BLASTP 2.2.26+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Stephen F. Altschul, John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. RID: H16CCFPV01N Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 16,971,855 sequences; 5,827,192,767 total letters Query= scaffold_26:subseq(798347,30000) [translate(1)] Length=137 Score E Sequences producing significant alignments: (Bits) Value gb|EGJ48633.1| peptide methionine sulfoxide reductase [Desulf... 110 2e-28 gb|EGB09097.1| selenoprotein, partial [Aureococcus anophageff... 107 7e-28 ref|YP_400954.1| unnamed protein product [Synechococcus elong... 107 8e-27 ref|YP_172867.1| msrA gene product [Synechococcus elongatus P... 106 9e-27 ref|NP_001232951.1| uncharacterized protein LOC100164380 [Acy... 104 5e-26 ref|YP_004671018.1| peptide methionine sulfoxide reductase ms... 101 9e-26 ref|YP_591088.1| methionine sulfoxide reductase A [Candidatus... 100 2e-25 ref|XP_002286093.1| hypothetical protein THAPSDRAFT_30913 [Th... 100 2e-25 ref|YP_876251.1| peptide methionine sulfoxide reductase [Cena... 100 3e-25 ref|YP_002755462.1| methionine-S-sulfoxide reductase [Acidoba... 100 5e-25 ref|YP_001733484.1| methionine sulfoxide reductase A [Synecho... 101 7e-25 ref|YP_003889771.1| peptide methionine sulfoxide reductase [C... 101 7e-25 ref|XP_002949120.1| peptide methionine-S-sulfoxide reductase ... 99.4 8e-25 ref|YP_002492479.1| peptide methionine sulfoxide reductase [A... 100 8e-25 ref|ZP_06967471.1| peptide methionine sulfoxide reductase [Kt... 99.0 1e-24 ref|ZP_08984375.1| Peptide methionine sulfoxide reductase msr... 99.8 2e-24 ref|ZP_08465978.1| peptide-methionine (S)-S-oxide reductase [... 98.2 3e-24 gb|AET64963.1| Peptide methionine sulfoxide reductase MsrA [M... 98.6 3e-24 ref|ZP_08427694.1| methionine-S-sulfoxide reductase [Lyngbya ... 99.4 3e-24 ref|YP_004290627.1| peptide methionine sulfoxide reductase Ms... 98.2 3e-24 gb|EHO69907.1| peptide methionine sulfoxide reductase [Singul... 97.8 3e-24 gb|ABK23082.1| unknown [Picea sitchensis] >gb|ABK26828.1| unk... 98.2 4e-24 ref|ZP_05027190.1| methionine-S-sulfoxide reductase [Microcol... 99.4 4e-24 emb|CBW25365.1| peptide methionine sulfoxide reductase [Bacte... 97.4 6e-24 ref|YP_002380216.1| methionine sulfoxide reductase A [Cyanoth... 99.0 6e-24 ref|YP_002931909.1| Peptide methionine-S-oxide reductase, [Ed... 98.6 6e-24 ref|YP_002134344.1| peptide methionine sulfoxide reductase [A... 98.6 6e-24 ref|YP_003301967.1| peptide methionine sulfoxide reductase [T... 99.0 7e-24 ref|YP_001549852.1| peptide methionine sulfoxide reductase [M... 96.7 8e-24 ref|YP_001635268.1| peptide methionine sulfoxide reductase [C... 97.4 9e-24 ref|YP_465100.1| peptide methionine sulfoxide reductase [Anae... 98.2 1e-23 ref|YP_001656745.1| methionine sulfoxide reductase A [Microcy... 98.2 1e-23 ref|YP_003727183.1| peptide methionine sulfoxide reductase [M... 96.3 1e-23 ref|YP_004673357.1| bifunctional peptide-methionine (S)-S-oxi... 99.8 1e-23 ref|YP_003542155.1| peptide methionine sulfoxide reductase [M... 96.7 1e-23 emb|CAO88907.1| unnamed protein product [Microcystis aerugino... 97.8 1e-23 gb|EGB10697.1| selenoprotein, partial [Aureococcus anophageff... 96.7 2e-23 ref|YP_004519713.1| peptide methionine sulfoxide reductase Ms... 96.3 2e-23 gb|EGZ22678.1| hypothetical protein PHYSODRAFT_314189 [Phytop... 96.3 2e-23 gb|ADI18514.1| peptide methionine sulfoxide reductase [uncult... 97.1 2e-23 ref|YP_001591650.1| methionine sulfoxide reductase A [Salmone... 97.1 2e-23 ref|YP_001666611.1| methionine sulfoxide reductase A [Pseudom... 97.1 3e-23 ref|ZP_09247552.1| methionine-S-sulfoxide reductase [Acaryoch... 96.7 4e-23 gb|ABK24273.1| unknown [Picea sitchensis] 95.9 4e-23 emb|CAJ72127.1| strongly similar to peptide methionine sulfox... 97.4 4e-23 ref|ZP_01264649.1| Peptide methionine sulfoxide reductase [Ca... 94.7 4e-23 ref|YP_476496.1| methionine-S-sulfoxide reductase [Synechococ... 96.7 4e-23 ref|NP_925462.1| methionine sulfoxide reductase A [Gloeobacte... 96.7 4e-23 ref|NP_485715.1| unnamed protein product [Nostoc sp. PCC 7120... 96.7 4e-23 gb|ADD72739.1| peptide methionine sulfoxide reductase MsrB/ms... 98.2 4e-23 ref|YP_344070.1| methionine sulfoxide reductase A [Nitrosococ... 96.7 4e-23 ref|YP_001097623.1| peptide methionine sulfoxide reductase [M... 95.1 4e-23 ref|NP_219071.1| bifunctional methionine sulfoxide reductase ... 98.2 5e-23 gb|ADI23397.1| peptide methionine sulfoxide reductase [uncult... 94.7 5e-23 ref|YP_001299299.1| peptide methionine sulfoxide reductase [B... 94.7 5e-23 ref|YP_004665205.1| methionine-S-sulfoxide reductase [Myxococ... 96.3 6e-23 ref|YP_004181597.1| peptide methionine sulfoxide reductase [T... 94.7 6e-23 ref|XP_002179840.1| predicted protein [Phaeodactylum tricornu... 94.0 6e-23 ref|ZP_08139092.1| methionine sulfoxide reductase A [Pseudomo... 96.3 7e-23 ref|ZP_03273701.1| peptide methionine sulfoxide reductase [Ar... 96.3 7e-23 ref|YP_001517118.1| msrA gene product [Acaryochloris marina M... 95.9 7e-23 ref|YP_265612.1| msrB gene product [Candidatus Pelagibacter u... 94.0 7e-23 ref|YP_001378527.1| peptide methionine sulfoxide reductase [A... 95.9 8e-23 ref|YP_004351628.1| peptide methionine sulfoxide reductase [P... 95.9 8e-23 ref|YP_003650922.1| peptide methionine sulfoxide reductase [T... 95.9 8e-23 ref|YP_051685.1| msrA gene product [Pectobacterium atroseptic... 95.9 8e-23 ref|XP_002426843.1| EIP28, putative [Pediculus humanus corpor... 95.9 9e-23 ref|YP_321699.1| unnamed protein product [Anabaena variabilis... 95.9 9e-23 ref|ZP_01438982.1| methionine sulfoxide reductase A [Fulvimar... 95.9 1e-22 ref|ZP_01905792.1| peptide methionine sulfoxide reductase [Pl... 95.5 1e-22 ref|YP_001867564.1| methionine sulfoxide reductase A [Nostoc ... 95.5 1e-22 ref|ZP_05061057.1| methionine-S-sulfoxide reductase [gamma pr... 94.4 1e-22 ref|ZP_08491961.1| Peptide methionine sulfoxide reductase msr... 95.5 1e-22 ref|XP_001637137.1| predicted protein [Nematostella vectensis... 94.0 1e-22 ref|YP_002483258.1| peptide methionine sulfoxide reductase [C... 95.5 1e-22 ref|ZP_01629661.1| methionine sulfoxide reductase A [Nodulari... 95.5 1e-22 gb|ADO77343.1| methionine-R-sulfoxide reductase [Halanaerobiu... 98.6 1e-22 ref|XP_001307970.1| possible peptide methionine sulfoxide red... 94.0 1e-22 ref|YP_003994942.1| methionine-R-sulfoxide reductase [Halanae... 98.2 2e-22 ref|YP_003356266.1| peptide methionine sulfoxide reductase Ms... 94.0 2e-22 ref|XP_003212572.1| PREDICTED: peptide methionine sulfoxide r... 93.6 2e-22 ref|ZP_06305438.1| Methionine sulfoxide reductase A [Raphidio... 95.1 2e-22 ref|YP_346192.1| methionine sulfoxide reductase A [Pseudomona... 95.1 2e-22 ref|YP_002372382.1| methionine sulfoxide reductase A [Cyanoth... 95.1 2e-22 ref|NP_742503.1| methionine sulfoxide reductase A [Pseudomona... 95.1 2e-22 gb|ADR58067.1| MsrA [Pseudomonas putida BIRD-1] 94.7 2e-22 ref|YP_001618649.1| msrA2 gene product [Sorangium cellulosum ... 97.8 2e-22 gb|EGS56459.1| methionine-S-sulfoxide reductase [Vibrio chole... 94.7 2e-22 ref|NP_967993.1| hypothetical protein Bd1058 [Bdellovibrio ba... 94.4 2e-22 ref|YP_001265718.1| methionine sulfoxide reductase A [Pseudom... 95.1 3e-22 ref|YP_413133.1| methionine sulfoxide reductase A [Nitrosospi... 93.2 3e-22 ref|YP_473948.1| methionine-S-sulfoxide reductase [Synechococ... 94.7 3e-22 ref|YP_003137974.1| unnamed protein product [Cyanothece sp. P... 94.4 3e-22 ref|NP_681675.1| unnamed protein product [Thermosynechococcus... 94.7 3e-22 ref|YP_635173.1| methionine-S-sulfoxide reductase [Myxococcus... 94.4 3e-22 ref|YP_004219095.1| peptide methionine sulfoxide reductase [G... 92.8 3e-22 gb|EGH57366.1| methionine sulfoxide reductase A [Pseudomonas ... 94.0 4e-22 ref|YP_004582223.1| unnamed protein product [Frankia symbiont... 94.4 4e-22 ref|YP_594497.1| peptide methionine sulfoxide reductase [Laws... 92.8 4e-22 emb|CBE67521.1| Peptide methionine sulfoxide reductase msrA (... 92.0 4e-22 ALIGNMENTS >gb|EGJ48633.1| peptide methionine sulfoxide reductase [Desulfovibrio africanus str. Walvis Bay] Length=230 Score = 110 bits (276), Expect = 2e-28, Method: Compositional matrix adjust. Identities = 58/139 (42%), Positives = 84/139 (60%), Gaps = 10/139 (7%) Query 1 AMGUFWGPQRDFDQTEGIANTVVGYSGSVSRDSTVNPTYRNIRDYAESIRITYNADKLKY 60 AMGUFWGP F EGI T VGY+G ST +PTYR I D++E+++I Y+ + Y Sbjct 28 AMGUFWGPDSRFGSIEGIWRTRVGYAGG----STPDPTYRRIGDHSETLQIEYDPQTIDY 83 Query 61 EDLLEMFFDMHHPSDSRYGTQYRSAIFVYSEEQKQLAEAACK----KRGSVGELVKIEDA 116 +LL +F++ H PS + QY S IF EE+++LAE + + +RG V ++E Sbjct 84 AELLRLFWEGHEPSRPAWSRQYASVIFWVDEEERRLAEESLREWNARRGGV--YTRVERL 141 Query 117 SDFYRGEEYHQKYVEKATS 135 +FYR E+YHQKY + + Sbjct 142 EEFYRAEDYHQKYYLRGAT 160 >gb|EGB09097.1| selenoprotein, partial [Aureococcus anophagefferens] Length=185 Score = 107 bits (268), Expect = 7e-28, Method: Compositional matrix adjust. Identities = 55/132 (42%), Positives = 78/132 (59%), Gaps = 5/132 (4%) Query 1 AMGUFWGPQRDFDQTEGIANTVVGYSGSVSRDSTVNPTYRNIRDYAESIRITYNADKLKY 60 AMGUFWGP+ F TEGI VGY G PTY I+D+ E++++ ++ +K+KY Sbjct 47 AMGUFWGPESVFASTEGILEHRVGYCGG----KEAYPTYEAIKDHTEAVQVEFDPEKIKY 102 Query 61 EDLLEMFFDMHHPSDSRYGTQYRSAIFVYSEEQKQLAEAACKKRGSVGELVKIEDASDFY 120 ED++ D P + Y TQYRSAIF + +EQK++ E G+ + V +E Y Sbjct 103 EDVIRRVLD-EAPREPAYSTQYRSAIFYHDDEQKRILERKVADMGAAAQYVAVEPYHVMY 161 Query 121 RGEEYHQKYVEK 132 R EEYHQ+Y+ K Sbjct 162 RAEEYHQQYLSK 173 >ref|YP_400954.1| unnamed protein product [Synechococcus elongatus PCC 7942] gb|ABB57967.1| peptide methionine sulfoxide reductase [Synechococcus elongatus PCC 7942] Length=246 Score = 107 bits (266), Expect = 8e-27, Method: Compositional matrix adjust. Identities = 58/150 (39%), Positives = 84/150 (56%), Gaps = 20/150 (13%) Query 3 GUFWGPQRDFDQTEGIANTVVGYSGSVSRDSTVNPTYRNI----RDYAESIRITYNADKL 58 G FWG ++ F Q G+ +T VGY+G + T NP YR + + E +R+ Y+ D++ Sbjct 54 GCFWGTEKQFWQLPGVYSTAVGYAGGL----TPNPNYREVCSGMTGHNEVVRVAYDPDRI 109 Query 59 KYEDLLEMFFDMHHPSDSR-----YGTQYRSAIFVYSEEQKQLA-------EAACKKRGS 106 Y DLL+ F++ H P+ GTQYRS I+ Y+ EQKQ+A +A K +G Sbjct 110 SYADLLKAFWESHDPTQGMGQGPDRGTQYRSGIYCYTPEQKQIALASQAAYQAVLKAKGY 169 Query 107 VGELVKIEDASDFYRGEEYHQKYVEKATSR 136 +I DA FY EEYHQ+Y++K SR Sbjct 170 GAITTEIIDAPTFYFAEEYHQQYLDKPGSR 199 >ref|YP_172867.1| msrA gene product [Synechococcus elongatus PCC 6301] dbj|BAD80347.1| peptide methionine sulfoxide reductase [Synechococcus elongatus PCC 6301] Length=246 Score = 106 bits (265), Expect = 9e-27, Method: Compositional matrix adjust. Identities = 58/150 (39%), Positives = 84/150 (56%), Gaps = 20/150 (13%) Query 3 GUFWGPQRDFDQTEGIANTVVGYSGSVSRDSTVNPTYRNI----RDYAESIRITYNADKL 58 G FWG ++ F Q G+ +T VGY+G + T NP YR + + E +R+ Y+ D++ Sbjct 54 GCFWGTEKQFWQLPGVYSTAVGYAGGL----TPNPNYREVCSGMTGHNEVVRVAYDPDRI 109 Query 59 KYEDLLEMFFDMHHPSDSR-----YGTQYRSAIFVYSEEQKQLA-------EAACKKRGS 106 Y DLL+ F++ H P+ GTQYRS I+ Y+ EQKQ+A +A K +G Sbjct 110 SYADLLKAFWESHDPTQGMGQGPDRGTQYRSGIYCYTPEQKQIALASQAAYQAVLKAKGY 169 Query 107 VGELVKIEDASDFYRGEEYHQKYVEKATSR 136 +I DA FY EEYHQ+Y++K SR Sbjct 170 GAITTEIIDAPTFYFAEEYHQQYLDKPGSR 199 >ref|NP_001232951.1| uncharacterized protein LOC100164380 [Acyrthosiphon pisum] dbj|BAH71057.1| ACYPI005402 [Acyrthosiphon pisum] Length=231 Score = 104 bits (259), Expect = 5e-26, Method: Compositional matrix adjust. Identities = 55/131 (42%), Positives = 79/131 (60%), Gaps = 6/131 (5%) Query 1 AMGUFWGPQRDFDQTEGIANTVVGYSGSVSRDSTVNPTYRNIRDYAESIRITYNADKLKY 60 +MG FW P F T GI T VGY+G + PTYRNI DY E+I++ Y+ + + Y Sbjct 32 SMGCFWAPDSLFGSTPGIITTRVGYAGGTE---GLIPTYRNIGDYTEAIQLQYDPNTVSY 