BLASTP 2.2.26+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Reference for compositional score matrix adjustment: Stephen F. Altschul, John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109. RID: H14RDGHJ01N Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects 16,971,855 sequences; 5,827,192,767 total letters Query= scaffold_6:subseq(2493110,30000).pep Length=79 Score E Sequences producing significant alignments: (Bits) Value ref|YP_003855251.1| peptide methionine sulfoxide reductase pr... 84.0 6e-19 ref|ZP_09291573.1| peptide methionine sulfoxide reductase [Me... 83.2 6e-19 ref|ZP_05099095.1| methionine-S-sulfoxide reductase [Roseobac... 83.2 7e-19 ref|ZP_01754195.1| methionine-S-sulfoxide reductase [Roseobac... 82.8 8e-19 ref|YP_002129164.1| peptide methionine sulfoxide reductase Ms... 82.0 1e-18 ref|YP_003058529.1| peptide methionine sulfoxide reductase [H... 82.4 2e-18 ref|ZP_05124425.1| methionine-S-sulfoxide reductase [Rhodobac... 81.3 4e-18 ref|ZP_08862955.1| methionine-S-sulfoxide reductase [Ruegeria... 81.3 5e-18 ref|ZP_05079013.1| methionine-S-sulfoxide reductase [Rhodobac... 80.9 6e-18 ref|ZP_05785949.1| peptide methionine sulfoxide reductase Msr... 80.9 6e-18 ref|ZP_05076728.1| methionine-S-sulfoxide reductase [Rhodobac... 80.9 7e-18 ref|YP_001534802.1| peptide methionine sulfoxide reductase [D... 80.5 1e-17 ref|ZP_08329039.1| peptide methionine sulfoxide reductase [ga... 79.7 1e-17 ref|YP_614873.1| peptide methionine sulfoxide reductase [Rueg... 80.1 1e-17 ref|YP_165287.1| msrA-1 gene product [Ruegeria pomeroyi DSS-3... 79.0 3e-17 ref|ZP_01055348.1| methionine-S-sulfoxide reductase [Roseobac... 78.6 4e-17 emb|CBJ48353.1| methionine sulfoxide reductase [Ectocarpus si... 79.3 6e-17 ref|ZP_01311674.1| peptide methionine sulfoxide reductase [De... 77.8 7e-17 ref|ZP_05783272.1| peptide methionine sulfoxide reductase Msr... 77.8 8e-17 ref|ZP_07376195.1| peptide-methionine (S)-S-oxide reductase [... 77.4 1e-16 ref|ZP_02150010.1| methionine-S-sulfoxide reductase [Phaeobac... 77.8 1e-16 ref|ZP_05741299.1| peptide-methionine (S)-S-oxide reductase [... 77.0 2e-16 ref|ZP_02145396.1| methionine-S-sulfoxide reductase [Phaeobac... 77.0 2e-16 ref|ZP_02152458.1| methionine-S-sulfoxide reductase, putative... 76.6 3e-16 ref|ZP_01226757.1| peptide methionine sulfoxide reductase msr... 76.6 3e-16 ref|ZP_01439985.1| probable peptide methionine sulfoxide redu... 75.9 4e-16 ref|YP_001091743.1| peptide methionine sulfoxide reductase [P... 75.9 4e-16 ref|ZP_00959494.1| methionine-S-sulfoxide reductase [Roseovar... 75.9 4e-16 ref|ZP_01154950.1| methionine-S-sulfoxide reductase [Oceanico... 75.9 5e-16 ref|ZP_05342732.1| peptide methionine sulfoxide reductase Msr... 75.5 7e-16 ref|ZP_09257232.1| methionine-R-sulfoxide reductase [Leptospi... 