTYDDSVISYGELLNVFFDKQKPAP-------QSRQYSSIIFP 95 + YD SVISY +LL VF++ PA S QY S I+P Sbjct 99 IVYDPSVISYEQLLQVFWENHDPAQGMRQGNDHSTQYRSAIYP 141 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Jan 10, 2012 5:03 PM Number of letters in database: 1,493,308,554 Number of sequences in database: 16,852,130 Lambda K H 0.317 0.137 0.424 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 16852130 Number of Hits to DB: 125094766 Number of extensions: 4783705 Number of successful extensions: 10410 Number of sequences better than 100: 482 Number of HSP's better than 100 without gapping: 0 Number of HSP's gapped: 10044 Number of HSP's successfully gapped: 482 Length of query: 98 Length of database: 5788275850 Length adjustment: 67 Effective length of query: 31 Effective length of database: 4659183140 Effective search space: 144434677340 Effective search space used: 144434677340 T: 11 A: 40 X1: 16 (7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (20.4 bits) S2: 68 (30.8 bits)