88 Query 61 EDLLEMFFDMHHPSDSRYGTQYRSAIFVYSEEQKQLAEAAC--KKRGSVGELVKIEDASD 118 +LL+MF+D H P+ +++ QY S I+ ++++QK AE KK + L KIE A Sbjct 89 LELLKMFWDHHDPT-AKFKKQYSSFIYYHNDQQKAEAELTLNEKKAKGLDVLTKIEPAGQ 147 Query 119 FYRGEEYHQKY 129 F+ E+YHQKY Sbjct 148 FFNAEDYHQKY 158 >ref|YP_004671018.1| peptide methionine sulfoxide reductase msrA [Simkania negevensis Z] emb|CCB88527.1| peptide methionine sulfoxide reductase msrA [Simkania negevensis Z] Length=151 Score = 101 bits (252), Expect = 9e-26, Method: Compositional matrix adjust. Identities = 58/144 (40%), Positives = 82/144 (57%), Gaps = 16/144 (11%) Query 1 AMGUFWGPQRDFDQTEGIANTVVGYSGSVSRDSTVNPTYRNIRD----YAESIRITYNAD 56 A G FW Q+ FDQ +G+ +T VGY+G R NPTY + + +AE+I I Y+ Sbjct 7 AAGCFWHVQKVFDQLDGVESTRVGYTGGEVR----NPTYEEVCEGNTGHAEAIEILYDPQ 62 Query 57 KLKYEDLLEMFFDMHHPSDSR-----YGTQYRSAIFVYSEEQKQLAEAACK---KRGSVG 108 K+ YE LL++F+ MH P+ G QYRSAIF +S Q+++AE + K +R + Sbjct 63 KISYESLLKVFWTMHDPTTLNRQGVDIGRQYRSAIFTHSSAQRKIAEKSLKDAQRRFRIP 122 Query 109 ELVKIEDASDFYRGEEYHQKYVEK 132 + +I A FY E YHQKY K Sbjct 123 IVTEITSACPFYEAEAYHQKYFRK 146 >ref|YP_591088.1| methionine sulfoxide reductase A [Candidatus Koribacter versatilis Ellin345] gb|ABF41014.1| peptide methionine sulfoxide reductase [Candidatus Koribacter versatilis Ellin345] Length=156 Score = 100 bits (250), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 58/146 (40%), Positives = 84/146 (58%), Gaps = 18/146 (12%) Query 1 AMGUFWGPQRDFDQTEGIANTVVGYSGSVSRDSTVNPTYRNI----RDYAESIRITYNAD 56 A G FWG + F T G+ T VGY+G T NPTY ++ +AE++ +TY+ Sbjct 7 AAGCFWGVEETFRTTPGVVATAVGYTGG----HTENPTYHDVCTDTTGHAEAVEVTYDPA 62 Query 57 KLKYEDLLEMFFDMHHPSDSR-----YGTQYRSAIFVYSEEQKQLAEA---ACKKRGSVG 108 K+ Y+DLL++F++ H+P+ G QYRSAIF YS EQ+ A A A +K G Sbjct 63 KVSYDDLLKIFWENHNPTQMNRQGPDVGAQYRSAIFFYSPEQEAKARASKEALEKSGRFS 122 Query 109 E--LVKIEDASDFYRGEEYHQKYVEK 132 + + ++ A FYR EEYHQ+Y+ K Sbjct 123 KPIVTQVVPAEPFYRAEEYHQQYLLK 148 >ref|XP_002286093.1| hypothetical protein THAPSDRAFT_30913 [Thalassiosira pseudonana CCMP1335] gb|EED95734.1| hypothetical protein THAPSDRAFT_30913 [Thalassiosira pseudonana CCMP1335] Length=135 Score = 100 bits (248), Expect = 2e-25, Method: Compositional matrix adjust. Identities = 54/136 (40%), Positives = 78/136 (57%), Gaps = 8/136 (6%) Query 5 FWGPQRDFDQTEGIANTVVGYSGSVSRDSTVNPTYRNIRDYAESIRITYNADKLKYEDLL 64 FW PQRDF + EG+ + +VGY+G + NPTY+NI D E+ + ++ + YE++L Sbjct 1 FWHPQRDFKRLEGVVDVIVGYTGGQKK----NPTYQNIMDATEAFIVEFDPSVISYEEIL 56 Query 65 EMFFDMHHPSDSRYGTQYRSAIFVYSEEQKQLAEAACKKRGSVGE---LVKIEDASDFYR 121 + H P QYRSAIF SEEQ+ A+ ++ G G+ V +E S FYR Sbjct 57 NEWAAQHAPFYPS-KCQYRSAIFYCSEEQQSAAQKKIEELGKDGQRSVYVDLEPVSAFYR 115 Query 122 GEEYHQKYVEKATSRR 137 GEEYHQ +++K R Sbjct 116 GEEYHQDFLDKQAGAR 131 >ref|YP_876251.1| peptide methionine sulfoxide reductase [Cenarchaeum symbiosum A] gb|ABK77947.1| peptide methionine sulfoxide reductase [Cenarchaeum symbiosum A] Length=150 Score = 100 bits (248), Expect = 3e-25, Method: Compositional matrix adjust. Identities = 56/146 (38%), Positives = 85/146 (58%), Gaps = 18/146 (12%) Query 1 AMGUFWGPQRDFDQTEGIANTVVGYSGSVSRDSTVNPTYRNI----RDYAESIRITYNAD 56 A G FW + F + EG+ +T VGY+G V NPTY + +AE++++ Y+ D Sbjct 6 AAGCFWHVEEIFRKIEGVQDTAVGYTGGVPE----NPTYEQVCTDGTGHAEAVQVEYDPD 61 Query 57 KLKYEDLLEMFFDMHHPSDSR-----YGTQYRSAIFVYSEEQKQLAEAACKKRGSVGE-- 109 ++ YE LL++F+ H P+ GTQYRSAIF +S EQ++ A+ + +K G G Sbjct 62 RVTYEKLLDVFWGNHDPTTRNRQGPDVGTQYRSAIFFHSTEQEEAAKISKEKLGGSGRFK 121 Query 110 ---LVKIEDASDFYRGEEYHQKYVEK 132 + +I A FYR E+YHQ+Y+EK Sbjct 122 NPIVTEIAGAPAFYRAEDYHQRYLEK 147 >ref|YP_002755462.1| methionine-S-sulfoxide reductase [Acidobacterium capsulatum ATCC 51196] sp|C1F1B8.1|MSRA_ACIC5 RecName: Full=Peptide methionine sulfoxide reductase MsrA; Short=Protein-methionine-S-oxide reductase; AltName: Full=Peptide-methionine (S)-S-oxide reductase; Short=Peptide Met(O) reductase gb|ACO31447.1| methionine-S-sulfoxide reductase [Acidobacterium capsulatum ATCC 51196] Length=156 Score = 100 bits (248), Expect = 5e-25, Method: Compositional matrix adjust. Identities = 54/144 (38%), Positives = 81/144 (56%), Gaps = 18/144 (13%) Query 3 GUFWGPQRDFDQTEGIANTVVGYSGSVSRDSTVNPTYRNI----RDYAESIRITYNADKL 58 G FWG + F Q G+ + GY G NPTYR++ +AE + I +N D++ Sbjct 9 GCFWGVEASFRQLHGVQDVAAGYEGG----KLDNPTYRDVCTDLTGHAEVVEIDFNPDEI 64 Query 59 KYEDLLEMFFDMHHPSD-----SRYGTQYRSAIFVYSEEQKQLAEA-----ACKKRGSVG 108 ++E LLE FF +H P+ +GTQYRS IF +S EQ+ +A+A +KR Sbjct 65 RFEQLLEAFFGLHDPTQLNRQGPDWGTQYRSVIFYHSPEQQTVAQAFIDRLTAEKRFPRP 124 Query 109 ELVKIEDASDFYRGEEYHQKYVEK 132 + ++ A+ F+R EEYHQ+Y+EK Sbjct 125 IVTQVVPAATFWRAEEYHQRYLEK 148 >ref|YP_001733484.1| methionine sulfoxide reductase A [Synechococcus sp. PCC 7002] gb|ACA98228.1| protein-methionine-S-oxide reductase [Synechococcus sp. PCC 7002] Length=219 Score = 101 bits (251), Expect = 7e-25, Method: Compositional matrix adjust. Identities = 56/148 (38%), Positives = 83/148 (56%), Gaps = 20/148 (14%) Query 1 AMGUFWGPQRDFDQTEGIANTVVGYSGSVSRDSTVNPTYRNI----RDYAESIRITYNAD 56 +G FWG +R F QT G+ +T VGY+ T NPTY+ + + E + + Y++ Sbjct 53 GLGCFWGAERKFWQTPGVFSTAVGYAAG----HTPNPTYQEVCSGMTGHNEVVLVAYDST 108 Query 57 KLKYEDLLEMFFDMHHPSDSR-----YGTQYRSAIFVYSEEQKQLAEA-------ACKKR 104 ++ YE LL++F++ H+P+ GTQYRS I+ YSE QKQLA+ A K Sbjct 109 QVSYETLLKVFWESHNPTQGMRQGNDVGTQYRSGIYTYSEAQKQLAQTSLEAYQDALKAE 168 Query 105 GSVGELVKIEDASDFYRGEEYHQKYVEK 132 G +I +A +FY EEYHQ+Y+ K Sbjct 169 GYGAITTEILEAPEFYYAEEYHQQYLAK 196 >ref|YP_003889771.1| peptide methionine sulfoxide reductase [Cyanothece sp. PCC 7822] gb|ADN16496.1| peptide methionine sulfoxide reductase [Cyanothece sp. PCC 7822] Length=220 Score = 101 bits (251), Expect = 7e-25, Method: Compositional matrix adjust. Identities = 53/144 (37%), Positives = 81/144 (56%), Gaps = 12/144 (8%) Query 1 AMGUFWGPQRDFDQTEGIANTVVGYSGSVSRDSTVNPTYRNIRDYAESIRITYNADKLKY 60 +G FWG +R F Q EG+ +T VGY+G + + T + + E + + Y+ + Y Sbjct 53 GLGCFWGAERKFWQLEGVYSTAVGYAGGYTPNPTYEEVCSGLTGHNEVVLVVYDPKIISY 112 Query 61 EDLLEMFFDMHHPSDSR-----YGTQYRSAIFVYSEEQKQLAEAA------CKKRGSVGE 109 E LL++F++ H P+ GTQYRS I+V+SEEQK+LAE+ + G+ Sbjct 113 ETLLKVFWESHDPTQGMRQGNDVGTQYRSGIYVFSEEQKKLAESTRDMYQKALSKAKYGQ 172 Query 110 LV-KIEDASDFYRGEEYHQKYVEK 132 + +I DA DFY E YHQ+Y+ K Sbjct 173 ITSEILDAPDFYYAESYHQQYLAK 196 >ref|XP_002949120.1| peptide methionine-S-sulfoxide reductase [Volvox carteri f. nagariensis] gb|EFJ49613.1| peptide methionine-S-sulfoxide reductase [Volvox carteri f. nagariensis] Length=157 Score = 99.4 bits (246), Expect = 8e-25, Method: Compositional matrix adjust. Identities = 58/143 (41%), Positives = 85/143 (59%), Gaps = 11/143 (8%) Query 1 AMGUFWGPQRDFDQTEGIANTVVGYSGSVSRDSTVNPTYRNI---RDYAESIRITYNADK 57 A+GUFW P+ F + G+ T VGY+G S NPTY ++ + E++RI Y+ Sbjct 14 ALGUFWHPEASFAKLPGVVKTRVGYTGGTSP----NPTYGSVCAGDGHTEALRIWYDPSV 69 Query 58 LKYEDLLEMFFDMHHPSDSRYGTQYRSAIFVYSEEQKQLAEAACKKRGS---VGELVKIE 114 + YE+LL+MFF H P+ R QY+SAI+ ++E Q++ A AA + S V ++ Sbjct 70 VSYEELLKMFFRDHDPTH-RTKCQYKSAIWYHNEVQRRAAAAAMSELESKFRVRLATTLD 128 Query 115 DASDFYRGEEYHQKYVEKATSRR 137 A +Y EEYHQKY+EK+ SRR Sbjct 129 PAGPWYDAEEYHQKYIEKSMSRR 151 >ref|YP_002492479.1| peptide methionine sulfoxide reductase [Anaeromyxobacter dehalogenans 2CP-1] gb|ACL65413.1| peptide methionine sulfoxide reductase [Anaeromyxobacter dehalogenans 2CP-1] Length=213 Score = 100 bits (250), Expect = 8e-25, Method: Compositional matrix adjust. Identities = 56/148 (38%), Positives = 81/148 (55%), Gaps = 20/148 (14%) Query 1 AMGUFWGPQRDFDQTEGIANTVVGYSGSVSRDSTVNPTYRNI----RDYAESIRITYNAD 56 +G FWG +R F + G+ T VGY+G T NPTYR + +AE +R+ ++ Sbjct 49 GLGCFWGAERVFWKLPGVYATAVGYAGG----ETPNPTYREVCTGRTGHAEVVRVVFDPA 104 Query 57 KLKYEDLLEMFFDMHHPSDSR-----YGTQYRSAIFVYSEEQKQLA-------EAACKKR 104 ++ Y DLL++F++ H P+ GTQYRSAI V+ E Q++LA +AA R Sbjct 105 RITYADLLKVFWESHDPTQGMRQGNDVGTQYRSAIHVHGEAQRRLADASREAYQAALAPR 164 Query 105 GSVGELVKIEDASDFYRGEEYHQKYVEK 132 G +I A FY EEYHQ+Y+ K Sbjct 165 GGGAITTEIRAAPPFYYAEEYHQQYLAK 192 >ref|ZP_06967471.1| peptide methionine sulfoxide reductase [Ktedonobacter racemifer DSM 44963] gb|EFH90582.1| peptide methionine sulfoxide reductase [Ktedonobacter racemifer DSM 44963] Length=160 Score = 99.0 bits (245), Expect = 1e-24, Method: Compositional matrix adjust. Identities = 53/144 (37%), Positives = 87/144 (60%), Gaps = 18/144 (13%) Query 3 GUFWGPQRDFDQTEGIANTVVGYSGSVSRDSTVNPTYRNI----RDYAESIRITYNADKL 58 G FWG + F T+G+ +T VGY G S NPTYR++ +AE + + Y+ +++ Sbjct 12 GCFWGVEETFRGTKGVTSTAVGYEGG----SYANPTYRDVCTDQTGHAEVVEVEYDPEQV 67 Query 59 KYEDLLEMFFDMHHPSD-----SRYGTQYRSAIFVYSEEQKQLAEAACKKRGSVGE---- 109 Y+ LL++F++ H+P+ GTQYRSAIF ++ EQ++ AEA+ ++ + G Sbjct 68 PYDQLLQVFWENHNPTTLNRQGPDVGTQYRSAIFYHTPEQQKEAEASKERMQASGHYKRP 127 Query 110 -LVKIEDASDFYRGEEYHQKYVEK 132 + ++ A+ FYR EEYHQ+Y+ K Sbjct 128 IVTQVVPATTFYRAEEYHQRYLAK 151 >ref|ZP_08984375.1| Peptide methionine sulfoxide reductase msrA [Fischerella sp. JSC-11] gb|EHC18601.1| Peptide methionine sulfoxide reductase msrA [Fischerella sp. JSC-11] Length=218 Score = 99.8 bits (247), Expect = 2e-24, Method: Compositional matrix adjust. Identities = 57/148 (39%), Positives = 81/148 (55%), Gaps = 20/148 (14%) Query 1 AMGUFWGPQRDFDQTEGIANTVVGYSGSVSRDSTVNPTYRNI----RDYAESIRITYNAD 56 MG FWG +R F + G+ T VGY+ + T NPTYR + + E + + Y+ Sbjct 53 GMGCFWGAERKFWELSGVYTTAVGYAAGI----TPNPTYREVCTGMTGHNEVVLVVYDPK 108 Query 57 KLKYEDLLEMFFDMHHPSDSR-----YGTQYRSAIFVYSEEQKQLAEA-------ACKKR 104 + Y LL++F++ H P+ GTQYRS I+VYSEEQK+LAEA A K Sbjct 109 VISYTGLLKVFWENHDPTQGMRQGNDVGTQYRSGIYVYSEEQKKLAEASRDTYQEALNKA 168 Query 105 GSVGELVKIEDASDFYRGEEYHQKYVEK 132 G +I +A +FY E+YHQ+Y+ K Sbjct 169 GYGKITTEILNAPEFYYAEDYHQQYLAK 196 >ref|ZP_08465978.1| peptide-methionine (S)-S-oxide reductase [Desmospora sp. 8437] gb|EGK07441.1| peptide-methionine (S)-S-oxide reductase [Desmospora sp. 8437] Length=164 Score = 98.2 bits (243), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 54/144 (38%), Positives = 86/144 (60%), Gaps = 18/144 (13%) Query 3 GUFWGPQRDFDQTEGIANTVVGYSGSVSRDSTVNPTYRNI----RDYAESIRITYNADKL 58 G FWG + F Q +G+ +T VGY G +T NPTY ++ +AE + + Y+ ++ Sbjct 17 GCFWGVEEFFRQMKGVTSTAVGYMGG----TTENPTYEDVCTDRTGHAEVVDLEYDPSQI 72 Query 59 KYEDLLEMFFDMHHPSD-----SRYGTQYRSAIFVYSEEQKQLAEAACKKRGSVGE---- 109 YE+LL +F++ H+P+ GTQYRS IF +S EQK+ AE + ++ + G+ Sbjct 73 TYEELLRVFWENHNPTTLNRQGPDIGTQYRSVIFYHSPEQKEAAEKSKQELAASGKWKDP 132 Query 110 -LVKIEDASDFYRGEEYHQKYVEK 132 + +I A+ FYR EEYHQ+Y++K Sbjct 133 VVTQIVPAAPFYRAEEYHQRYLQK 156 >gb|AET64963.1| Peptide methionine sulfoxide reductase MsrA [Methanosaeta harundinacea 6Ac] Length=182 Score = 98.6 bits (244), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 59/150 (39%), Positives = 85/150 (57%), Gaps = 18/150 (12%) Query 1 AMGUFWGPQRDFDQTEGIANTVVGYSGSVSRDSTVNPTYRNI----RDYAESIRITYNAD 56 A G FWG + F EG+ +T VGY+G ST NPTY + +AE++ + Y+ Sbjct 32 AAGCFWGVEAAFRDLEGVISTAVGYTGG----STTNPTYEEVCTDRTGHAEAVEVVYDPK 87 Query 57 KLKYEDLLEMFFDMHHPSDSR-----YGTQYRSAIFVYSEEQKQLAEAACKKRGSVG--- 108 + +E+LL++F+ +H P+ G+QYRSAIF + EQ+ A A ++ S G Sbjct 88 VVSFEELLDLFWSIHDPTTMNRQGPDVGSQYRSAIFFHDPEQEAEARAKMERLQSSGLYR 147 Query 109 -ELV-KIEDASDFYRGEEYHQKYVEKATSR 136 E+V +I AS FYR EEYHQ+Y EK R Sbjct 148 REIVTEIVPASGFYRAEEYHQQYFEKHGRR 177 >ref|ZP_08427694.1| methionine-S-sulfoxide reductase [Lyngbya majuscula 3L] gb|EGJ33087.1| methionine-S-sulfoxide reductase [Lyngbya majuscula 3L] Length=215 Score = 99.4 bits (246), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 57/148 (39%), Positives = 82/148 (55%), Gaps = 20/148 (14%) Query 1 AMGUFWGPQRDFDQTEGIANTVVGYSGSVSRDSTVNPTYRNI----RDYAESIRITYNAD 56 