75.1 9e-16 ref|ZP_01203203.1| putative peptide methionine sulfoxide redu... 75.1 9e-16 ref|ZP_01615524.1| Peptide methionine sulfoxide reductase msr... 74.3 1e-15 ref|YP_001484761.1| peptide methionine sulfoxide reductase [P... 74.7 1e-15 ref|ZP_01881332.1| methionine-S-sulfoxide reductase [Roseovar... 75.1 1e-15 gb|ABE11284.1| peptide methionine sulfoxide reductase [uncult... 74.7 1e-15 ref|ZP_02197527.1| bifunctional methionine sulfoxide reductas... 76.6 1e-15 ref|ZP_01037994.1| methionine-S-sulfoxide reductase [Roseovar... 75.1 1e-15 ref|ZP_01901435.1| methionine-S-sulfoxide reductase [Roseobac... 75.1 1e-15 ref|NP_387174.1| peptide methionine sulfoxide reductase [Sino... 74.3 1e-15 gb|EHK76210.1| peptide methionine sulfoxide reductase [Sinorh... 74.3 2e-15 ref|YP_001009923.1| unnamed protein product [Prochlorococcus ... 74.3 2e-15 ref|YP_376571.1| methionine sulfoxide reductase A [Synechococ... 74.3 2e-15 ref|NP_896655.1| peptide methionine sulfoxide reductase MsrA ... 74.3 2e-15 gb|ADP99713.1| bifunctional methionine sulfoxide reductase A/... 76.3 2e-15 ref|ZP_09162129.1| methionine-R-sulfoxide reductase [Marinoba... 76.3 2e-15 ref|YP_119435.1| methionine sulfoxide reductase A [Nocardia f... 73.2 2e-15 ref|ZP_09084907.1| methionine sulfoxide reductase A [Mycobact... 73.2 3e-15 ref|YP_001551272.1| peptide methionine sulfoxide reductase [P... 73.9 3e-15 ref|YP_183232.1| bifunctional methionine sulfoxide reductase ... 75.5 3e-15 ref|YP_001073725.1| methionine sulfoxide reductase A [Mycobac... 72.8 3e-15 ref|YP_642252.1| methionine sulfoxide reductase A [Mycobacter... 72.8 3e-15 ref|ZP_01893346.1| peptide methionine sulfoxide reductase [Ma... 75.9 3e-15 ref|ZP_01441677.1| methionine-S-sulfoxide reductase [Pelagiba... 73.9 3e-15 ref|YP_002827621.1| methionine sulfoxide reductase [Sinorhizo... 73.6 3e-15 ref|YP_004870234.1| msrAB gene product [Glaciecola nitratired... 75.5 3e-15 ref|ZP_05721494.1| peptide methionine sulfoxide reductase [Vi... 75.5 4e-15 ref|ZP_00961811.1| methionine-S-sulfoxide reductase [Sulfitob... 73.6 4e-15 ref|ZP_06031940.1| peptide methionine sulfoxide reductase [Vi... 75.5 4e-15 ref|YP_956480.1| methionine sulfoxide reductase A [Mycobacter... 72.4 4e-15 ref|YP_001132375.1| methionine sulfoxide reductase A [Mycobac... 72.4 4e-15 ref|ZP_00954502.1| methionine-S-sulfoxide reductase [Sulfitob... 73.6 4e-15 ref|YP_001328619.1| peptide methionine sulfoxide reductase [S... 73.2 4e-15 gb|ABE11408.1| peptide methionine sulfoxide reductase [uncult... 73.2 4e-15 ref|ZP_01468497.1| Methionine sulfoxide reductase A [Synechoc... 73.2 4e-15 gb|EHB55286.1| Peptide methionine sulfoxide reductase msrA [M... 72.0 5e-15 ref|YP_340099.1| peptide methionine sulfoxide reductase MsrA ... 73.6 6e-15 ref|ZP_01259519.1| bifunctional methionine sulfoxide reductas... 74.7 6e-15 ref|ZP_05051727.1| Peptide methionine sulfoxide reductase sup... 73.2 6e-15 ref|ZP_06041485.1| peptide methionine sulfoxide reductase [Vi... 74.7 6e-15 ref|ZP_05717698.1| peptide methionine sulfoxide reductase [Vi... 74.7 7e-15 ref|ZP_01984405.1| peptide methionine sulfoxide reductase Msr... 74.7 7e-15 ref|ZP_09311124.1| methionine sulfoxide reductase A [Rhodococ... 72.0 7e-15 ref|YP_001448804.1| peptide methionine sulfoxide reductase [V... 74.7 7e-15 ref|ZP_06175696.1| peptide methionine sulfoxide reductase [Vi... 74.3 8e-15 ref|NP_875805.1| msrA gene product [Prochlorococcus marinus s... 72.4 8e-15 ref|YP_460304.1| peptide methionine sulfoxide reductase [Synt... 74.3 9e-15 ref|ZP_05067199.1| methionine-S-sulfoxide reductase [Octadeca... 70.1 9e-15 ref|NP_893450.1| peptide methionine sulfoxide reductase [Proc... 72.0 1e-14 ref|YP_888692.1| msrA gene product [Mycobacterium smegmatis s... 72.0 1e-14 ref|YP_680821.1| msrA-1 gene product [Roseobacter denitrifica... 72.4 1e-14 ref|ZP_08911606.1| peptide methionine sulfoxide reductase [Vi... 74.3 1e-14 ref|ZP_05137437.1| methionine-S-sulfoxide reductase [Prochlor... 72.0 1e-14 gb|EGF40956.1| bifunctional methionine sulfoxide reductase A/... 73.9 1e-14 ref|ZP_04921356.1| peptide methionine sulfoxide reductase fam... 73.9 1e-14 ref|NP_799717.1| bifunctional methionine sulfoxide reductase ... 73.9 1e-14 ref|YP_397927.1| peptide methionine sulfoxide reductase [Proc... 72.0 1e-14 ref|YP_004432982.1| peptide methionine sulfoxide reductase [G... 71.6 2e-14 ref|YP_001228070.1| peptide methionine sulfoxide reductase [S... 72.0 2e-14 ref|ZP_00996658.1| methionine sulfoxide reductase A [Janibact... 72.0 2e-14 ref|ZP_09242719.1| peptide methionine sulfoxide reductase Msr... 71.2 2e-14 ref|ZP_01957326.1| peptide methionine sulfoxide reductase [Vi... 73.6 2e-14 ref|ZP_01740356.1| methionine-S-sulfoxide reductase [Rhodobac... 71.2 2e-14 ref|YP_001215396.1| peptide methionine sulfoxide reductase [V... 73.2 2e-14 ref|ZP_01679086.1| peptide methionine sulfoxide reductase [Vi... 73.2 2e-14 ref|ZP_05089893.1| methionine-S-sulfoxide reductase [Ruegeria... 71.6 2e-14 ref|ZP_01745901.1| methionine-S-sulfoxide reductase [Sagittul... 71.2 2e-14 ref|ZP_02168487.1| probable peptide methionine sulfoxide redu... 71.2 2e-14 gb|EGS73905.1| methionine-S-sulfoxide reductase [Vibrio chole... 73.2 3e-14 gb|EGS57585.1| methionine-S-sulfoxide reductase [Vibrio chole... 73.2 3e-14 ALIGNMENTS >ref|YP_003855251.1| peptide methionine sulfoxide reductase protein [Parvularcula bermudensis HTCC2503] gb|ADM10109.1| putative peptide methionine sulfoxide reductase protein [Parvularcula bermudensis HTCC2503] Length=242 Score = 84.0 bits (206), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 43/75 (57%), Positives = 48/75 (64%), Gaps = 1/75 (1%) Query 5 KSLVVALGCFWCAEQAFEQYVPGVVEAVSGYAGGTNDNPSYRDHPGHYEVILIEYDPNLT 64 +SLVVA GCFWC E E VPGV EAVSGY GG +YRDH GH EV+ I YDP T Sbjct 72 ESLVVAGGCFWCVEHDMEA-VPGVYEAVSGYGGGEKREATYRDHEGHREVVEIYYDPRET 130 Query 65 TVALLIEYAYRNMDP 79 T A L+ R +DP Sbjct 131 TYAELVHIFLRTIDP 145 >ref|ZP_09291573.1| peptide