MG FWG +R F Q EG+ T VGY+ + T NPTY+ + + E + + ++ Sbjct 53 GMGCFWGAERRFWQQEGVFTTAVGYAAGI----TPNPTYQEVCTAMTGHNEVVLVVFDPK 108 Query 57 KLKYEDLLEMFFDMHHPSDSR-----YGTQYRSAIFVYSEEQKQLAEA-------ACKKR 104 + YE LL++F++ H+P+ GTQYRS I+ YSE+QK+LAEA A K Sbjct 109 VISYEALLKVFWESHNPTQGMRQGNDTGTQYRSGIYTYSEDQKKLAEASQNAYQQALKVA 168 Query 105 GSVGELVKIEDASDFYRGEEYHQKYVEK 132 G +I DA +FY E YHQ+Y+ K Sbjct 169 GYGNITTEILDAPEFYYAEGYHQQYLAK 196 >ref|YP_004290627.1| peptide methionine sulfoxide reductase MsrA [Methanobacterium sp. AL-21] gb|ADZ09655.1| Peptide methionine sulfoxide reductase msrA [Methanobacterium sp. AL-21] Length=162 Score = 98.2 bits (243), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 52/142 (37%), Positives = 82/142 (58%), Gaps = 10/142 (7%) Query 1 AMGUFWGPQRDFDQTEGIANTVVGYSGSVSRDSTVNPTYRNIRDYAESIRITYNADKLKY 60 A G FWG + F + +G+ T VGY G ++D N +AE++++ Y+ D++ + Sbjct 13 AAGCFWGVEAAFRELKGVIETTVGYMGGHTKDPNYNEVCTGTTGHAETLQLKYDPDEISF 72 Query 61 EDLLEMFFDMHHPSDSR-----YGTQYRSAIFVYSEEQKQLAEAACKKRGSVGE-----L 110 E LLE+F++ H P+ G QYRS IF ++ EQK+LAE + +K S G+ + Sbjct 73 EKLLEVFWNKHDPTTKNRQGPDIGEQYRSIIFYHNPEQKKLAEESKEKLDSSGKYRNPVV 132 Query 111 VKIEDASDFYRGEEYHQKYVEK 132 +I A FY E+YHQ+Y+EK Sbjct 133 TEIIPAGTFYPAEDYHQQYLEK 154 >gb|EHO69907.1| peptide methionine sulfoxide reductase [Singulisphaera acidiphila DSM 18658] Length=156 Score = 97.8 bits (242), Expect = 3e-24, Method: Compositional matrix adjust. Identities = 54/144 (38%), Positives = 84/144 (58%), Gaps = 18/144 (13%) Query 3 GUFWGPQRDFDQTEGIANTVVGYSGSVSRDSTVNPTYRNI----RDYAESIRITYNADKL 58 G FWG + F Q EG+ + VGY G + NPTY+++ +AE + ++Y+ K+ Sbjct 9 GCFWGVETAFRQVEGVVDAAVGYLGG----TLENPTYQDVCTGTTGHAEVVEVSYDPLKV 64 Query 59 KYEDLLEMFFDMHHPSDSR-----YGTQYRSAIFVYSEEQKQLAEAACKKRGSVGE---- 109 Y+ LL++F+ +H P+ GTQYRSA+F + EEQK+ A A+ ++ G Sbjct 65 SYDQLLDLFWKIHDPTTLNRQGPDVGTQYRSAVFYHDEEQKKAALASRERLRESGRFRRP 124 Query 110 -LVKIEDASDFYRGEEYHQKYVEK 132 + ++ AS FYR EEYHQ+Y+EK Sbjct 125 VVTEVTPASTFYRAEEYHQRYLEK 148 >gb|ABK23082.1| unknown [Picea sitchensis] gb|ABK26828.1| unknown [Picea sitchensis] Length=181 Score = 98.2 bits (243), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 58/147 (39%), Positives = 88/147 (60%), Gaps = 16/147 (11%) Query 1 AMGUFWGPQRDFDQTEGIANTVVGYSGSVSRDSTVNPTYRNI----RDYAESIRITYNAD 56 A G FWG + F + G+ANT VGY S+ + NPTY ++ +AE +R+ Y+ + Sbjct 21 AAGCFWGVELAFQRIHGVANTEVGY----SQGTLHNPTYPDVCTGKTSHAEIVRVQYDPN 76 Query 57 KLKYEDLLEMFFDMHHPS-----DSRYGTQYRSAIFVYSEEQKQLAEAACKK--RGSVGE 109 + YE LL++F+ H P+ + GTQYRS I+ YS EQ++ A+ + +K R + Sbjct 77 QCAYETLLDLFWSRHDPTTLNRQGNDKGTQYRSGIYYYSAEQERAAQESLEKYQRSVPKK 136 Query 110 LV-KIEDASDFYRGEEYHQKYVEKATS 135 +V +I A FYR EEYHQ+Y+EK +S Sbjct 137 IVTEILPAKKFYRAEEYHQQYLEKGSS 163 >ref|ZP_05027190.1| methionine-S-sulfoxide reductase [Microcoleus chthonoplastes PCC 7420] gb|EDX75032.1| methionine-S-sulfoxide reductase [Microcoleus chthonoplastes PCC 7420] Length=220 Score = 99.4 bits (246), Expect = 4e-24, Method: Compositional matrix adjust. Identities = 52/144 (36%), Positives = 80/144 (56%), Gaps = 12/144 (8%) Query 1 AMGUFWGPQRDFDQTEGIANTVVGYSGSVSRDSTVNPTYRNIRDYAESIRITYNADKLKY 60 MG FWG +R F Q EG+ T VGY+G ++ + T + + E +R+ ++ + Y Sbjct 56 GMGCFWGAERRFWQQEGVFVTAVGYAGGITPNPTYQEVCTGMTGHNEVVRVVFDPKVINY 115 Query 61 EDLLEMFFDMHHPSDSR-----YGTQYRSAIFVYSEEQKQLAEA-------ACKKRGSVG 108 + LL++F++ H+P+ GTQYRS I+ YS+ QK+LAEA A + G Sbjct 116 QQLLKVFWESHNPTQGMRQGNDTGTQYRSGIYTYSDSQKKLAEASRDAYQKALSEAGHGE 175 Query 109 ELVKIEDASDFYRGEEYHQKYVEK 132 +I DA +FY E YHQ+Y+ K Sbjct 176 ITTEIVDAPEFYYAEGYHQQYLAK 199 >emb|CBW25365.1| peptide methionine sulfoxide reductase [Bacteriovorax marinus SJ] Length=165 Score = 97.4 bits (241), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 52/146 (36%), Positives = 87/146 (60%), Gaps = 18/146 (12%) Query 1 AMGUFWGPQRDFDQTEGIANTVVGYSGSVSRDSTVNPTYRNIR----DYAESIRITYNAD 56 A G FWG ++ F + EG+ +T VGY+G VNPTY++++ ++AE+I+IT+ Sbjct 12 AGGCFWGMEQLFRELEGVESTDVGYTGG----KLVNPTYKDVKTGETNHAEAIKITFETS 67 Query 57 KLKYEDLLEMFFDMHHPSD-----SRYGTQYRSAIFVYSEEQKQLAEAACKKRGSVGE-- 109 K+ +++L FF +H P+ + G+QYRSAIF+ S+EQ++ A K+ +G Sbjct 68 KISIDEILHFFFKIHDPTTVNRQGNDIGSQYRSAIFIRSDEQREAALKVIKEVEGLGRFN 127 Query 110 ---LVKIEDASDFYRGEEYHQKYVEK 132 + +ED +FY E++HQ Y+ K Sbjct 128 GDVVTTLEDEREFYLAEDFHQDYLLK 153 >ref|YP_002380216.1| methionine sulfoxide reductase A [Cyanothece sp. PCC 7424] gb|ACK73348.1| peptide methionine sulfoxide reductase [Cyanothece sp. PCC 7424] Length=220 Score = 99.0 bits (245), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 51/144 (35%), Positives = 82/144 (57%), Gaps = 12/144 (8%) Query 1 AMGUFWGPQRDFDQTEGIANTVVGYSGSVSRDSTVNPTYRNIRDYAESIRITYNADKLKY 60 +G FWG +R F Q EG+ T VGY+ + + T + + + E + + Y+ + Y Sbjct 53 GLGCFWGAERKFWQLEGVHTTAVGYAAGYTPNPTYDEVCSGLTGHNEVVLVVYDPKVINY 112 Query 61 EDLLEMFFDMHHPSDSR-----YGTQYRSAIFVYSEEQKQLAEAA------CKKRGSVGE 109 E LL++F++ H+P+ GTQYRS I+V+S+EQK+LAE++ + GE Sbjct 113 EALLKVFWESHNPTQGMRQGNDVGTQYRSGIYVFSQEQKKLAESSKEMYQKALNQAKYGE 172 Query 110 L-VKIEDASDFYRGEEYHQKYVEK 132 + +I DA +FY E YHQ+Y+ K Sbjct 173 ITTEIVDAPEFYYAESYHQQYLAK 196 >ref|YP_002931909.1| Peptide methionine-S-oxide reductase, [Edwardsiella ictaluri 93-146] gb|ACR67674.1| Peptide methionine-S-oxide reductase, putative [Edwardsiella ictaluri 93-146] Length=212 Score = 98.6 bits (244), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 57/149 (38%), Positives = 83/149 (56%), Gaps = 21/149 (14%) Query 1 AMGUFWGPQRDFDQTEGIANTVVGYSGSVSRDSTVNPTYRNI----RDYAESIRITYNAD 56 AMG FWG +R F Q GI +T GYSG + T NPTYR + +AE++R+ ++ Sbjct 51 AMGCFWGVERLFWQQPGIYSTAAGYSGGL----TPNPTYREVCSGQTGHAETVRVVFDPS 106 Query 57 KLKYEDLLEMFFDMHHPSDSR-----YGTQYRSAIFVYSEEQKQLAEAA----CKKRGSV 107 ++Y+DLL +F+ H P+ GTQYRSA+F + +Q Q A+A+ + V Sbjct 107 LIRYDDLLRLFWQHHDPAQGMRQGNDVGTQYRSALFPVTSQQMQAAQASHTRFAQAMHQV 166 Query 108 GEL----VKIEDASDFYRGEEYHQKYVEK 132 G+L +I A FY EE HQ+Y+ K Sbjct 167 GDLRPISTEIRAAGPFYYAEEEHQQYLHK 195 >ref|YP_002134344.1| peptide methionine sulfoxide reductase [Anaeromyxobacter sp. K] gb|ACG73215.1| peptide methionine sulfoxide reductase [Anaeromyxobacter sp. K] Length=213 Score = 98.6 bits (244), Expect = 6e-24, Method: Compositional matrix adjust. Identities = 55/147 (37%), Positives = 80/147 (54%), Gaps = 20/147 (14%) Query 2 MGUFWGPQRDFDQTEGIANTVVGYSGSVSRDSTVNPTYRNI----RDYAESIRITYNADK 57 +G FWG +R F + G+ T VGY+G T NPTYR + +AE +R+ ++ + Sbjct 50 LGCFWGAERVFWKLPGVYATAVGYAGG----ETPNPTYREVCTGRTGHAEVVRVVFDPAR 105 Query 58 LKYEDLLEMFFDMHHPSDSR-----YGTQYRSAIFVYSEEQKQLA-------EAACKKRG 105 + Y DLL++F++ H P+ GTQYRSAI + E Q++LA +AA RG Sbjct 106 ITYADLLKVFWESHDPTQGMRQGNDVGTQYRSAIHAHGEAQRRLADASREAYQAALAPRG 165 Query 106 SVGELVKIEDASDFYRGEEYHQKYVEK 132 +I A FY EEYHQ+Y+ K Sbjct 166 RGAITTEIRAAPPFYYAEEYHQQYLAK 192 >ref|YP_003301967.1| peptide methionine sulfoxide reductase [Thermomonospora curvata DSM 43183] gb|ACY99929.1| peptide methionine sulfoxide reductase [Thermomonospora curvata DSM 43183] Length=222 Score = 99.0 bits (245), Expect = 7e-24, Method: Compositional matrix adjust. Identities = 53/145 (37%), Positives = 76/145 (52%), Gaps = 12/145 (8%) Query 1 AMGUFWGPQRDFDQTEGIANTVVGYSGSVSRDSTVNPTYRNIRDYAESIRITYNADKLKY 60 A+G FWG +R F Q G+ T VGY G + + T + +AE++R+ Y+ K+ Y Sbjct 54 ALGCFWGAERTFWQVPGVITTAVGYQGGYTPNPTYEEVCSGLTGHAEAVRVVYDPAKVTY 113 Query 61 EDLLEMFFDMHHPSDSR-----YGTQYRSAIFVYSEEQKQLAEA-------ACKKRGSVG 108 E LL +F++ H P+ GTQYRSAI+ +SE Q++ AEA A G Sbjct 114 ERLLRVFWESHDPTQGMRQGNDIGTQYRSAIYTHSEAQRKAAEASREAYQKALTAAGHGT 173 Query 109 ELVKIEDASDFYRGEEYHQKYVEKA 133 +I A FY E YHQ+Y+ A Sbjct 174 ITTEIAPAGPFYFAEPYHQQYLSDA 198 >ref|YP_001549852.1| peptide methionine sulfoxide reductase [Methanococcus maripaludis C6] sp|A9AB97.1|MSRA_METM6 RecName: Full=Peptide methionine sulfoxide reductase MsrA; Short=Protein-methionine-S-oxide reductase; AltName: Full=Peptide-methionine (S)-S-oxide reductase; Short=Peptide Met(O) reductase gb|ABX02620.1| peptide methionine sulfoxide reductase [Methanococcus maripaludis C6] Length=157 Score = 96.7 bits (239), Expect = 8e-24, Method: Compositional matrix adjust. Identities = 55/143 (38%), Positives = 75/143 (52%), Gaps = 8/143 (6%) Query 1 AMGUFWGPQRDFDQTEGIANTVVGYSGSVSRDSTVNPTYRNIRDYAESIRITYNADKLKY 60 MG FW + F + G+ +T VG+ G ++ T R + E + I YN LKY Sbjct 10 GMGCFWSAEELFRKINGVISTEVGFMGGNIKNPTYGQVCRGRSGHIEVVNIIYNPKILKY 69 Query 61 EDLLEMFFDMHHPSDSR-----YGTQYRSAIFVYSEEQKQLAEAACKKRGSVGEL---VK 112 +DLLE+F++ H P+ G QY S IF ++EEQK LAE + +K EL Sbjct 70 DDLLELFWNNHDPTTPNRQGWDVGEQYSSHIFYFTEEQKLLAEKSFEKIQKNSELKIVTA 129 Query 113 IEDASDFYRGEEYHQKYVEKATS 135 I ASDF+ EEYHQKY K + Sbjct 130 IRKASDFFPAEEYHQKYFMKKNN 152 >ref|YP_001635268.1| peptide methionine sulfoxide reductase [Chloroflexus aurantiacus J-10-fl] ref|YP_002569536.1| peptide methionine sulfoxide reductase [Chloroflexus sp. Y-400-fl] gb|ABY34879.1| peptide methionine sulfoxide reductase [Chloroflexus aurantiacus J-10-fl] gb|ACM53210.1| peptide methionine sulfoxide reductase [Chloroflexus sp. Y-400-fl] Length=181 Score = 97.4 bits (241), Expect = 9e-24, Method: Compositional matrix adjust. Identities = 55/145 (38%), Positives = 85/145 (59%), Gaps = 22/145 (15%) Query 1 AMGUFWGPQRDFDQTEGIANTVVGYSGSVSRDSTVNPTYRNIRD----YAESIRITYNAD 56 A G FW + +DQ G+ + V GY+G NPTYR + D +AE+++I ++ + Sbjct 9 AGGCFWCLEAVYDQVSGVKDVVSGYTGGY----VPNPTYRRVCDGNTGHAEAVQIQFDPE 64 Query 57 KLKYEDLLEMFFDMHHPSD-----SRYGTQYRSAIFVYSEEQKQLAEAACKK-------R 104 ++ Y +LLE+FF +H P+ + GTQYRSAIF +SEEQ+Q+AE ++ R Sbjct 65 QISYRELLEIFFSIHDPTTLNRQGADVGTQYRSAIFYHSEEQRQVAEQLVRELTEQQVFR 124 Query 105 GSVGELVKIEDASDFYRGEEYHQKY 129 + + +I A+ FY EEYHQ+Y Sbjct 125 DPI--VTQIVPATTFYPAEEYHQEY 147 >ref|YP_465100.1| peptide methionine sulfoxide reductase [Anaeromyxobacter dehalogenans 2CP-C] gb|ABC81663.1| peptide methionine sulfoxide reductase [Anaeromyxobacter dehalogenans 2CP-C] Length=213 Score = 98.2 bits (243), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 56/148 (38%), Positives = 83/148 (56%), Gaps = 20/148 (14%) Query 1 AMGUFWGPQRDFDQTEGIANTVVGYSGSVSRDSTVNPTYRNI----RDYAESIRITYNAD 56 +G FWG +R F + G+ T VGY+G V T NPTYR + +AE +R+ ++ Sbjct 49 GLGCFWGAERVFWKLPGVYATAVGYAGGV----TPNPTYREVCTGRTGHAEVVRVVFDPA 104 Query 57 KLKYEDLLEMFFDMHHPSDSR-----YGTQYRSAIFVYSEEQKQLAEAA-------CKKR 104 K+ Y DLL++F++ H P+ GTQYRSA++ + E Q++LAEA+ R Sbjct 105 KISYADLLKVFWESHDPTQGMRQGNDVGTQYRSAVYTHGEAQRRLAEASREAYRAALAAR 164 Query 105 GSVGELVKIEDASDFYRGEEYHQKYVEK 132 G ++ DA FY EEYHQ+Y+ K Sbjct 165 GGGAITTELRDAPPFYYAEEYHQQYLAK 192 >ref|YP_001656745.1| methionine sulfoxide reductase A [Microcystis aeruginosa NIES-843] dbj|BAG01553.1| peptide methionine sulfoxide reductase [Microcystis aeruginosa NIES-843] Length=220 Score = 98.2 bits (243), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 54/148 (36%), Positives = 83/148 (56%), Gaps = 20/148 (14%) Query 1 AMGUFWGPQRDFDQTEGIANTVVGYSGSVSRDSTVNPTYRNI----RDYAESIRITYNAD 56 +G FWG +R F Q EG+ T VGY+ + T NPTY+ + + E + + Y+ Sbjct 53 GLGCFWGAERKFWQLEGVYTTAVGYAAGI----TPNPTYQEVCTGMTGHNEVVLVVYDPS 108 Query 57 KLKYEDLLEMFFDMHHPSDSR-----YGTQYRSAIFVYSEEQKQLAEAA------CKKRG 105 + YE LL++F++ H+P+ GTQYRS I+ YS +QKQLAE + + Sbjct 109 VISYEQLLKVFWESHNPTQGMRQGNDTGTQYRSGIYTYSPQQKQLAEKSRSIYQEALNKA 168 Query 106 SVGEL-VKIEDASDFYRGEEYHQKYVEK 132 + G++ +I DA +FY E YHQ+Y+ K Sbjct 169 NYGQITTEILDAPEFYYAEVYHQQYLAK 196 >ref|YP_003727183.1| peptide methionine sulfoxide reductase [Methanohalobium evestigatum Z-7303] gb|ADI74387.1| peptide methionine sulfoxide reductase [Methanohalobium evestigatum Z-7303] Length=156 Score = 96.3 bits (238), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 58/146 (40%), Positives = 83/146 (57%), Gaps = 18/146 (12%) Query 1 AMGUFWGPQRDFDQTEGIANTVVGYSGSVSRDSTVNPTYRNI----RDYAESIRITYNAD 56 A G FWG + F Q EG+ +T VGY+G NPTY+++ +AE++ +T+ Sbjct 7 AAGCFWGVEAAFRQIEGLLSTRVGYTGGTWE----NPTYKDVCTGKTGHAEAVEVTFEPS 62 Query 57 KLKYEDLLEMFFDMHHPSDSR-----YGTQYRSAIFVYSEEQKQLAEAACKKRGSVGELV 111 + YE LL++F+ +H P+ GTQYRSAIF ++EEQK+ A + K G+ Sbjct 63 IVSYEKLLDVFWKIHDPTTLNRQGPDIGTQYRSAIFYHNEEQKKKAIESRDKLQQSGKYK 122 Query 112 K-----IEDASDFYRGEEYHQKYVEK 132 K I AS+FY EEYHQ+Y EK Sbjct 123 KDIVTDIVPASEFYEAEEYHQRYFEK 148 >ref|YP_004673357.1| bifunctional peptide-methionine (S)-S-oxide reductase/peptide-methionine (R)-S-oxide reductase [Treponema paraluiscuniculi Cuniculi A] gb|AEH40566.1| bifunctional peptide-methionine (S)-S-oxide reductase/peptide-methionine (R)-S-oxide reductase [Treponema paraluiscuniculi Cuniculi A] Length=291 Score = 99.8 bits (247), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 57/146 (39%), Positives = 80/146 (55%), Gaps = 18/146 (12%) Query 1 AMGUFWGPQRDFDQTEGIANTVVGYSGSVSRDSTVNPTYRNI----RDYAESIRITYNAD 56 A G FWG + F + +G+ VGY+G +T +PTYRN+ +AE++ I ++ Sbjct 132 AAGCFWGTEAYFRRVKGVLRVRVGYTGG----TTKSPTYRNVCTGTTGHAEAVEILFDPQ 187 Query 57 KLKYEDLLEMFFDMHHPSDSR-----YGTQYRSAIFVYSEEQKQLAEAACKKRGSVGELV 111 + YEDLL+ FF MH P+ GTQYRSAIF S Q+Q AE + G+ Sbjct 188 VISYEDLLKHFFRMHDPTSLNKQGGDVGTQYRSAIFYLSGTQRQQAETLMGRYAGAGKFT 247 Query 112 K-----IEDASDFYRGEEYHQKYVEK 132 + +E+A DFY EEYHQ Y+ K Sbjct 248 RPLVTTLEEARDFYPAEEYHQDYLTK 273 >ref|YP_003542155.1| peptide methionine sulfoxide reductase [Methanohalophilus mahii DSM 5219] gb|ADE36510.1| peptide methionine sulfoxide reductase [Methanohalophilus mahii DSM 5219] Length=164 Score = 96.7 bits (239), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 53/145 (37%), Positives = 86/145 (59%), Gaps = 17/145 (12%) Query 1 AMGUFWGPQRDFDQTEGIANTVVGYSGSVSRDSTVNPTYRNI----RDYAESIRITYNAD 56 A G FWG + F + EG+ +T VGY+G S NP+Y+ + +AE++ +TY+ Sbjct 12 AAGCFWGVEAAFREVEGVISTQVGYTGG----SMSNPSYKEVCTGRTGHAEAVEVTYDPQ 67 Query 57 KLKYEDLLEMFFDMHHPSDSR-----YGTQYRSAIFVYSEEQKQLAEAACKKRGSVGE-- 109 + YE +L++F+++H P+ GTQYRSAIF + +QK++A + K G+ Sbjct 68 IVSYEQMLDIFWNIHDPTTPNRQGPDIGTQYRSAIFYHDIKQKEIALRSLHKLQESGKFN 127 Query 110 --LVKIEDASDFYRGEEYHQKYVEK 132 + +I+ AS+FY E+YHQ+Y EK Sbjct 128 TIVTEIKPASEFYPAEDYHQQYFEK 152 >emb|CAO88907.1| unnamed protein product [Microcystis aeruginosa PCC 7806] Length=220 Score = 97.8 bits (242), Expect = 1e-23, Method: Compositional matrix adjust. Identities = 51/144 (35%), Positives = 77/144 (53%), Gaps = 12/144 (8%) Query 1 AMGUFWGPQRDFDQTEGIANTVVGYSGSVSRDSTVNPTYRNIRDYAESIRITYNADKLKY 60 +G FWG +R F Q EG+ T VGY+ ++ + T + + E + + Y+ + Y Sbjct 53 GLGCFWGAERKFWQLEGVYTTAVGYAAGITPNPTYQEVCTGMTGHNEVVLVVYDPSVISY 112 Query 61 EDLLEMFFDMHHPSDSR-----YGTQYRSAIFVYSEEQKQLAEA-------ACKKRGSVG 108 E LL++F++ H+P+ GTQYRS I+ Y+ +QKQLAE A K G Sbjct 113 EQLLKVFWESHNPTQGMRQGNDTGTQYRSGIYTYNPQQKQLAEKSRSIYQEALNKAGHGQ 172 Query 109 ELVKIEDASDFYRGEEYHQKYVEK 132 +I DA +FY E YHQ+Y+ K Sbjct 173 ITTEIIDAPEFYYAEVYHQQYLAK 196 >gb|EGB10697.1| selenoprotein, partial [Aureococcus anophagefferens] Length=170 Score = 96.7 bits (239), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 52/135 (39%), Positives = 80/135 (59%), Gaps = 9/135 (7%) Query 1 AMGUFWGPQRDFDQTEGIANTVVGYSGSVSRDSTVNPTYRNIRDYAESIRITYNADKLKY 60 A+GUFW PQ+ FD +G+ + VGY+ +T P Y ++ D+ E++R+ ++ D + Y Sbjct 27 ALGUFWTPQQKFDLRDGVIWSTVGYTSG----TTPAPNYDDLGDHTEALRLEFDEDVVSY 82 Query 61 EDLLEMFFDMHHPSDSRYGTQYRSAIFVYSEEQKQLAEAACKKRGSVGELVK---IEDAS 117 E L+E F+D+H P+ QYRSAIF + E Q++ AE + V+ IE A+ Sbjct 83 EALVEQFWDLHAPNKG--SRQYRSAIFYHDEAQRECAERVQAQLFPSKRYVRDTAIEPAA 140 Query 118 DFYRGEEYHQKYVEK 132 +F+ E YHQKY EK Sbjct 141 EFFPAEAYHQKYREK 155 >ref|YP_004519713.1| peptide methionine sulfoxide reductase MsrA [Methanobacterium sp. SWAN-1] gb|AEG17912.1| Peptide methionine sulfoxide reductase msrA [Methanobacterium sp. SWAN-1] Length=161 Score = 96.3 bits (238), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 56/150 (37%), Positives = 87/150 (58%), Gaps = 18/150 (12%) Query 1 AMGUFWGPQRDFDQTEGIANTVVGYSGSVSRDSTVNPTYRNI----RDYAESIRITYNAD 56 A G FWG + F Q +G+ +T VGY G + NP Y ++ +AES+ +TY+ Sbjct 12 AAGCFWGVEAAFRQLKGVVDTRVGYMGG----NFENPKYGDVCSGRTGHAESVEVTYDPS 67 Query 57 KLKYEDLLEMFFDMHHPSDSR-----YGTQYRSAIFVYSEEQKQLAEAACKKRGSVGE-- 109 + Y++LL++F+++H P+ G QYRS IF ++EEQK+LA+A+ KK G Sbjct 68 IILYDELLDVFWELHDPTTPNRQGPDIGEQYRSVIFYHNEEQKKLADASKKKLQGSGRYK 127 Query 110 ---LVKIEDASDFYRGEEYHQKYVEKATSR 136 + +I AS F+ E+YHQ+Y+EK R Sbjct 128 DDIVTEIVPASKFWTAEKYHQRYLEKRGRR 157 >gb|EGZ22678.1| hypothetical protein PHYSODRAFT_314189 [Phytophthora sojae] Length=168 Score = 96.3 bits (238), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 56/147 (38%), Positives = 86/147 (59%), Gaps = 16/147 (11%) Query 1 AMGUFWGPQRDFDQTEGIANTVVGYSGSVSRDSTVNPTYRNI----RDYAESIRITYNAD 56 A G FW QR FD+ G+ T VGY S+ T +PTYR + ++AESI+I ++ Sbjct 14 AAGCFWAVQRAFDRVPGVVETSVGY----SQGKTDHPTYRTVVTGRTNHAESIKIAFDET 69 Query 57 KLKYEDLLEMFFDMHHPS-----DSRYGTQYRSAIFVYSEEQKQLAEAACKKRGSVGE-- 109 ++ Y+DLL++F+ H P+ + GTQYRS I+ +EEQ + A A+ ++ + Sbjct 70 QVSYDDLLKVFWTTHDPTSLNRQEDDVGTQYRSGIYYQNEEQHKAALASKEEHQKTLDKP 129 Query 110 -LVKIEDASDFYRGEEYHQKYVEKATS 135 + +IE+A F+ EE HQKY+EK S Sbjct 130 IVTEIEEAKQFWDAEEAHQKYLEKGGS 156 >gb|ADI18514.1| peptide methionine sulfoxide reductase [uncultured gamma proteobacterium HF4000_19M20] Length=213 Score = 97.1 bits (240), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 55/148 (37%), Positives = 82/148 (55%), Gaps = 20/148 (14%) Query 1 AMGUFWGPQRDFDQTEGIANTVVGYSGSVSRDSTVNPTYRNI----RDYAESIRITYNAD 56 MG FWG +R F +TEG+ T VGYSG + T+NPTYR + ++E++ I Y+ Sbjct 54 GMGCFWGVERKFWETEGVYTTAVGYSGGI----TMNPTYREVCTGFTGHSEAVLIVYDPK 109 Query 57 KLKYEDLLEMFFDMHHPSDSR-----YGTQYRSAIFVYSEEQKQLA-------EAACKKR 104 K+ Y++LL F++ H P+ GTQYRS I+ +EEQK + + K Sbjct 110 KISYDELLITFWEQHDPTQGMRQGGDVGTQYRSGIYYLNEEQKDSSLKTRKSYQEELNKN 169 Query 105 GSVGELVKIEDASDFYRGEEYHQKYVEK 132 G ++ +A+DFY E YHQ+Y+ K Sbjct 170 GFGSITTEVIEAADFYYAEHYHQQYLAK 197 >ref|YP_001591650.1| methionine sulfoxide reductase A [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] sp|A9N540.1|MSRA_SALPB RecName: Full=Peptide methionine sulfoxide reductase MsrA; Short=Protein-methionine-S-oxide reductase; AltName: Full=Peptide-methionine (S)-S-oxide reductase; Short=Peptide Met(O) reductase gb|ABX70817.1| hypothetical protein SPAB_05548 [Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7] gb|EHJ79484.1| Peptide methionine sulfoxide reductase MsrA [Salmonella enterica subsp. enterica serovar Baildon str. R6-199] Length=212 Score = 97.1 bits (240), Expect = 2e-23, Method: Compositional matrix adjust. Identities = 55/149 (37%), Positives = 83/149 (56%), Gaps = 21/149 (14%) Query 1 AMGUFWGPQRDFDQTEGIANTVVGYSGSVSRDSTVNPTYRNI----RDYAESIRITYNAD 56 AMG FWG +R F Q G+ +T GY+G T NPTYR + +AE++RI Y+ Sbjct 49 AMGCFWGVERLFWQLPGVYSTAAGYAGGY----TPNPTYREVCSGQTGHAEAVRIVYDPA 104 Query 57 KLKYEDLLEMFFDMHHPSDSR-----YGTQYRSAIFVYSEEQKQLAEAACKK----RGSV 107 + YE LL++F++ H P+ +GTQYRSAI+ + EQ A A+C++ + Sbjct 105 VISYEQLLQIFWENHDPTQGMQQGNDHGTQYRSAIYPLTPEQNAAAHASCERFQSAMAAA 164 Query 108 GE----LVKIEDASDFYRGEEYHQKYVEK 132 G+ +I A+ FY E+ HQ+Y+ K Sbjct 165 GDHRPITTEIAHATPFYYAEDEHQQYLHK 193 >ref|YP_001666611.1| methionine sulfoxide reductase A [Pseudomonas putida GB-1] sp|B0KJ25.1|MSRA_PSEPG RecName: Full=Peptide methionine sulfoxide reductase MsrA; Short=Protein-methionine-S-oxide reductase; AltName: Full=Peptide-methionine (S)-S-oxide reductase; Short=Peptide Met(O) reductase gb|ABY96275.1| peptide methionine sulfoxide reductase [Pseudomonas putida GB-1] Length=222 Score = 97.1 bits (240), Expect = 3e-23, Method: Compositional matrix adjust. Identities = 52/144 (36%), Positives = 79/144 (55%), Gaps = 12/144 (8%) Query 1 AMGUFWGPQRDFDQTEGIANTVVGYSGSVSRDSTVNPTYRNIRDYAESIRITYNADKLKY 60 +G FWG +R F Q EG+ +TVVGY+G + T + + E + + ++ DK+ Y Sbjct 57 GLGCFWGAERRFWQREGVVSTVVGYAGGFTPHPTYEEVCSGLTGHTEVVLVVFDKDKVSY 116 Query 61 EDLLEMFFDMHHPSDSR-----YGTQYRSAIFVYSEEQKQLAEA------ACKKRGSVGE 109 +LL MF+++H+P+ GTQYRSAI+ S EQ + AEA A + GE Sbjct 117 RELLAMFWELHNPTQGMRQGNDVGTQYRSAIYCTSPEQLEQAEASRDAFQAELSKAGFGE 176 Query 110 L-VKIEDASDFYRGEEYHQKYVEK 132 + +I+ A Y E YHQ+Y+ K Sbjct 177 ITTEIDQAPTVYFAEAYHQQYLAK 200 >ref|ZP_09247552.1| methionine-S-sulfoxide reductase [Acaryochloris sp. CCMEE 5410] Length=218 Score = 96.7 bits (239), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 53/148 (36%), Positives = 86/148 (58%), Gaps = 20/148 (14%) Query 1 AMGUFWGPQRDFDQTEGIANTVVGYSGSVSRDSTVNPTYRNI----RDYAESIRITYNAD 56 +G FWG +R F Q EG+ T VGY+ V T NPTY+ + + E + + ++ Sbjct 54 GLGCFWGAERRFWQQEGVYVTAVGYASGV----TPNPTYQEVCSGMTGHNEVVMVIFDPS 109 Query 57 KLKYEDLLEMFFDMHHPSDSR-----YGTQYRSAIFVYSEEQKQLAEAACK------KRG 105 K+ Y+ LL++F++ H+P+ GTQYRS ++ YS++QK LA ++ K KR Sbjct 110 KISYKSLLQVFWESHNPTQGMQQGNDVGTQYRSGVYTYSDQQKALALSSKKIYQDALKRA 169 Query 106 SVGEL-VKIEDASDFYRGEEYHQKYVEK 132 + E+ ++ DA +FY E+YHQ+Y+ K Sbjct 170 GLSEITTEVLDAPEFYYAEDYHQQYLAK 197 >gb|ABK24273.1| unknown [Picea sitchensis] Length=181 Score = 95.9 bits (237), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 57/147 (39%), Positives = 87/147 (59%), Gaps = 16/147 (11%) Query 1 AMGUFWGPQRDFDQTEGIANTVVGYSGSVSRDSTVNPTYRNI----RDYAESIRITYNAD 56 A G FWG + F + G+ANT VGY S+ + NPTY ++ +AE + + Y+ + Sbjct 21 AAGCFWGVELAFQRIHGVANTEVGY----SQGTLHNPTYPDVCTGKTSHAEIVMVQYDPN 76 Query 57 KLKYEDLLEMFFDMHHPS-----DSRYGTQYRSAIFVYSEEQKQLAEAACKK--RGSVGE 109 + YE LL++F+ H P+ + GTQYRS I+ YS EQ++ A+ + +K R + Sbjct 77 QCAYETLLDLFWSRHDPTTLNRQGNDKGTQYRSGIYYYSAEQERAAQESLEKYQRSVPKK 136 Query 110 LV-KIEDASDFYRGEEYHQKYVEKATS 135 +V +I A FYR EEYHQ+Y+EK +S Sbjct 137 IVTEILPAKKFYRAEEYHQQYLEKGSS 163 >emb|CAJ72127.1| strongly similar to peptide methionine sulfoxide reductase [Candidatus Kuenenia stuttgartiensis] Length=239 Score = 97.4 bits (241), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 57/142 (40%), Positives = 80/142 (56%), Gaps = 10/142 (7%) Query 1 AMGUFWGPQRDFDQTEGIANTVVGYSGSVSRDSTVNPTYRNIRDYAESIRITYNADKLKY 60 A G FW Q+ FDQ EG+ +T VGY+G + Y +AE+I I Y+ + Y Sbjct 71 AGGCFWCMQQPFDQLEGVISTAVGYTGGNVENPAYEDVYSGRTGHAEAIEIWYDPSLISY 130 Query 61 EDLLEMFFDMHHPSD-----SRYGTQYRSAIFVYSEEQKQLAEAACKKRGSVGELVK--- 112 LL++F+ P+ + G+QYR+AIF ++EEQK LAE++ K+ G+ K Sbjct 131 ASLLQVFWRNIDPTAMNRQFADVGSQYRTAIFYHTEEQKNLAESSKKELEKSGKFNKPIV 190 Query 113 --IEDASDFYRGEEYHQKYVEK 132 I AS FY+ EEYHQKY EK Sbjct 191 TEIVPASAFYKAEEYHQKYYEK 212 >ref|ZP_01264649.1| Peptide methionine sulfoxide reductase [Candidatus Pelagibacter ubique HTCC1002] gb|EAS85136.1| Peptide methionine sulfoxide reductase [Candidatus Pelagibacter ubique HTCC1002] Length=147 Score = 94.7 bits (234), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 49/140 (35%), Positives = 78/140 (56%), Gaps = 8/140 (6%) Query 1 AMGUFWGPQRDFDQTEGIANTVVGYSGSVSRDSTVNPTYRNIRDYAESIRITYNADKLKY 60 +G FWGP+ F + EG+ T VGY G S+ T ++AE +++ ++ + Y Sbjct 7 GLGCFWGPEIKFSKLEGVIKTEVGYCGGDSKTVTYKEVCTGNTNHAEVVKLDFDPKIISY 66 Query 61 EDLLEMFFDMHHPSDSR-----YGTQYRSAIFVYSEEQKQLAEAACKK---RGSVGELVK 112 E +L+ FF++H P+ +GTQYRS IF S+ QK++AE+ KK + S + K Sbjct 67 EKILDFFFEIHDPTTLNSQGPDFGTQYRSEIFYLSDRQKEIAESVIKKVNLKLSGNVVTK 126 Query 113 IEDASDFYRGEEYHQKYVEK 132 ++ EEYHQ+Y+EK Sbjct 127 SSLLKNYCPAEEYHQRYLEK 146 >ref|YP_476496.1| methionine-S-sulfoxide reductase [Synechococcus sp. JA-2-3B'a(2-13)] gb|ABD01233.1| methionine-S-sulfoxide reductase [Synechococcus sp. JA-2-3B'a(2-13)] Length=222 Score = 96.7 bits (239), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 