methionine sulfoxide reductase [Mesorhizobium alhagi CCNWXJ12-2] gb|EHK58435.1| peptide methionine sulfoxide reductase [Mesorhizobium alhagi CCNWXJ12-2] Length=202 Score = 83.2 bits (204), Expect = 6e-19, Method: Compositional matrix adjust. Identities = 36/72 (50%), Positives = 50/72 (69%), Gaps = 1/72 (1%) Query 8 VVALGCFWCAEQAFEQYVPGVVEAVSGYAGGTNDNPSYRDHPGHYEVILIEYDPNLTTVA 67 + A GCFWC E F+ YVPGV+ SGY+GGT NP+Y++H GH EV+ IE+DP T+ Sbjct 32 IFAGGCFWCVESDFD-YVPGVISTTSGYSGGTLQNPTYQNHEGHREVVKIEFDPARTSFD 90 Query 68 LLIEYAYRNMDP 79 L+ +R++DP Sbjct 91 KLVNVFFRSVDP 102 >ref|ZP_05099095.1| methionine-S-sulfoxide reductase [Roseobacter sp. GAI101] gb|EEB83397.1| methionine-S-sulfoxide reductase [Roseobacter sp. GAI101] Length=212 Score = 83.2 bits (204), Expect = 7e-19, Method: Compositional matrix adjust. Identities = 40/83 (48%), Positives = 55/83 (66%), Gaps = 5/83 (6%) Query 1 ADGNKSLVVALGCFWCAEQAFEQYVPGVVEAVSGYAGGTNDNPSYRD----HPGHYEVIL 56 A G ++L+VA GCFWC E FE V GV EAVSG+AGGT NP+Y+ GHYE + Sbjct 20 AAGTETLLVAGGCFWCVESDFEG-VKGVKEAVSGFAGGTVKNPTYKQVVAGRTGHYEAVQ 78 Query 57 IEYDPNLTTVALLIEYAYRNMDP 79 I++DP + +V L+ +R++DP Sbjct 79 IQFDPAVVSVDQLLAMFFRSIDP 101 >ref|ZP_01754195.1| methionine-S-sulfoxide reductase [Roseobacter sp. SK209-2-6] gb|EBA16995.1| methionine-S-sulfoxide reductase [Roseobacter sp. SK209-2-6] Length=206 Score = 82.8 bits (203), Expect = 8e-19, Method: Compositional matrix adjust. Identities = 39/79 (49%), Positives = 53/79 (67%), Gaps = 5/79 (6%) Query 5 KSLVVALGCFWCAEQAFEQYVPGVVEAVSGYAGGTNDNPSYRD----HPGHYEVILIEYD 60 ++LVVA GCFWC E FE VPGV+EAVSGY GG NP+Y+ GHYE + I +D Sbjct 18 ETLVVAGGCFWCVESDFES-VPGVIEAVSGYTGGRTKNPTYKQIGKGGTGHYEAVEISFD 76 Query 61 PNLTTVALLIEYAYRNMDP 79 P+ + A L++ +R++DP Sbjct 77 PSKVSRAHLLDLFFRSVDP 95 >ref|YP_002129164.1| peptide methionine sulfoxide reductase MsrA [Phenylobacterium zucineum HLK1] gb|ACG76735.1| peptide methionine sulfoxide reductase MsrA [Phenylobacterium zucineum HLK1] Length=189 Score = 82.0 bits (201), Expect = 1e-18, Method: Compositional matrix adjust. Identities = 37/72 (51%), Positives = 49/72 (68%), Gaps = 1/72 (1%) Query 8 VVALGCFWCAEQAFEQYVPGVVEAVSGYAGGTNDNPSYRDHPGHYEVILIEYDPNLTTVA 67 V A GCFW E+ FE PGVV AVSGY+GGT P+YR+HPGH E + + YDP + A Sbjct 28 VFAGGCFWSVEKFFEAK-PGVVSAVSGYSGGTLRQPTYRNHPGHLEAVRVTYDPAKVSYA 86 Query 68 LLIEYAYRNMDP 79 L+++ + N+DP Sbjct 87 QLVDHFFHNIDP 98 >ref|YP_003058529.1| peptide methionine sulfoxide reductase [Hirschia baltica ATCC 49814] gb|ACT57832.1| peptide methionine sulfoxide reductase [Hirschia baltica ATCC 49814] Length=218 Score = 82.4 bits (202), Expect = 2e-18, Method: Compositional matrix adjust. Identities = 40/79 (51%), Positives = 54/79 (68%), Gaps = 5/79 (6%) Query 5 KSLVVALGCFWCAEQAFEQYVPGVVEAVSGYAGGTNDNPSY----RDHPGHYEVILIEYD 60 K++VVA GCFWC E F++ V GVV +SGY+GG DNP+Y R+ GHYEV+ IEYD Sbjct 42 KTIVVAGGCFWCVESDFDK-VDGVVATISGYSGGHVDNPTYKQVSREDTGHYEVLQIEYD 