51/144 (35%), Positives = 77/144 (53%), Gaps = 12/144 (8%) Query 1 AMGUFWGPQRDFDQTEGIANTVVGYSGSVSRDSTVNPTYRNIRDYAESIRITYNADKLKY 60 MG FWG +R F Q G+ +T VGY+G + + T + + E +R+ Y+ ++ Y Sbjct 56 GMGCFWGAERKFWQVPGVFSTAVGYAGGFTPNPTYEEVCTGLTGHNEVVRVVYDPAQVSY 115 Query 61 EDLLEMFFDMHHPSDSR-----YGTQYRSAIFVYSEEQKQLAEA-------ACKKRGSVG 108 LL++F++ H P+ GTQYRS I+VYS Q++LAE A G Sbjct 116 AQLLKVFWENHDPTQGMRQGNDVGTQYRSGIYVYSPAQRELAEKTRDLYQQALTAHGYGQ 175 Query 109 ELVKIEDASDFYRGEEYHQKYVEK 132 +I DA +FY E+YHQ+Y+ K Sbjct 176 ITTEILDAPEFYYAEDYHQQYLAK 199 >ref|NP_925462.1| methionine sulfoxide reductase A [Gloeobacter violaceus PCC 7421] dbj|BAC90457.1| protein-methionine-S-oxide reductase [Gloeobacter violaceus PCC 7421] Length=221 Score = 96.7 bits (239), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 56/148 (38%), Positives = 83/148 (56%), Gaps = 20/148 (14%) Query 1 AMGUFWGPQRDFDQTEGIANTVVGYSGSVSRDSTVNPTYRNI----RDYAESIRITYNAD 56 MG FWG +R F Q EG+ T VGY+ + T NPTYR + + E + + ++ Sbjct 51 GMGCFWGAERVFWQAEGVYTTAVGYAAGL----TPNPTYREVCSGMTGHNEVVLVVFDPR 106 Query 57 KLKYEDLLEMFFDMHHPSDSR-----YGTQYRSAIFVYSEEQKQLAE---AACKKRGSVG 108 + YE LL++F++ H P+ GTQYRS I+ + EQKQ+AE AA ++R + Sbjct 107 VISYERLLQIFWENHDPTQGMRQGNDAGTQYRSGIYCSTPEQKQIAEASRAAYQQRLTAA 166 Query 109 ELVKIE----DASDFYRGEEYHQKYVEK 132 L +I DA +FY E+YHQ+Y+ K Sbjct 167 GLGRITTEVLDAPEFYYAEDYHQQYLSK 194 >ref|NP_485715.1| unnamed protein product [Nostoc sp. PCC 7120] sp|Q8YWD8.1|MSRA2_NOSS1 RecName: Full=Peptide methionine sulfoxide reductase MsrA 2; Short=Protein-methionine-S-oxide reductase 2; AltName: Full=Peptide-methionine (S)-S-oxide reductase 2; Short=Peptide Met(O) reductase 2 dbj|BAB78041.1| protein-methionine-S-oxide reductase [Nostoc sp. PCC 7120] Length=222 Score = 96.7 bits (239), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 51/144 (35%), Positives = 78/144 (54%), Gaps = 12/144 (8%) Query 1 AMGUFWGPQRDFDQTEGIANTVVGYSGSVSRDSTVNPTYRNIRDYAESIRITYNADKLKY 60 +G FWG +R F Q +G+ +T VGY+ + + T + + + E + + ++ + Y Sbjct 53 GLGCFWGAERKFWQQQGVYSTAVGYAAGFTPNPTYDEVCTGLTGHNEVVLVVFDPKVISY 112 Query 61 EDLLEMFFDMHHPSDSR-----YGTQYRSAIFVYSEEQKQLAEA-------ACKKRGSVG 108 LL++F++ H+P+ GTQYRS I+VYSE QKQLAEA A G Sbjct 113 TQLLKVFWESHNPTQGMRQGNDVGTQYRSGIYVYSEAQKQLAEASRDAYQQALSSAGYEK 172 Query 109 ELVKIEDASDFYRGEEYHQKYVEK 132 +I DA +FY E YHQ+Y+ K Sbjct 173 ITTEILDAPEFYYAEAYHQQYLAK 196 >gb|ADD72739.1| peptide methionine sulfoxide reductase MsrB/msrA [Treponema pallidum subsp. pallidum str. Chicago] Length=291 Score = 98.2 bits (243), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 57/146 (39%), Positives = 79/146 (54%), Gaps = 18/146 (12%) Query 1 AMGUFWGPQRDFDQTEGIANTVVGYSGSVSRDSTVNPTYRNI----RDYAESIRITYNAD 56 A G FW + F + +G+ VGY+G +T +PTYRN+ +AE++ I ++ Sbjct 132 AAGCFWSTEAYFRRVKGVLRVRVGYTGG----TTKSPTYRNVCTGTTGHAEAVEILFDPQ 187 Query 57 KLKYEDLLEMFFDMHHPSDSR-----YGTQYRSAIFVYSEEQKQLAEAACKKRGSVGELV 111 + YEDLL+ FF MH P+ GTQYRSAIF S QKQ AE + G+ Sbjct 188 VISYEDLLKHFFRMHDPTSLNKQGGDVGTQYRSAIFYLSGTQKQQAETLMGRYAGAGKFT 247 Query 112 K-----IEDASDFYRGEEYHQKYVEK 132 + +E+A DFY EEYHQ Y+ K Sbjct 248 RPLVTTLEEARDFYPAEEYHQDYLTK 273 >ref|YP_344070.1| methionine sulfoxide reductase A [Nitrosococcus oceani ATCC 19707] ref|ZP_05046655.1| methionine-S-sulfoxide reductase [Nitrosococcus oceani AFC27] gb|ABA58540.1| Protein-methionine-S-oxide reductase [Nitrosococcus oceani ATCC 19707] gb|EDZ66751.1| methionine-S-sulfoxide reductase [Nitrosococcus oceani AFC27] Length=219 Score = 96.7 bits (239), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 54/148 (36%), Positives = 79/148 (53%), Gaps = 20/148 (14%) Query 1 AMGUFWGPQRDFDQTEGIANTVVGYSGSVSRDSTVNPTYRNI----RDYAESIRITYNAD 56 MG FWG +R F QTEG+ + VGY+G T NPTY + + E++R+ Y+ Sbjct 51 GMGCFWGAERKFWQTEGVYTSAVGYAGG----HTPNPTYEQVCTGMTGHTEAVRVVYDPK 106 Query 57 KLKYEDLLEMFFDMHHPSDSR-----YGTQYRSAIFVYSEEQKQLAEAA-------CKKR 104 + Y LL++F++ H P+ GTQYRSAI+ Y+ QK AEA+ ++ Sbjct 107 IISYPSLLKIFWESHDPTQGMRQGNDVGTQYRSAIYTYNNAQKTAAEASRKNYEKNLQEA 166 Query 105 GSVGELVKIEDASDFYRGEEYHQKYVEK 132 G +I A +FY E YHQ+Y+ K Sbjct 167 GYAPITTEIGPAPEFYYAESYHQQYLAK 194 >ref|YP_001097623.1| peptide methionine sulfoxide reductase [Methanococcus maripaludis C5] sp|A4FYX5.1|MSRA_METM5 RecName: Full=Peptide methionine sulfoxide reductase MsrA; Short=Protein-methionine-S-oxide reductase; AltName: Full=Peptide-methionine (S)-S-oxide reductase; Short=Peptide Met(O) reductase gb|ABO35409.1| peptide methionine sulfoxide reductase [Methanococcus maripaludis C5] Length=157 Score = 95.1 bits (235), Expect = 4e-23, Method: Compositional matrix adjust. Identities = 52/140 (37%), Positives = 75/140 (54%), Gaps = 8/140 (6%) Query 1 AMGUFWGPQRDFDQTEGIANTVVGYSGSVSRDSTVNPTYRNIRDYAESIRITYNADKLKY 60 MG FW + F + +G+ +T VG+ G ++ T R + E + ITYN +KY Sbjct 10 GMGCFWSAEELFRKIKGVISTEVGFMGGTVKNPTYGQVCRGKSGHIEVVNITYNPKIVKY 69 Query 61 EDLLEMFFDMHHPSDSR-----YGTQYRSAIFVYSEEQKQLAEAACKKRGSVGEL---VK 112 DLL +F++ H P+ G QY S IF ++EEQ+ LAE + +K +L Sbjct 70 TDLLNLFWNNHDPTTPNRQGWDVGEQYSSHIFYFTEEQRLLAEKSFEKIQKSSDLRIVTA 129 Query 113 IEDASDFYRGEEYHQKYVEK 132 I+ ASDF+ EEYHQKY K Sbjct 130 IKKASDFFPAEEYHQKYFMK 149 >ref|NP_219071.1| bifunctional methionine sulfoxide reductase B/A protein [Treponema pallidum subsp. pallidum str. Nichols] ref|YP_001933631.1| bifunctional methionine sulfoxide reductase B/A protein [Treponema pallidum subsp. pallidum SS14] sp|O83641.1|MSRAB_TREPA RecName: Full=Peptide methionine sulfoxide reductase MsrB/MsrA; Includes: RecName: Full=Peptide methionine sulfoxide reductase MsrB; AltName: Full=Peptide-methionine (R)-S-oxide reductase; Includes: RecName: Full=Peptide methionine sulfoxide reductase MsrA; Short=Protein-methionine-S-oxide reductase; AltName: Full=Peptide-methionine (S)-S-oxide reductase; Short=Peptide Met(O) reductase gb|AAC65608.1| protein-methionine-S-oxide reductase (msrA) [Treponema pallidum subsp. pallidum str. Nichols] gb|ACD71052.1| protein-methionine-S-oxide reductase [Treponema pallidum subsp. pallidum SS14] Length=291 Score = 98.2 bits (243), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 57/146 (39%), Positives = 79/146 (54%), Gaps = 18/146 (12%) Query 1 AMGUFWGPQRDFDQTEGIANTVVGYSGSVSRDSTVNPTYRNI----RDYAESIRITYNAD 56 A G FW + F + +G+ VGY+G +T +PTYRN+ +AE++ I ++ Sbjct 132 AAGCFWSTEAYFRRVKGVLRVRVGYTGG----TTKSPTYRNVCTGTTGHAEAVEILFDPQ 187 Query 57 KLKYEDLLEMFFDMHHPSDSR-----YGTQYRSAIFVYSEEQKQLAEAACKKRGSVGELV 111 + YEDLL+ FF MH P+ GTQYRSAIF S QKQ AE + G+ Sbjct 188 VISYEDLLKHFFRMHDPTSLNKQGGDVGTQYRSAIFYLSGTQKQQAETLMGRYAGAGKFT 247 Query 112 K-----IEDASDFYRGEEYHQKYVEK 132 + +E+A DFY EEYHQ Y+ K Sbjct 248 RPLVTTLEEARDFYPAEEYHQDYLTK 273 >gb|ADI23397.1| peptide methionine sulfoxide reductase [uncultured gamma proteobacterium HF0770_28K04] Length=152 Score = 94.7 bits (234), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 55/147 (37%), Positives = 87/147 (59%), Gaps = 20/147 (14%) Query 3 GUFWGPQRDFDQTEGIANTVVGYSGSVSRDSTVNPTYRNI----RDYAESIRITYNADKL 58 G FW + F +T+G+ +T VGYSG + + NPTY ++ +AES+++ Y+ +++ Sbjct 8 GCFWHVEEIFRKTKGVKSTQVGYSGGMKQ----NPTYEDVCTDTTGHAESVQVDYDPEEI 63 Query 59 KYEDLLEMFFDMHHPSDSR-----YGTQYRSAIFVYSEEQKQLAEAACKKRGSV------ 107 YE LL++F+D H+P+ GTQYRS IF ++ EQ+++A K V Sbjct 64 PYEVLLKIFWDNHNPTTPNRQGPDIGTQYRSVIFFHTPEQEKVALEMKTKLNPVAREKFN 123 Query 108 GELV-KIEDASDFYRGEEYHQKYVEKA 133 E+V +I+ A FYR EEYHQ+Y K+ Sbjct 124 AEIVTEIKPAEKFYRAEEYHQQYFAKS 150 >ref|YP_001299299.1| peptide methionine sulfoxide reductase [Bacteroides vulgatus ATCC 8482] ref|ZP_07998169.1| peptide methionine sulfoxide reductase [Bacteroides sp. 3_1_40A] ref|ZP_08797883.1| peptide-methionine (S)-S-oxide reductase [Bacteroides sp. 4_3_47FAA] gb|ABR39677.1| peptide methionine sulfoxide reductase [Bacteroides vulgatus ATCC 8482] gb|EFV65770.1| peptide methionine sulfoxide reductase [Bacteroides sp. 3_1_40A] gb|EET16132.2| peptide-methionine (S)-S-oxide reductase [Bacteroides sp. 4_3_47FAA] Length=161 Score = 94.7 bits (234), Expect = 5e-23, Method: Compositional matrix adjust. Identities = 55/143 (38%), Positives = 77/143 (54%), Gaps = 15/143 (10%) Query 1 AMGUFWGPQRDFDQTEGIANTVVGYSGSVSRDSTVNPTYRNIR----DYAESIRITYNAD 56 A G FWG Q F++ G+ NT VGY+G NPTY ++ + E+I + Y+AD Sbjct 9 AAGCFWGVQHQFERIPGVLNTTVGYTGG----PEANPTYTQVKAHMTHHVEAIFVDYDAD 64 Query 57 KLKYEDLLEMFFDMHHPSDS-----RYGTQYRSAIFVYSEEQKQLAEAACKKRGSVGELV 111 + Y DL ++FF++H PS + G QYRS IF E+QK AE + S G V Sbjct 65 MVSYVDLCKLFFEIHDPSQTDGIGPDLGPQYRSMIFYMDEKQKSEAEEVIELLRSKGHRV 124 Query 112 --KIEDASDFYRGEEYHQKYVEK 132 K+ A F+ E+YHQ Y +K Sbjct 125 NTKLRPAEKFWEAEDYHQHYYDK 147 >ref|YP_004665205.1| methionine-S-sulfoxide reductase [Myxococcus fulvus HW-1] gb|AEI64127.1| methionine-S-sulfoxide reductase [Myxococcus fulvus HW-1] Length=218 Score = 96.3 bits (238), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 55/148 (37%), Positives = 81/148 (55%), Gaps = 20/148 (14%) Query 1 AMGUFWGPQRDFDQTEGIANTVVGYSGSVSRDSTVNPTYRNI----RDYAESIRITYNAD 56 +G FWG +R F QT G+ +T VGY+G + T NPTYR + + E +R+ ++ Sbjct 52 GLGCFWGAERKFYQTPGVYSTAVGYAGGL----TPNPTYREVCSGLTGHNEVVRVVFDPK 107 Query 57 KLKYEDLLEMFFDMHHPSDSR-----YGTQYRSAIFVYSEEQKQLAEA-------ACKKR 104 K+ +E LL +F++ H P+ GTQYRS I+ SE Q++ AEA A R Sbjct 108 KVSFEALLRVFWESHDPTQGMRQGNDVGTQYRSGIYYTSEAQQRAAEASRDAYQKALAAR 167 Query 105 GSVGELVKIEDASDFYRGEEYHQKYVEK 132 G ++ A FY E+YHQ+Y+EK Sbjct 168 GFDSITTELLQAPPFYYAEDYHQQYLEK 195 >ref|YP_004181597.1| peptide methionine sulfoxide reductase [Terriglobus saanensis SP1PR4] gb|ADV81603.1| peptide methionine sulfoxide reductase [Terriglobus saanensis SP1PR4] Length=158 Score = 94.7 bits (234), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 51/144 (35%), Positives = 80/144 (56%), Gaps = 18/144 (13%) Query 3 GUFWGPQRDFDQTEGIANTVVGYSGSVSRDSTVNPTYRNI----RDYAESIRITYNADKL 58 G FWG + F + G+ T VGY G PTY+++ +AE + +TY+ ++ Sbjct 11 GCFWGVEAKFQELPGVLETAVGYEGG----ELERPTYKDVCTDTTGHAEVVEVTYDPTRV 66 Query 59 KYEDLLEMFFDMHHPSDSR-----YGTQYRSAIFVYSEEQKQLAEAACKKRGSVGE---- 109 +E LL+ FF +H P+ +GTQYRSAIF ++E Q + A + ++ + G Sbjct 67 TFETLLDTFFLLHDPTQLNRQGPDWGTQYRSAIFAHNEAQAEEARSKIRELNAEGVYRQP 126 Query 110 -LVKIEDASDFYRGEEYHQKYVEK 132 K+E+A F+R EEYHQ+Y+EK Sbjct 127 IATKVEEAQTFWRAEEYHQRYLEK 150 >ref|XP_002179840.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] gb|EEC48826.