100 Query 61 PNLTTVALLIEYAYRNMDP 79 P + L+ Y +R++DP Sbjct 101 PETVSFDELLTYYWRHVDP 119 >ref|ZP_05124425.1| methionine-S-sulfoxide reductase [Rhodobacteraceae bacterium KLH11] gb|EEE39057.1| methionine-S-sulfoxide reductase [Rhodobacteraceae bacterium KLH11] Length=223 Score = 81.3 bits (199), Expect = 4e-18, Method: Compositional matrix adjust. Identities = 39/83 (47%), Positives = 52/83 (63%), Gaps = 5/83 (6%) Query 1 ADGNKSLVVALGCFWCAEQAFEQYVPGVVEAVSGYAGGTNDNPSYRD----HPGHYEVIL 56 A+ ++L VA GCFWC E FE VPGV+EAVSGY GG DNP+Y+ GHYE + Sbjct 32 AESPETLTVAGGCFWCVESDFES-VPGVIEAVSGYTGGKADNPTYKQVSKGGTGHYEAVQ 90 Query 57 IEYDPNLTTVALLIEYAYRNMDP 79 I +DP + L+ +R++DP Sbjct 91 ITFDPAQVSRETLLNMFFRSVDP 113 >ref|ZP_08862955.1| methionine-S-sulfoxide reductase [Ruegeria sp. TW15] Length=223 Score = 81.3 bits (199), Expect = 5e-18, Method: Compositional matrix adjust. Identities = 39/83 (47%), Positives = 52/83 (63%), Gaps = 5/83 (6%) Query 1 ADGNKSLVVALGCFWCAEQAFEQYVPGVVEAVSGYAGGTNDNPSY----RDHPGHYEVIL 56 A G ++L VA GCFWC E FE VPGV+ AVSGY GGT +NP+Y + GHYE + Sbjct 32 AAGTETLTVAGGCFWCVESDFES-VPGVIGAVSGYTGGTTENPTYDQVSKGGSGHYEAVQ 90 Query 57 IEYDPNLTTVALLIEYAYRNMDP 79 I +DP + L+ +R++DP Sbjct 91 ITFDPARVSRETLLNMFFRSVDP 113 >ref|ZP_05079013.1| methionine-S-sulfoxide reductase [Rhodobacterales bacterium Y4I] gb|EDZ46992.1| methionine-S-sulfoxide reductase [Rhodobacterales bacterium Y4I] Length=221 Score = 80.9 bits (198), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 40/83 (48%), Positives = 51/83 (61%), Gaps = 5/83 (6%) Query 1 ADGNKSLVVALGCFWCAEQAFEQYVPGVVEAVSGYAGGTNDNPSYRD----HPGHYEVIL 56 A + L VA GCFWC E FE VPGV+EAVSGY GG NP+Y+D GHYE + Sbjct 29 AQSTEVLTVAGGCFWCVESDFES-VPGVIEAVSGYTGGDMKNPTYKDVTRGGSGHYEAVQ 87 Query 57 IEYDPNLTTVALLIEYAYRNMDP 79 I +DP + L+E +R++DP Sbjct 88 IIFDPAKVSRERLLEMFFRSVDP 110 >ref|ZP_05785949.1| peptide methionine sulfoxide reductase MsrA 2 [Silicibacter lacuscaerulensis ITI-1157] gb|EEX09065.1| peptide methionine sulfoxide reductase MsrA 2 [Silicibacter lacuscaerulensis ITI-1157] Length=221 Score = 80.9 bits (198), Expect = 6e-18, Method: Compositional matrix adjust. Identities = 40/83 (48%), Positives = 51/83 (61%), Gaps = 5/83 (6%) Query 1 ADGNKSLVVALGCFWCAEQAFEQYVPGVVEAVSGYAGGTNDNPSYRD----HPGHYEVIL 56 A G ++L VA GCFWC E FE VPGV+EAVSGY GGT NP+Y GHYE + Sbjct 30 AAGTETLTVAGGCFWCVEADFES-VPGVIEAVSGYTGGTTPNPTYSQVSSGGTGHYEAVQ 88 Query 57 IEYDPNLTTVALLIEYAYRNMDP 79 I +DP + L+ +R++DP Sbjct 89 ITFDPARVSRETLLNLFFRSVDP 111 >ref|ZP_05076728.1| methionine-S-sulfoxide reductase [Rhodobacterales bacterium HTCC2083] gb|EDZ44388.1| methionine-S-sulfoxide reductase [Rhodobacteraceae bacterium HTCC2083] Length=220 Score = 80.9 bits (198), Expect = 7e-18, Method: Compositional matrix adjust. Identities = 39/83 (47%), Positives = 51/83 (61%), Gaps = 5/83 (6%) Query 1 ADGNKSLVVALGCFWCAEQAFEQYVPGVVEAVSGYAGGTNDNPSYRD----HPGHYEVIL 56 A G + L VA GCFWC E FE+ VPGV E