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1] Length=137 Score = 94.0 bits (232), Expect = 6e-23, Method: Compositional matrix adjust. Identities = 55/139 (40%), Positives = 76/139 (55%), Gaps = 13/139 (9%) Query 5 FWGPQRDFDQTEGIANTVVGYSGSVSRDSTVNPTYRNIRDYAESIRITYNADKLKYEDLL 64 FW PQ + G+A VVGYSG D PTY+ I+D+ E++ I YN D + YE +L Sbjct 1 FWHPQLQWSTEPGVARCVVGYSGGNEPD----PTYQTIKDHTEAVLIEYNPDMISYEKIL 56 Query 65 EMF-FDMHHPSDSRYGTQYRSAIFVYSEEQKQ-----LAEAACKKRGSVGELVKIEDASD 118 ++ D + R QYRS +F +EEQ + + + + K G V IE + Sbjct 57 KLAKADYPYSPQKR---QYRSGVFYLTEEQAKSAKEFVGKLSAKHSGERKLYVDIEPVTK 113 Query 119 FYRGEEYHQKYVEKATSRR 137 FYRGEEYHQ ++EK TS R Sbjct 114 FYRGEEYHQFFLEKQTSNR 132 >ref|ZP_08139092.1| methionine sulfoxide reductase A [Pseudomonas sp. TJI-51] gb|EGB99622.1| methionine sulfoxide reductase A [Pseudomonas sp. TJI-51] Length=218 Score = 96.3 bits (238), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 51/144 (35%), Positives = 80/144 (56%), Gaps = 12/144 (8%) Query 1 AMGUFWGPQRDFDQTEGIANTVVGYSGSVSRDSTVNPTYRNIRDYAESIRITYNADKLKY 60 +G FWG +R F Q EG+ +TVVGY+G + + T + + E + + ++ DK+ Y Sbjct 57 GLGCFWGAERRFWQREGVVSTVVGYAGGFTPNPTYEEVCSGLTGHTEVVLVVFDKDKVSY 116 Query 61 EDLLEMFFDMHHPSDSR-----YGTQYRSAIFVYSEEQKQLAEA------ACKKRGSVGE 109 +LL MF+++H+P+ GTQYRSAI+ S EQ + A+A A + GE Sbjct 117 RELLAMFWELHNPTQGMRQGNDVGTQYRSAIYCTSPEQLEQAKASRDAFQAELNKAGFGE 176 Query 110 L-VKIEDASDFYRGEEYHQKYVEK 132 + +I+ A Y E YHQ+Y+ K Sbjct 177 ITTEIDQAPTVYFAEAYHQQYLAK 200 >ref|ZP_03273701.1| peptide methionine sulfoxide reductase [Arthrospira maxima CS-328] gb|EDZ94655.1| peptide methionine sulfoxide reductase [Arthrospira maxima CS-328] Length=219 Score = 96.3 bits (238), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 50/144 (35%), Positives = 82/144 (57%), Gaps = 12/144 (8%) Query 1 AMGUFWGPQRDFDQTEGIANTVVGYSGSVSRDSTVNPTYRNIRDYAESIRITYNADKLKY 60 +G FWG +R F Q +G+ +T VGY+G +++ T + + E + + ++ + Y Sbjct 53 GLGCFWGAERKFWQQQGVFSTAVGYAGGYTKNPTYEEVCSGMTGHTEVVLVVFDPKVISY 112 Query 61 EDLLEMFFDMHHPSDSR-----YGTQYRSAIFVYSEEQKQLAEAA------CKKRGSVGE 109 DLL++F++ H+P+ GTQYRSAI+ YS+EQ++LA A+ S GE Sbjct 113 TDLLKLFWESHNPTQGMRQGNDTGTQYRSAIYTYSDEQQRLALASRDRYQQALSAASYGE 172 Query 110 L-VKIEDASDFYRGEEYHQKYVEK 132 + +I A +FY E YHQ+Y+ K Sbjct 173 ITTEIAPAQEFYYAEAYHQQYLGK 196 >ref|YP_001517118.1| msrA gene product [Acaryochloris marina MBIC11017] gb|ABW27802.1| methionine-S-sulfoxide reductase, putative [Acaryochloris marina MBIC11017] Length=218 Score = 95.9 bits (237), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 52/148 (35%), Positives = 83/148 (56%), Gaps = 20/148 (14%) Query 1 AMGUFWGPQRDFDQTEGIANTVVGYSGSVSRDSTVNPTYRNI----RDYAESIRITYNAD 56 +G FWG +R F Q EG+ T VGY+ + T NPTY+ + + E + + ++ Sbjct 54 GLGCFWGAERRFWQQEGVYVTAVGYASGI----TPNPTYQEVCSGMTGHNEVVMVIFDPS 109 Query 57 KLKYEDLLEMFFDMHHPSDSR-----YGTQYRSAIFVYSEEQKQLA-------EAACKKR 104 K+ YE LL++F++ H+P+ GTQYRS ++ YS++QK LA + A +K Sbjct 110 KISYESLLQVFWESHNPTQGMQQGNDVGTQYRSGVYTYSDQQKALALSSKKIYQDALQKA 169 Query 105 GSVGELVKIEDASDFYRGEEYHQKYVEK 132 G ++ DA +FY E+YHQ+Y+ K Sbjct 170 GLSEITTEVLDAPEFYYAEDYHQQYLAK 197 >ref|YP_265612.1| msrB gene product [Candidatus Pelagibacter ubique HTCC1062] sp|Q4FP80.1|MSRA_PELUB RecName: Full=Peptide methionine sulfoxide reductase MsrA; Short=Protein-methionine-S-oxide reductase; AltName: Full=Peptide-methionine (S)-S-oxide reductase; Short=Peptide Met(O) reductase gb|AAZ21009.1| Peptide methionine sulfoxide reductase [Candidatus Pelagibacter ubique HTCC1062] Length=147 Score = 94.0 bits (232), Expect = 7e-23, Method: Compositional matrix adjust. Identities = 49/140 (35%), Positives = 77/140 (55%), Gaps = 8/140 (6%) Query 1 AMGUFWGPQRDFDQTEGIANTVVGYSGSVSRDSTVNPTYRNIRDYAESIRITYNADKLKY 60 +G FWGP+ F + EG+ T VGY G S+ T ++AE +++ ++ + Y Sbjct 7 GLGCFWGPEIKFSKLEGVIKTEVGYCGGDSKTVTYKEVCTCNTNHAEVVKLDFDPKIISY 66 Query 61 EDLLEMFFDMHHPSDSR-----YGTQYRSAIFVYSEEQKQLAEAACKK---RGSVGELVK 112 E +L FF++H P+ +GTQYRS IF S+ QK++AE+ KK + S + K Sbjct 67 EKILNFFFEIHDPTTLNSQGPDFGTQYRSEIFYLSDRQKEIAESVIKKVNLKLSGNVVTK 126 Query 113 IEDASDFYRGEEYHQKYVEK 132 ++ EEYHQ+Y+EK Sbjct 127 SSLLKNYCPAEEYHQRYLEK 146 >ref|YP_001378527.1| peptide methionine sulfoxide reductase [Anaeromyxobacter sp. Fw109-5] gb|ABS25543.1| peptide methionine sulfoxide reductase [Anaeromyxobacter sp. Fw109-5] Length=216 Score = 95.9 bits (237), Expect = 8e-23, Method: Compositional matrix adjust. Identities = 56/148 (38%), Positives = 81/148 (55%), Gaps = 20/148 (14%) Query 1 AMGUFWGPQRDFDQTEGIANTVVGYSGSVSRDSTVNPTYRNI----RDYAESIRITYNAD 56 A+G FWG +R F G+ T VGY + T NPTYR + +AE++R+ Y+ Sbjct 49 ALGCFWGAERVFWSLPGVYATAVGYQAGL----TPNPTYREVCTGRTGHAEAVRVIYDPA 104 Query 57 KLKYEDLLEMFFDMHHPSDSR-----YGTQYRSAIFVYSEEQKQLAEAA-------CKKR 104 +L+YE LL +F++ H P+ GTQYRS I+V+S Q++ AEA+ + Sbjct 105 RLEYETLLRVFWESHDPTQGMRQGNDTGTQYRSGIYVHSAAQRRSAEASREAYAAALRAA 164 Query 105 GSVGELVKIEDASDFYRGEEYHQKYVEK 132 G +I DA FY EEYHQ+Y+ K Sbjct 165 GHGPITTEILDAPPFYYAEEYHQQYLAK 192 >ref|YP_004351628.1| peptide methionine sulfoxide reductase [Pseudomonas brassicacearum subsp. brassicacearum NFM421] gb|AEA66624.1| Peptide methionine sulfoxide reductase [Pseudomonas brassicacearum subsp. brassicacearum NFM421] Length=215 Score = 95.9 bits (237), Expect = 8e-23, Method: Compositional matrix adjust. Identities = 49/144 (34%), Positives = 77/144 (53%), Gaps = 12/144 (8%) Query 1 AMGUFWGPQRDFDQTEGIANTVVGYSGSVSRDSTVNPTYRNIRDYAESIRITYNADKLKY 60 +G FWG +R F Q EG+ +T VGY+G + + T + ++E + + Y K+ Y Sbjct 55 GLGCFWGAERKFWQHEGVVSTAVGYAGGFTPNPTYEEVCSGLTGHSEVVLVVYEPAKVSY 114 Query 61 EDLLEMFFDMHHPSDSR-----YGTQYRSAIFVYSEEQ-------KQLAEAACKKRGSVG 108 E LL+MF+++H+P+ GTQYRS I+ + Q +Q+ +A K G Sbjct 115 EQLLKMFWELHNPTQGMRQGNDIGTQYRSVIYATNPAQLAAAKHSEQVFQAELTKAGKGT 174 Query 109 ELVKIEDASDFYRGEEYHQKYVEK 132 +IE+A FY E YHQ+Y+ K Sbjct 175 ITTEIEEAPTFYFAEAYHQQYLAK 198 >ref|YP_003650922.1| peptide methionine sulfoxide reductase [Thermobispora bispora DSM 43833] gb|ADG87029.1| peptide methionine sulfoxide reductase [Thermobispora bispora DSM 43833] Length=220 Score = 95.9 bits (237), Expect = 8e-23, Method: Compositional matrix adjust. Identities = 50/144 (35%), Positives = 79/144 (55%), Gaps = 12/144 (8%) Query 1 AMGUFWGPQRDFDQTEGIANTVVGYSGSVSRDSTVNPTYRNIRDYAESIRITYNADKLKY 60 A+G FWG +R F QT G+ T VGY+G + + T + +AE++R+ ++ + Y Sbjct 53 ALGCFWGAERRFWQTPGVVTTAVGYAGGYTPNPTYEEVCTGLTGHAETVRVVFDPKVISY 112 Query 61 EDLLEMFFDMHHPSDSR-----YGTQYRSAIFVYSEEQKQLAEAA-------CKKRGSVG 108 E LL++F++ H P+ GTQYRS IF + EQ++LA A+ + G Sbjct 113 ERLLKVFWESHDPTQGMRQGNDVGTQYRSVIFTHGPEQERLAVASRDAYQKVLTEHGYGR 172 Query 109 ELVKIEDASDFYRGEEYHQKYVEK 132 +I A +FY E+YHQ+Y+ K Sbjct 173 ITTEIVPAGEFYFAEDYHQQYLHK 196 >ref|YP_051685.1| msrA gene product [Pectobacterium atrosepticum SCRI1043] sp|Q6D151.1|MSRA_ERWCT RecName: Full=Peptide methionine sulfoxide reductase MsrA; Short=Protein-methionine-S-oxide reductase; AltName: Full=Peptide-methionine (S)-S-oxide reductase; Short=Peptide Met(O) reductase emb|CAG76495.1| peptide methionine sulfoxide reductase [Pectobacterium atrosepticum SCRI1043] Length=212 Score = 95.9 bits (237), Expect = 8e-23, Method: Compositional matrix adjust. Identities = 56/149 (38%), Positives = 83/149 (56%), Gaps = 21/149 (14%) Query 1 AMGUFWGPQRDFDQTEGIANTVVGYSGSVSRDSTVNPTYRNI----RDYAESIRITYNAD 56 AMG FWG +R F Q GI +T GY G T NPTYR + D+AE++R+ ++ Sbjct 49 AMGCFWGAERLFWQQPGIYSTAAGYIGGY----TPNPTYREVCSGQTDHAEAVRVVFDPA 104 Query 57 KLKYEDLLEMFFDMHHPSDSR-----YGTQYRSAIFVYSEEQKQLAEAACK------KRG 105 + Y LL++F++ H P+ G+QYRSAI+ + EQ+Q A+A+ + + Sbjct 105 TISYSQLLQLFWENHDPAQGMRQGGDIGSQYRSAIYTLTPEQEQAAQASLQRFQQAMREN 164 Query 106 SVGELV--KIEDASDFYRGEEYHQKYVEK 132 S G + +IE A FY EE HQ+Y+ K Sbjct 165 SDGRAISTEIEPAGPFYYAEEDHQQYLHK 193 >ref|XP_002426843.1| EIP28, putative [Pediculus humanus corporis] gb|EEB14105.1| EIP28, putative [Pediculus humanus corporis] Length=217 Score = 95.9 bits (237), Expect = 9e-23, Method: Compositional matrix adjust. Identities = 53/132 (40%), Positives = 80/132 (61%), Gaps = 8/132 (6%) Query 1 AMGUFWGPQRDFDQTEGIANTVVGYSGSVSRDSTVNPTYRNIRDYAESIRITYNADKLKY 60 MG FWG + F T+G+ T VG++G ++DS P Y+N+ D+ E++ + Y+ + + Y Sbjct 17 GMGCFWGVESLFGATKGVIRTRVGFTGG-NKDS---PVYKNLGDHTEAVELDYDPNVVSY 72 Query 61 EDLLEMFFDMHHPSDSRYGTQYRSAIFVYSEEQKQLAEAACKKR-GSVGE--LVKIEDAS 117 EDLL +F+ H PS +R QY SAIF + +QK LAE K++ G V + + A Sbjct 73 EDLLNIFWSNHDPS-ARMSRQYASAIFYHDGDQKTLAEKTLKEQEGKVRSPIVTMLAPAK 131 Query 118 DFYRGEEYHQKY 129 +FY E+YHQKY Sbjct 132 EFYNAEDYHQKY 143 >ref|YP_321699.1| unnamed protein product [Anabaena variabilis ATCC 29413] gb|ABA20804.1| Methionine sulfoxide reductase A [Anabaena variabilis ATCC 29413] Length=222 Score = 95.9 bits (237), Expect = 9e-23, Method: Compositional matrix adjust. Identities = 51/144 (35%), Positives = 76/144 (53%), Gaps = 12/144 (8%) Query 1 AMGUFWGPQRDFDQTEGIANTVVGYSGSVSRDSTVNPTYRNIRDYAESIRITYNADKLKY 60 +G FWG +R F Q G+ T VGY+ + + T + + + E + + ++ + Y Sbjct 53 GLGCFWGAERKFWQQSGVYTTAVGYAAGFTPNPTYDEVCTGLTGHNEVVLVVFDPKVISY 112 Query 61 EDLLEMFFDMHHPSDSR-----YGTQYRSAIFVYSEEQKQLAEA-------ACKKRGSVG 108 LL++F++ H+P+ GTQYRS I+VYSE QKQLAEA A G Sbjct 113 TQLLKVFWESHNPTQGMRQGNDVGTQYRSGIYVYSEAQKQLAEASRDAYQQALSSAGYEK 172 Query 109 ELVKIEDASDFYRGEEYHQKYVEK 132 +I DA +FY E YHQ+Y+ K Sbjct 173 ITTEILDAPEFYYAEAYHQQYLAK 196 >ref|ZP_01438982.1| methionine sulfoxide reductase A [Fulvimarina pelagi HTCC2506] gb|EAU42046.1| methionine sulfoxide reductase A [Fulvimarina pelagi HTCC2506] Length=222 Score = 95.9 bits (237), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 54/149 (36%), Positives = 84/149 (56%), Gaps = 21/149 (14%) Query 1 AMGUFWGPQRDFDQTEGIANTVVGYSGSVSRDSTVNPTYRNI----RDYAESIRITYNAD 56 MG FWG +R F Q +G+ +T VGY G T NPTY+ + + E + + Y+ + Sbjct 54 GMGCFWGIERKFWQLDGVYSTAVGYLGGY----TPNPTYQEVCTGQTGHNEVVLVVYDPE 109 Query 57 KLKYEDLLEMFFDMHHPSDSR-----YGTQYRSAIFVYSEEQKQLAE-------AACKKR 104 K+ Y +LL+ F++ H P+ GTQYRS I+ + +EQ++LAE A K+ Sbjct 110 KITYRELLKTFWEGHDPTQGMRQGNDMGTQYRSGIYTFDDEQRELAEETKAAYQGALKEA 169 Query 105 GSVGEL-VKIEDASDFYRGEEYHQKYVEK 132 G G + +I+ A +FY E+YHQ+Y+ K Sbjct 170 GHTGTISTEIKPAEEFYYAEDYHQQYLAK 198 >ref|ZP_01905792.1| peptide methionine sulfoxide reductase [Plesiocystis pacifica SIR-1] gb|EDM81294.1| peptide methionine sulfoxide reductase [Plesiocystis pacifica SIR-1] Length=222 Score = 95.5 bits (236), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 56/148 (38%), Positives = 85/148 (57%), Gaps = 20/148 (14%) Query 1 AMGUFWGPQRDFDQTEGIANTVVGYSGSVSRDSTVNPTYRNI----RDYAESIRITYNAD 56 AMG FWG +R F Q EG+ +T VGY+G ++ NPTYR + + E +++ ++A Sbjct 58 AMGCFWGAERKFWQLEGVYSTSVGYAGGYTK----NPTYREVCSGQTGHTEVVQVVFDAA 113 Query 57 KLKYEDLLEMFFDMHHPSDSR-----YGTQYRSAIFVYSEEQKQLAEA------ACKKRG 105 K++YE LL++F++ H P+ GTQYRSAI+ YS+ Q A+A A Sbjct 114 KIRYERLLKVFWESHDPTQGMRQGNDVGTQYRSAIYTYSDAQLAQAQASRSEFQAALLGS 173 Query 106 SVGEL-VKIEDASDFYRGEEYHQKYVEK 132 GE+ +I A +Y E+YHQ+Y+ K Sbjct 174 GYGEITTEIRAAPPYYYAEDYHQQYLGK 201 >ref|YP_001867564.1| methionine sulfoxide reductase A [Nostoc punctiforme PCC 73102] gb|ACC82621.1| peptide methionine sulfoxide reductase [Nostoc punctiforme PCC 73102] Length=222 Score = 95.5 bits (236), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 55/148 (37%), Positives = 79/148 (53%), Gaps = 20/148 (14%) Query 1 AMGUFWGPQRDFDQTEGIANTVVGYSGSVSRDSTVNPTYRNI----RDYAESIRITYNAD 56 +G FWG +R F Q +G+ T VGY+ T NPTY + + E + + ++ Sbjct 53 GLGCFWGAERKFWQLKGVYTTAVGYAAGF----TPNPTYEEVCSGRTGHNEVVLVVFDPK 108 Query 57 KLKYEDLLEMFFDMHHPSDSR-----YGTQYRSAIFVYSEEQKQLAEA-------ACKKR 104 + Y +LL++F++ H+P+ GTQYRS I+VYSE QKQLAEA A Sbjct 109 VISYSELLKVFWESHNPTQGMRQGNDAGTQYRSGIYVYSESQKQLAEASREAYQQALNDA 168 Query 105 GSVGELVKIEDASDFYRGEEYHQKYVEK 132 G +I DA +FY E YHQ+Y+ K Sbjct 169 GYGKITTEILDAPEFYYAEAYHQQYLAK 196 >ref|ZP_05061057.1| methionine-S-sulfoxide reductase [gamma proteobacterium HTCC5015] gb|EDY87213.1| methionine-S-sulfoxide reductase [gamma proteobacterium HTCC5015] Length=177 Score = 94.4 bits (233), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 54/142 (38%), Positives = 76/142 (54%), Gaps = 14/142 (10%) Query 1 AMGUFWGPQRDFDQTEGIANTVVGYSGSVSRDSTVNPTYRNIRDYAESIRITYNADKLKY 60 A G FWG Q + +G+ NT VGY+G +N TYRN + +AE+I I ++ L Y Sbjct 23 AGGCFWGMQDLIRKLDGVVNTRVGYTGG----EVLNATYRNHKGHAEAIEIIFDPSTLPY 78 Query 61 EDLLEMFFDMHHPSDSR-----YGTQYRSAIFVYSEEQKQLAEAACKKRGSVGE-----L 110 E LLE FF +H P+ GT YRS IF +E QK A + + G+ + Sbjct 79 EKLLEFFFQIHDPTTENRQGNDVGTSYRSEIFYTNEAQKATALEVIENVNASGKWPSKVV 138 Query 111 VKIEDASDFYRGEEYHQKYVEK 132 K+ +ASDF+ E HQ Y+E+ Sbjct 139 TKVTEASDFWEAEPEHQDYLER 160 >ref|ZP_08491961.1| Peptide methionine sulfoxide reductase msrA [Microcoleus vaginatus FGP-2] gb|EGK89587.1| Peptide methionine sulfoxide reductase msrA [Microcoleus vaginatus FGP-2] Length=217 Score = 95.5 bits (236), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 50/144 (35%), Positives = 76/144 (53%), Gaps = 12/144 (8%) Query 1 AMGUFWGPQRDFDQTEGIANTVVGYSGSVSRDSTVNPTYRNIRDYAESIRITYNADKLKY 60 +G FWG +R F Q G+ +T VGY+ ++ + T N + + E + + ++ + Y Sbjct 53 GLGCFWGAERKFWQQNGVFSTAVGYAAGITPNPTYNEVCSGMTGHNEVVLVVFDPKVISY 112 Query 61 EDLLEMFFDMHHPSDSR-----YGTQYRSAIFVYSEEQKQLAEA-------ACKKRGSVG 108 E LL++F++ H+P+ GTQYRS I+ YS Q QLAEA A G Sbjct 113 ETLLKVFWESHNPTQGMRQGNDSGTQYRSGIYTYSATQMQLAEASRDAYQQALTAAGYGK 172 Query 109 ELVKIEDASDFYRGEEYHQKYVEK 132 +I DA +FY E YHQ+Y+ K Sbjct 173 ITTEIIDAPEFYYAESYHQQYLAK 196 >ref|XP_001637137.1| predicted protein [Nematostella vectensis] gb|EDO45074.1| predicted protein [Nematostella vectensis] Length=169 Score = 94.0 bits (232), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 53/130 (41%), Positives = 76/130 (58%), Gaps = 12/130 (9%) Query 5 FWGPQRDFDQTEGIANTVVGYSGSVSRDSTVNPTYRNIRDYAESIRITYNADKLKYEDLL 64 FWGP + G+ T VGY+G +TVNP Y N+ D+ ESI+I Y+ + Y LL Sbjct 1 FWGPDSRYGGIRGVQQTQVGYTGG----TTVNPIYTNLGDHTESIKIYYDPSIVSYRHLL 56 Query 65 EMFFDMHHPSDSRYGTQYRSAIFVYSEEQKQ-----LAEAACKKRGSVGELVKIEDASDF 119 ++F+ +H P++ + QYRS IFV++E Q++ L A + +G V +V E AS F Sbjct 57 KVFWSIHDPTEVQ-TRQYRSVIFVHNESQRRQAIESLENARRRVKGKVRTVV--EGASRF 113 Query 120 YRGEEYHQKY 129 Y E YHQKY Sbjct 114 YEAEGYHQKY 123 >ref|YP_002483258.1| peptide methionine sulfoxide reductase [Cyanothece sp. PCC 7425] gb|ACL44897.1| peptide methionine sulfoxide reductase [Cyanothece sp. PCC 7425] Length=220 Score = 95.5 bits (236), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 54/148 (36%), Positives = 81/148 (55%), Gaps = 20/148 (14%) Query 1 AMGUFWGPQRDFDQTEGIANTVVGYSGSVSRDSTVNPTYR----NIRDYAESIRITYNAD 56 +G FWG +R F Q EG+ +T VGY+ + T NPTYR + + E +++ ++ Sbjct 52 GLGCFWGAERKFWQQEGVYSTAVGYAAGI----TPNPTYREVCTGLTGHNEVVQVVFDPQ 107 Query 57 KLKYEDLLEMFFDMHHPSDSR-----YGTQYRSAIFVYSEEQKQLAEA-------ACKKR 104 + Y +LL++F++ H P+ GTQYRS I+ YSE QK+LA A A K Sbjct 108 VISYAELLKVFWESHDPTQGMRQGNDAGTQYRSGIYYYSENQKELAIASRDAYQQALTKA 167 Query 105 GSVGELVKIEDASDFYRGEEYHQKYVEK 132 G +I A +FY E+YHQ+Y+ K Sbjct 168 GYGAITTEILPAPEFYYAEDYHQQYLAK 195 >ref|ZP_01629661.1| methionine sulfoxide reductase A [Nodularia spumigena CCY9414] gb|EAW45703.1| methionine sulfoxide reductase A [Nodularia spumigena CCY9414] Length=222 Score = 95.5 bits (236), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 54/148 (36%), Positives = 80/148 (54%), Gaps = 20/148 (14%) Query 1 AMGUFWGPQRDFDQTEGIANTVVGYSGSVSRDSTVNPTY----RNIRDYAESIRITYNAD 56 +G FWG +R F Q G+ T VGY+ ST NP+Y + + E + + ++ + Sbjct 53 GLGCFWGAERKFWQLPGVYTTAVGYAAG----STPNPSYDEVCSGMTGHNEVVLVVFDPN 108 Query 57 KLKYEDLLEMFFDMHHPSDSR-----YGTQYRSAIFVYSEEQKQLAEA-------ACKKR 104 + + LL++F++ H+P+ GTQYRS I+VYS +QKQLAEA A K Sbjct 109 VVSFSQLLKVFWESHNPTQGMRQGNDAGTQYRSGIYVYSPQQKQLAEASRDAYQEALNKA 168 Query 105 GSVGELVKIEDASDFYRGEEYHQKYVEK 132 G +I DA +FY E YHQ+Y+ K Sbjct 169 GYGKITTEILDAPEFYYAEAYHQQYLAK 196 >gb|ADO77343.1| methionine-R-sulfoxide reductase [Halanaerobium praevalens DSM 2228] Length=398 Score = 98.6 bits (244), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 54/132 (41%), Positives = 73/132 (55%), Gaps = 7/132 (5%) Query 1 AMGUFWGPQRDFDQTEGIANTVVGYSGSVSRDSTVNPTYRNIRDYAESIRITYNADKLKY 60 A+G FWGP F EG+ T VGY+G D P Y+NI+D+ E+I I YN + Y Sbjct 43 ALGCFWGPDAYFGALEGVVRTRVGYAGGQKND----PIYKNIKDHTETIEIDYNPAVISY 98 Query 61 EDLLEMFFDMHHPSDSRYGTQYRSAIFVYSEEQKQLAEAACKKRGSVGE---LVKIEDAS 117 ++LLE+FF H+P QY S I +++ QK+ A A +K + E L KI+ Sbjct 99 QELLEIFFKQHNPYSPALSRQYASLILYHNQSQKEKALALKEKLETETEKEVLTKIKKLD 158 Query 118 DFYRGEEYHQKY 129 FY E YHQKY Sbjct 159 KFYLAENYHQKY 170 >ref|XP_001307970.1| possible peptide methionine sulfoxide reductase [Trichomonas vaginalis G3] gb|EAX95040.1| possible peptide methionine sulfoxide reductase, putative [Trichomonas vaginalis G3] Length=166 Score = 94.0 bits (232), Expect = 1e-22, Method: Compositional matrix adjust. Identities = 53/144 (37%), Positives = 78/144 (54%), Gaps = 15/144 (10%) Query 1 AMGUFWGPQRDFDQTEGIANTVVGYSGSVSRDSTVNPTYRNI----RDYAESIRITYNAD 56 A G FWG Q F+ G+ NTV GY+G S NPTY+ + +AE + + Y+ Sbjct 14 ACGCFWGVQHLFENLSGVKNTVCGYTGG----SKENPTYKEVCSHKTGHAEGVLVEYDPK 69 Query 57 KLKYEDLLEMFFDMHHPSDS-----RYGTQYRSAIFVYSEEQKQLAEAACKKRGSVGELV 111 + YEDL + FF++H+P + G QYRS IF ++++QK +A + S G V Sbjct 70 VVSYEDLCKFFFEIHNPGQTDGQGPDIGPQYRSEIFYFNDDQKDIAHHVIELLKSKGHEV 129 Query 112 --KIEDASDFYRGEEYHQKYVEKA 133 K+ AS F+ E+YHQ Y +K Sbjct 130 HTKVTPASTFWNAEDYHQFYYDKT 153 >ref|YP_003994942.1| methionine-R-sulfoxide reductase [Halanaerobium hydrogeniformans] gb|ADQ14588.1| methionine-R-sulfoxide reductase [Halanaerobium hydrogeniformans] Length=400 Score = 98.2 bits (243), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 52/139 (37%), Positives = 77/139 (55%), Gaps = 7/139 (5%) Query 1 AMGUFWGPQRDFDQTEGIANTVVGYSGSVSRDSTVNPTYRNIRDYAESIRITYNADKLKY 60 A+G FWGP F EG+ T VGY+G +T NP+Y+ I D+ E+I I Y+ + + Y Sbjct 44 ALGCFWGPDASFGALEGVVRTRVGYAGG----TTENPSYKAIGDHTETIEIDYDPEVISY 99 Query 61 EDLLEMFFDMHHPSDSRYGTQYRSAIFVYSEEQKQLA---EAACKKRGSVGELVKIEDAS 117 +LLE+FF H+P Y QY S I ++E QK +A +A S I+ Sbjct 100 RELLEIFFKSHNPFQRSYSKQYASLILFHNEVQKNMALEVKAELNAERSAEIKTNIKKLD 159 Query 118 DFYRGEEYHQKYVEKATSR 136 +FY E+YHQK+ + +S+ Sbjct 160 EFYLAEDYHQKFRLQQSSK 178 >ref|YP_003356266.1| peptide methionine sulfoxide reductase MsrA [Methanocella paludicola SANAE] dbj|BAI61283.1| peptide methionine sulfoxide reductase MsrA [Methanocella paludicola SANAE] Length=176 Score = 94.0 bits (232), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 54/146 (37%), Positives = 82/146 (56%), Gaps = 18/146 (12%) Query 1 AMGUFWGPQRDFDQTEGIANTVVGYSGSVSRDSTVNPTYRNI----RDYAESIRITYNAD 56 A G FW + F G+ +T VGY G T NP YR + +AE++++TY+ Sbjct 27 AAGCFWHVEEAFRHIPGVVSTAVGYEGG----RTENPDYREVCTDRTGHAETVQVTYDPS 82 Query 57 KLKYEDLLEMFFDMHHPSDSR-----YGTQYRSAIFVYSEEQKQLAEAACKKRGSVGELV 111 K+ Y+ LL++F+ H P+ +GTQYRS IF +++EQ+ A A+ +K G+ Sbjct 83 KVSYDVLLDVFWSHHDPTTPNRQGPDFGTQYRSVIFYHNKEQEAAARASKEKLQKSGKFK 142 Query 112 K-----IEDASDFYRGEEYHQKYVEK 132 K I A+ F+R EEYHQ+Y+EK Sbjct 143 KPIVTEIVPATKFWRAEEYHQQYLEK 168 >ref|XP_003212572.1| PREDICTED: peptide methionine sulfoxide reductase msrA-like [Meleagris gallopavo] Length=162 Score = 93.6 bits (231), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 54/150 (36%), Positives = 81/150 (54%), Gaps = 24/150 (16%) Query 2 MGUFWGPQRDFDQTEGIANTVVGYSGSVSRDSTVNPTYRNIRD----YAESIRITYNADK 57 MG FWG +R F + G+ +T VGY+G T NPTY +R +AE +R+ +N +K Sbjct 1 MGCFWGVERLFWEMPGVFSTQVGYAGGF----TPNPTYEEVRSGQTGHAEVVRVVFNPNK 56 Query 58 LKYEDLLEMFFDMHHPSDSR-----YGTQYRSAIFVYSEEQKQLA---------EAACKK 103 + YE+LL+ F++ H P+ GTQYRS I + +Q+ A E + + Sbjct 57 ISYEELLKAFWENHDPTQGMRQQEDVGTQYRSIILTLNPQQQAAALRSRDVYQQELSQQH 116 Query 104 RGSVGELVKIEDASDFYRGEEYHQKYVEKA 133 RG + IE A DFY E++HQ+Y+ K Sbjct 117 RGDI--TTTIEPAGDFYYAEDHHQQYLHKV 144 >ref|ZP_06305438.1| Methionine sulfoxide reductase A [Raphidiopsis brookii D9] gb|EFA72982.1| Methionine sulfoxide reductase A [Raphidiopsis brookii D9] Length=221 Score = 95.1 bits (235), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 54/148 (36%), Positives = 79/148 (53%), Gaps = 20/148 (14%) Query 1 AMGUFWGPQRDFDQTEGIANTVVGYSGSVSRDSTVNPTYRNI----RDYAESIRITYNAD 56 +G FWG +R F Q G+ +T VGY+ T NPTYR + + E + + +N Sbjct 53 GLGCFWGAERKFWQQRGVYSTAVGYAAGY----TPNPTYREVCTGMTGHNEVVLVVFNPK 108 Query 57 KLKYEDLLEMFFDMHHPSDSR-----YGTQYRSAIFVYSEEQKQLAEA-------ACKKR 104 + Y LL++F++ H+P+ GTQYRS I+ YS EQ++LAE+ A Sbjct 109 IINYSQLLKVFWESHNPTQGMRQGNDVGTQYRSGIYSYSPEQRELAESSMNAYQQALTNA 168 Query 105 GSVGELVKIEDASDFYRGEEYHQKYVEK 132 G +I DA DFY E+YHQ+Y+ K Sbjct 169 GYGKITTEILDAPDFYYAEDYHQQYLAK 196 >ref|YP_346192.1| methionine sulfoxide reductase A [Pseudomonas fluorescens Pf0-1] gb|ABA72203.1| peptide methionine sulfoxide reductase [Pseudomonas fluorescens Pf0-1] Length=221 Score = 95.1 bits (235), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 52/145 (36%), Positives = 80/145 (55%), Gaps = 14/145 (10%) Query 1 AMGUFWGPQRDFDQTEGIANTVVGYSGSVSRDSTVNPTYRNIRDYAESIRITYNADKLKY 60 +G FWG +R F Q EG+ +TVVGY+G + + T + +AE + + ++ K+ Y Sbjct 56 GLGCFWGAERRFWQREGVVSTVVGYAGGFTPNPTYEEVCSGLTGHAEVVLVVFDKAKVSY 115 Query 61 EDLLEMFFDMHHPSDSR-----YGTQYRSAIFVYSEEQ-------KQLAEAACKKRGSVG 108 E+LL MF+++H+P+ GTQYRS I+ EQ K + +A K G +G Sbjct 116 EELLAMFWELHNPTQGMRQGNDIGTQYRSVIYATHPEQLDAALKSKAVYQAELSKAG-LG 174 Query 109 EL-VKIEDASDFYRGEEYHQKYVEK 132 E+ +IE A Y E YHQ+Y+ K Sbjct 175 EISTEIEQAPTVYFAETYHQQYLAK 199 >ref|YP_002372382.1| methionine sulfoxide reductase A [Cyanothece sp. PCC 8801] sp|B7K079.1|MSRA_CYAP8 RecName: Full=Peptide methionine sulfoxide reductase MsrA; Short=Protein-methionine-S-oxide reductase; AltName: Full=Peptide-methionine (S)-S-oxide reductase; Short=Peptide Met(O) reductase gb|ACK66226.1| peptide methionine sulfoxide reductase [Cyanothece sp. PCC 8801] Length=217 Score = 95.1 bits (235), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 48/144 (33%), Positives = 78/144 (54%), Gaps = 12/144 (8%) Query 1 AMGUFWGPQRDFDQTEGIANTVVGYSGSVSRDSTVNPTYRNIRDYAESIRITYNADKLKY 60 +G FWG +R F Q EG+ T VGY+ ++ + T + + E + + ++ + Y Sbjct 53 GLGCFWGAERKFWQCEGVYTTAVGYAAGITPNPTYQEVCTGLTGHNEVVLVVFDPKIISY 112 Query 61 EDLLEMFFDMHHPSDSR-----YGTQYRSAIFVYSEEQKQLAEA-------ACKKRGSVG 108 E+LL++F++ H+P+ GTQYRS I+VYS + K+ AE A + G Sbjct 113 EELLKVFWESHNPTQGMRQGNDVGTQYRSGIYVYSPQHKKAAETSKEVYQKALNQAGYGD 172 Query 109 ELVKIEDASDFYRGEEYHQKYVEK 132 +I DA +FY E+YHQ+Y+ K Sbjct 173 ITTEILDAPEFYYAEDYHQQYLAK 196 >ref|NP_742503.1| methionine sulfoxide reductase A [Pseudomonas putida KT2440] sp|Q88QZ8.1|MSRA_PSEPK RecName: Full=Peptide methionine sulfoxide reductase MsrA; Short=Protein-methionine-S-oxide reductase; AltName: Full=Peptide-methionine (S)-S-oxide reductase; Short=Peptide Met(O) reductase gb|AAN65967.1|AE016224_11 peptide methionine sulfoxide reductase [Pseudomonas putida KT2440] Length=222 Score = 95.1 bits (235), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 51/144 (35%), Positives = 79/144 (55%), Gaps = 12/144 (8%) Query 1 AMGUFWGPQRDFDQTEGIANTVVGYSGSVSRDSTVNPTYRNIRDYAESIRITYNADKLKY 60 +G FWG +R F Q EG+ +TVVGY+G + T + + E + + ++ DK+ Y Sbjct 57 GLGCFWGAERRFWQREGVVSTVVGYAGGFTPHPTYEEVCSGLTGHTEVVLVVFDKDKVSY 116 Query 61 EDLLEMFFDMHHPSDSR-----YGTQYRSAIFVYSEEQKQLAEA------ACKKRGSVGE 109 +LL MF+++H+P+ GTQYRSAI+ S EQ + A+A A + GE Sbjct 117 RELLAMFWELHNPTQGMRQGNDIGTQYRSAIYCTSPEQLEQAKASRDAFQAELSKAGFGE 176 Query 110 L-VKIEDASDFYRGEEYHQKYVEK 132 + +I+ A Y E YHQ+Y+ K Sbjct 177 ITTEIDQAPTVYFAEAYHQQYLAK 200 >gb|ADR58067.1| MsrA [Pseudomonas putida BIRD-1] Length=222 Score = 94.7 bits (234), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 51/144 (35%), Positives = 79/144 (55%), Gaps = 12/144 (8%) Query 1 AMGUFWGPQRDFDQTEGIANTVVGYSGSVSRDSTVNPTYRNIRDYAESIRITYNADKLKY 60 +G FWG +R F Q EG+ +TVVGY+G + T + + E + + ++ DK+ Y Sbjct 57 GLGCFWGAERRFWQREGVVSTVVGYAGGFTPHPTYEEVCSGLTGHTEVVLVVFDKDKVSY 116 Query 61 EDLLEMFFDMHHPSDSR-----YGTQYRSAIFVYSEEQKQLAEA------ACKKRGSVGE 109 +LL MF+++H+P+ GTQYRSAI+ S EQ + A+A A + GE Sbjct 117 RELLAMFWELHNPTQGMRQGNDIGTQYRSAIYCTSPEQLEQAKASRDAYQAELSKAGFGE 176 Query 110 L-VKIEDASDFYRGEEYHQKYVEK 132 + +I+ A Y E YHQ+Y+ K Sbjct 177 ITTEIDQAPTVYFAEAYHQQYLAK 200 >ref|YP_001618649.1| msrA2 gene product [Sorangium cellulosum 'So ce 56'] emb|CAN98169.1| msrA2 [Sorangium cellulosum 'So ce 56'] Length=384 Score = 97.8 bits (242), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 61/150 (41%), Positives = 84/150 (56%), Gaps = 19/150 (13%) Query 1 AMGUFWGPQRDFDQTEGIANTVVGYSGSVSRDSTVNPTYRNIR----DYAESIRITYNAD 56 A G FWG + Q G+ T VGY+G T PTY +++ +AES+RI ++ Sbjct 230 AGGCFWGMEELLRQIPGVLETEVGYAGG----RTKAPTYEDVKTGSTGHAESVRIVFDPA 285 Query 57 KLKYEDLLE-MFFDMHHPS-----DSRYGTQYRSAIFVYSEEQKQLAEAACKKRGSVGE- 109 KL Y +LLE FF MH P+ + GTQYRSAIFV + EQ+++AE + G+ Sbjct 286 KLSYAELLEKWFFRMHDPTTRNRQGNDVGTQYRSAIFVTTPEQRRIAEEVKARVDKSGKW 345 Query 110 ----LVKIEDASDFYRGEEYHQKYVEKATS 135 + +I +A F R EEYHQKY+EK S Sbjct 346 RAPLVTEIVEAGPFTRAEEYHQKYLEKYPS 375 >gb|EGS56459.1| methionine-S-sulfoxide reductase [Vibrio cholerae HE-09] Length=212 Score = 94.7 bits (234), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 54/150 (36%), Positives = 84/150 (56%), Gaps = 24/150 (16%) Query 1 AMGUFWGPQRDFDQTEGIANTVVGYSGSVSRDSTVNPTYRNI----RDYAESIRITYNAD 56 MG FWG +R F Q +G+ +T VGYSG T NPTY + + E +R+ ++ + Sbjct 48 GMGCFWGAERLFWQLDGVLSTSVGYSGGF----TPNPTYEEVCSGKTGHTEVVRVIFDPE 103 Query 57 KLKYEDLLEMFFDMHHPSDSR-----YGTQYRSAIFVYSEEQKQLAEAA---------CK 102 +L +LL F++ H P+ GTQYRSAI+ +SEEQ+++AEA+ + Sbjct 104 RLPLTELLRAFWERHDPTQGMRQGNDRGTQYRSAIYTFSEEQREIAEASKAAYQALLTTQ 163 Query 103 KRGSVGELVKIEDASDFYRGEEYHQKYVEK 132 R S+ +I A+++Y E YHQ+Y+ K Sbjct 164 HRPSI--TTEILPAAEYYFAETYHQQYLAK 191 >ref|NP_967993.1| hypothetical protein Bd1058 [Bdellovibrio bacteriovorus HD100] emb|CAE78986.1| msrA [Bdellovibrio bacteriovorus HD100] Length=200 Score = 94.4 bits (233), Expect = 2e-22, Method: Compositional matrix adjust. Identities = 53/142 (37%), Positives = 82/142 (58%), Gaps = 10/142 (7%) Query 1 AMGUFWGPQRDFDQTEGIANTVVGYSGSVSRDSTVNPTYRNIRDYAESIRITYNADKLKY 60 A G FWG + + G+ T VGY G ++++ N ++AE+++IT+N +K+ Y Sbjct 42 AGGCFWGMEDLLRKLPGVTQTEVGYMGGDTKNANYNIVKTGTTNHAETVKITFNPEKITY 101 Query 61 EDLLEMFFDMHHPSDSR-----YGTQYRSAIFVYSEEQKQLAE---AACKKRGSVGELV- 111 +DLL F+ +H P+ + GTQYRSAIF S++Q+ AE A K G+ V Sbjct 102 QDLLLYFYKIHDPTTTNRQGNDIGTQYRSAIFYTSDKQRDEAEIVRARVDKSGAWKSPVV 161 Query 112 -KIEDASDFYRGEEYHQKYVEK 132 +I A+DF+ EEYHQ Y++K Sbjct 162 TQIVKAADFWSAEEYHQDYLQK 183 >ref|YP_001265718.1| methionine sulfoxide reductase A [Pseudomonas putida F1] gb|ABQ76534.1| peptide methionine sulfoxide reductase [Pseudomonas putida F1] Length=240 Score = 95.1 bits (235), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 51/144 (35%), Positives = 79/144 (55%), Gaps = 12/144 (8%) Query 1 AMGUFWGPQRDFDQTEGIANTVVGYSGSVSRDSTVNPTYRNIRDYAESIRITYNADKLKY 60 +G FWG +R F Q EG+ +TVVGY+G + T + + E + + ++ DK+ Y Sbjct 75 GLGCFWGAERRFWQREGVVSTVVGYAGGFTPHPTYEEVCSGLTGHTEVVLVVFDKDKVSY 134 Query 61 EDLLEMFFDMHHPSDSR-----YGTQYRSAIFVYSEEQKQLAEA------ACKKRGSVGE 109 +LL MF+++H+P+ GTQYRSAI+ S EQ + A+A A + GE Sbjct 135 RELLAMFWELHNPTQGMRQGNDIGTQYRSAIYCTSPEQLEQAKASRDAFQAELSKAGFGE 194 Query 110 L-VKIEDASDFYRGEEYHQKYVEK 132 + +I+ A Y E YHQ+Y+ K Sbjct 195 ITTEIDQAPTVYFAEAYHQQYLAK 218 >ref|YP_413133.1| methionine sulfoxide reductase A [Nitrosospira multiformis ATCC 25196] gb|ABB75741.1| peptide methionine sulfoxide reductase [Nitrosospira multiformis ATCC 25196] Length=158 Score = 93.2 bits (230), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 52/144 (36%), Positives = 82/144 (57%), Gaps = 18/144 (13%) Query 3 GUFWGPQRDFDQTEGIANTVVGYSGSVSRDSTVNPTYRNI----RDYAESIRITYNADKL 58 G FWG + F +G+ GYSG + NP+YR++ +AE +++ Y+ ++ Sbjct 10 GCFWGVEAAFRAVKGVKEVTSGYSGGHMK----NPSYRDVCTDKTGHAEVVQVEYDPSQV 65 Query 59 KYEDLLEMFFDMHHPS-----DSRYGTQYRSAIFVYSEEQKQLAEAACKKRGSVGE---- 109 Y++LL++F++ H+P+ G QYRSAIF Y+ EQ+ A A+ +K G Sbjct 66 SYDELLDVFWNCHNPTTLNRQGPDVGKQYRSAIFFYTPEQESAARASKEKLEQSGRWRAP 125 Query 110 -LVKIEDASDFYRGEEYHQKYVEK 132 + +I ASDFY EEYHQ+Y+EK Sbjct 126 VVTEITPASDFYPAEEYHQRYLEK 149 >ref|YP_473948.1| methionine-S-sulfoxide reductase [Synechococcus sp. JA-3-3Ab] gb|ABC98685.1| methionine-S-sulfoxide reductase [Synechococcus sp. JA-3-3Ab] Length=224 Score = 94.7 bits (234), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 49/144 (34%), Positives = 76/144 (53%), Gaps = 12/144 (8%) Query 1 AMGUFWGPQRDFDQTEGIANTVVGYSGSVSRDSTVNPTYRNIRDYAESIRITYNADKLKY 60 MG FWG +R F Q G+ T VGY+G + + T + + E +R+ Y+ ++ Y Sbjct 56 GMGCFWGAERRFWQLPGVFTTAVGYAGGYTPNPTYEEVCTGLTGHNEVVRVVYDPSQISY 115 Query 61 EDLLEMFFDMHHPSDSR-----YGTQYRSAIFVYSEEQKQLAEA-------ACKKRGSVG 108 LL++F++ H P+ GTQYRS I+VYS+ Q++LAE G Sbjct 116 LQLLKVFWENHDPTQGMRQGNDVGTQYRSGIYVYSQTQRELAEKTRDLYQQVLSAHGCGP 175 Query 109 ELVKIEDASDFYRGEEYHQKYVEK 132 +I +A +FY E+YHQ+Y+ K Sbjct 176 ITTEILEAPEFYYAEDYHQQYLAK 199 >ref|YP_003137974.1| unnamed protein product [Cyanothece sp. PCC 8802] gb|ACV01139.1| peptide methionine sulfoxide reductase [Cyanothece sp. PCC 8802] Length=217 Score = 94.4 bits (233), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 48/144 (33%), Positives = 78/144 (54%), Gaps = 12/144 (8%) Query 1 AMGUFWGPQRDFDQTEGIANTVVGYSGSVSRDSTVNPTYRNIRDYAESIRITYNADKLKY 60 +G FWG +R F Q EG+ T VGY+ ++ + T + + E + + ++ + Y Sbjct 53 GLGCFWGAERKFWQCEGVYTTAVGYAAGITPNPTYQEVCTELTGHNEVVLVVFDPKIISY 112 Query 61 EDLLEMFFDMHHPSDSR-----YGTQYRSAIFVYSEEQKQLAEA-------ACKKRGSVG 108 E+LL++F++ H+P+ GTQYRS I+VYS + K+ AE A + G Sbjct 113 EELLKVFWESHNPTQGMRQGNDVGTQYRSGIYVYSPQHKKAAETSKEVYQKALNQAGYGD 172 Query 109 ELVKIEDASDFYRGEEYHQKYVEK 132 +I DA +FY E+YHQ+Y+ K Sbjct 173 ITTEILDAPEFYYAEDYHQQYLAK 196 >ref|NP_681675.1| unnamed protein product [Thermosynechococcus elongatus BP-1] dbj|BAC08437.1| peptide methionine sulfoxide reductase [Thermosynechococcus elongatus BP-1] Length=224 Score = 94.7 bits (234), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 51/144 (35%), Positives = 76/144 (53%), Gaps = 12/144 (8%) Query 1 AMGUFWGPQRDFDQTEGIANTVVGYSGSVSRDSTVNPTYRNIRDYAESIRITYNADKLKY 60 MG FWG +R F Q G+ T VGY+G + + T + + E +R+ ++ + Y Sbjct 54 GMGCFWGAERKFWQVPGVYVTAVGYAGGYTPNPTYEEVCTGMTGHNEVVRVVFDPQIVSY 113 Query 61 EDLLEMFFDMHHPSDSR-----YGTQYRSAIFVYSEEQKQLAE-------AACKKRGSVG 108 E+LL++F++ H P+ GTQYRS I+ YS EQK LAE AA G Sbjct 114 EELLKVFWENHDPTQGMRQGNDVGTQYRSGIYYYSPEQKALAEASRDRYQAALTAAGYGT 173 Query 109 ELVKIEDASDFYRGEEYHQKYVEK 132 +I A +FY E YHQ+Y+++ Sbjct 174 ITTEILPAPEFYFAEPYHQQYLQR 197 >ref|YP_635173.1| methionine-S-sulfoxide reductase [Myxococcus xanthus DK 1622] gb|ABF85983.1| methionine-S-sulfoxide reductase [Myxococcus xanthus DK 1622] Length=218 Score = 94.4 bits (233), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 54/148 (36%), Positives = 79/148 (53%), Gaps = 20/148 (14%) Query 1 AMGUFWGPQRDFDQTEGIANTVVGYSGSVSRDSTVNPTYRNI----RDYAESIRITYNAD 56 +G FWG +R F QT G+ +T VGY+G T NPTYR + + E +R+ ++ Sbjct 52 GLGCFWGAERKFYQTPGVYSTAVGYAGG----PTPNPTYREVCSGLTGHNEVVRVVFDPK 107 Query 57 KLKYEDLLEMFFDMHHPSDSR-----YGTQYRSAIFVYSEEQKQLAEA-------ACKKR 104 K+ +E LL +F++ H P+ GTQYRS I+ SE Q++ A A A R Sbjct 108 KVSFEQLLRVFWESHDPTQGMRQGNDVGTQYRSGIYFTSEAQQRAAVASRDAYQKALAAR 167 Query 105 GSVGELVKIEDASDFYRGEEYHQKYVEK 132 G ++ A FY E+YHQ+Y+EK Sbjct 168 GFDAITTELLPAPPFYFAEDYHQQYLEK 195 >ref|YP_004219095.1| peptide methionine sulfoxide reductase [Granulicella tundricola] gb|ADW70315.1| peptide methionine sulfoxide reductase [Granulicella tundricola] Length=158 Score = 92.8 bits (229), Expect = 3e-22, Method: Compositional matrix adjust. Identities = 48/144 (33%), Positives = 80/144 (56%), Gaps = 18/144 (13%) Query 3 GUFWGPQRDFDQTEGIANTVVGYSGSVSRDSTVNPTYRNI----RDYAESIRITYNADKL 58 G FWG + F++ G+ +T VGY+G +PTY+ + +AE + +T++ +L Sbjct 11 GCFWGAEARFNELAGVLDTAVGYAGG----GLEHPTYKEVCTDKTGHAEVVEVTFDPSRL 66 Query 59 KYEDLLEMFFDMHHPSDSR-----YGTQYRSAIFVYSEEQKQLAEAACKKRGSVGE---- 109 YE LL+ FF +H P+ +G QYRS +F ++EQ A+A + + G Sbjct 67 SYEALLDAFFALHDPTQLNRQGPDWGKQYRSVVFANNDEQMAAAKAKIAELSASGSYRKP 126 Query 110 -LVKIEDASDFYRGEEYHQKYVEK 132 + +E+A F++ EEYHQ+Y+EK Sbjct 127 IVTTVEEAPMFWKAEEYHQRYLEK 150 >gb|EGH57366.1| methionine sulfoxide reductase A [Pseudomonas syringae pv. maculicola str. ES4326] Length=215 Score = 94.0 bits (232), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 46/144 (32%), Positives = 79/144 (55%), Gaps = 12/144 (8%) Query 1 AMGUFWGPQRDFDQTEGIANTVVGYSGSVSRDSTVNPTYRNIRDYAESIRITYNADKLKY 60 MG FWG +R Q EG+ +TV GY+G + + T + + E + + Y +K+ Y Sbjct 55 GMGCFWGAERRLWQQEGVVSTVAGYAGGFTPNPTYEEVCSGLTGHTEVVLVVYEPEKISY 114 Query 61 EDLLEMFFDMHHPSDSR-----YGTQYRSAIFVYSEEQKQLAEAACK------KRGSVGE 109 E LL++F++ H+P+ GTQYRS I+ + EQ +A+A+ + + +G+ Sbjct 115 ESLLKVFWEAHNPTQGMRQGNDIGTQYRSVIYCTTPEQLAIAKASAEAFQAELSKAGLGK 174 Query 110 L-VKIEDASDFYRGEEYHQKYVEK 132 + ++E+A Y E YHQ+Y+ K Sbjct 175 ITTEVEEAPTVYFAEAYHQQYLAK 198 >ref|YP_004582223.1| unnamed protein product [Frankia symbiont of Datisca glomerata] gb|AEH08302.1| Peptide methionine sulfoxide reductase msrA [Frankia symbiont of Datisca glomerata] Length=220 Score = 94.4 bits (233), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 48/144 (33%), Positives = 78/144 (54%), Gaps = 12/144 (8%) Query 1 AMGUFWGPQRDFDQTEGIANTVVGYSGSVSRDSTVNPTYRNIRDYAESIRITYNADKLKY 60 +G FWG +R F QT G+ +T VGY+G ++ + T T + + E +++ ++ + Y Sbjct 52 GLGCFWGAERKFWQTPGVYSTAVGYAGGITPNPTYEETCSGLTGHTEVVQVVFDPAVVSY 111 Query 61 EDLLEMFFDMHHPSDSR-----YGTQYRSAIFVYSEEQKQLA-------EAACKKRGSVG 108 E+LL++F++ H P+ GTQYRSAI+ +S+EQ A +A G Sbjct 112 ENLLKVFWEAHDPTQGMRQGNDAGTQYRSAIYTFSDEQLAAAHRSRDAFQAVLDTAGFGP 171 Query 109 ELVKIEDASDFYRGEEYHQKYVEK 132 +I A FY E+YHQ+Y+ K Sbjct 172 ITTEIAPAGPFYFAEDYHQQYLHK 195 >ref|YP_594497.1| peptide methionine sulfoxide reductase [Lawsonia intracellularis PHE/MN1-00] emb|CAJ54175.1| peptide methionine sulfoxide reductase [Lawsonia intracellularis PHE/MN1-00] Length=166 Score = 92.8 bits (229), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 52/144 (36%), Positives = 81/144 (56%), Gaps = 15/144 (10%) Query 1 AMGUFWGPQRDFDQTEGIANTVVGYSGSVSRDSTVNPTYRNI----RDYAESIRITYNAD 56 A G FWG + F T G+ + V GY G ST NPTY + +AE++ + +++ Sbjct 15 AGGCFWGIEDVFQNTPGVIDAVSGYMGG----STKNPTYEQVCTGQTGHAETVHVHFDSM 70 Query 57 KLKYEDLLEMFFDMHHPSD-----SRYGTQYRSAIFVYSEEQKQLAEAACK--KRGSVGE 109 ++ Y+DL+++FF++H P+ GTQYRS IF +E QK +AE K K+ ++ Sbjct 71 QVSYKDLVKLFFEIHDPTQYNRQGPDIGTQYRSVIFYANELQKDIAEQIIKQLKQTNLPI 130 Query 110 LVKIEDASDFYRGEEYHQKYVEKA 133 + ++ S FY EEYHQ + EK Sbjct 131 VTQLLPVSTFYPAEEYHQNFTEKT 154 >emb|CBE67521.1| Peptide methionine sulfoxide reductase msrA (Protein-methionine-S-oxide reductase) (Peptide-methionine (S)-S-oxide reductase) (Peptide Met(O) reductase) [NC10 bacterium 'Dutch sediment'] Length=146 Score = 92.0 bits (227), Expect = 4e-22, Method: Compositional matrix adjust. Identities = 52/142 (37%), Positives = 79/142 (56%), Gaps = 18/142 (13%) Query 3 GUFWGPQRDFDQTEGIANTVVGYSGSVSRDSTVNPTYRNI----RDYAESIRITYNADKL 58 G FWG + +F + G+ +T VGY G NPTYR++ +AE + + Y+ ++ Sbjct 9 GCFWGVEAEFRRVPGVVSTAVGYMGGTFE----NPTYRDVCSGTTGHAEVVEVEYDPSQV 64 Query 59 KYEDLLEMFFDMHHPSDSR-----YGTQYRSAIFVYSEEQKQLAEAACKKRGSVGE---- 109 Y+DLL +F+ +H P+ G QYRSAIF + EQ+ A A+ +K G+ Sbjct 65 TYDDLLALFWSIHDPTTLNRQGPDRGAQYRSAIFFHDAEQQTAAVASKRKLELSGKHQQP 124 Query 110 -LVKIEDASDFYRGEEYHQKYV 130 + +I AS FYR EEYHQ+Y+ Sbjct 125 IVTEITAASTFYRAEEYHQQYL 146 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Jan 12, 2012 6:11 PM Number of letters in database: 1,532,225,471 Number of sequences in database: 16,971,855 Lambda K H 0.316 0.132 0.381 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 16971855 Number of Hits to DB: 147733741 Number of extensions: 5358165 Number of successful extensions: 14812 Number of sequences better than 100: 386 Number of HSP's better than 100 without gapping: 0 Number of HSP's gapped: 14098 Number of HSP's successfully gapped: 386 Length of query: 137 Length of database: 5827192767 Length adjustment: 102 Effective length of query: 35 Effective length of database: 4096063557 Effective search space: 143362224495 Effective search space used: 143362224495 T: 11 A: 40 X1: 16 (7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (20.4 bits) S2: 68 (30.8 bits)