VSGY GG NP+Y+D GHYE + Sbjct 29 AAGTEVLTVAGGCFWCVESDFER-VPGVKEVVSGYTGGKKKNPTYKDVTKGGSGHYEAVQ 87 Query 57 IEYDPNLTTVALLIEYAYRNMDP 79 I++DP + L+ +R++DP Sbjct 88 IQFDPAKVSRDQLLNMFFRSVDP 110 >ref|YP_001534802.1| peptide methionine sulfoxide reductase [Dinoroseobacter shibae DFL 12] gb|ABV95201.1| peptide methionine sulfoxide reductase [Dinoroseobacter shibae DFL 12] Length=226 Score = 80.5 bits (197), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 40/83 (48%), Positives = 53/83 (64%), Gaps = 5/83 (6%) Query 1 ADGNKSLVVALGCFWCAEQAFEQYVPGVVEAVSGYAGGTNDNPSYRD----HPGHYEVIL 56 A G + +VVA GCFWC E FE VPGV+EAVSG+AGGT NP Y++ GH EV+ Sbjct 36 AAGTEKVVVAGGCFWCVESDFEG-VPGVIEAVSGFAGGTTPNPEYKEVTKGGTGHLEVVE 94 Query 57 IEYDPNLTTVALLIEYAYRNMDP 79 IE+DP + + + R++DP Sbjct 95 IEFDPRKISTREIYDLFLRSIDP 117 >ref|ZP_08329039.1| peptide methionine sulfoxide reductase [gamma proteobacterium IMCC1989] gb|EGG94829.1| peptide methionine sulfoxide reductase [gamma proteobacterium IMCC1989] Length=198 Score = 79.7 bits (195), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 35/80 (44%), Positives = 53/80 (66%), Gaps = 5/80 (6%) Query 4 NKSLVVALGCFWCAEQAFEQYVPGVVEAVSGYAGGTNDNPSYRD----HPGHYEVILIEY 59 N++++VA GCFWC E +E+Y PGV+ A SGY G+ NP+YR GHYEV+ I Y Sbjct 21 NQTIIVAGGCFWCVESDYEKY-PGVLSAESGYINGSTKNPTYRQVASKKTGHYEVVKITY 79 Query 60 DPNLTTVALLIEYAYRNMDP 79 +P++ + L++Y + +DP Sbjct 80 NPDIVSAKKLVDYFWLTIDP 99 >ref|YP_614873.1| peptide methionine sulfoxide reductase [Ruegeria sp. TM1040] gb|ABF65611.1| peptide methionine sulfoxide reductase [Ruegeria sp. TM1040] Length=223 Score = 80.1 bits (196), Expect = 1e-17, Method: Compositional matrix adjust. Identities = 37/83 (45%), Positives = 52/83 (63%), Gaps = 5/83 (6%) Query 1 ADGNKSLVVALGCFWCAEQAFEQYVPGVVEAVSGYAGGTNDNPSYRD----HPGHYEVIL 56 A +L+VA GCFWC E FE V GV EA+SGY GGT +NP+Y+ GHYE + Sbjct 29 AQTQDTLIVAGGCFWCVESDFES-VRGVSEAISGYTGGTTENPTYKQIGSGRTGHYEAVK 87 Query 57 IEYDPNLTTVALLIEYAYRNMDP 79 I +DP + + L++ +R++DP Sbjct 88 ILFDPTIVSRESLLDLFFRSIDP 110 >ref|YP_165287.1| msrA-1 gene product [Ruegeria pomeroyi DSS-3] gb|AAV93345.1| methionine-S-sulfoxide reductase [Ruegeria pomeroyi DSS-3] Length=220 Score = 79.0 bits (193), Expect = 3e-17, Method: Compositional matrix adjust. Identities = 38/80 (48%), Positives = 52/80 (65%), Gaps = 5/80 (6%) Query 4 NKSLVVALGCFWCAEQAFEQYVPGVVEAVSGYAGGTNDNPSY----RDHPGHYEVILIEY 59 ++L VA GCFWC E FE+ VPGV+ AVSGY GGT DNP+Y R GH+E + I + Sbjct 32 TQTLTVAGGCFWCVEADFEK-VPGVLGAVSGYTGGTLDNPTYKQVTRGGTGHFEAVQILF 90 Query 60 DPNLTTVALLIEYAYRNMDP 79 DP+ + L+ +R++DP Sbjct 91 DPDQVSRERLLHMFFRSVDP 110 >ref|ZP_01055348.1| methionine-S-sulfoxide reductase [Roseobacter sp. MED193] gb|EAQ46291.1| methionine-S-sulfoxide reductase [Roseobacter sp. MED193] Length=221 Score = 78.6 bits (192), Expect = 4e-17, Method: Compositional matrix adjust. Identities = 38/83 (46%), Positives = 50/83 (60%), Gaps = 5/83 (6%) Query 1 ADGNKSLVVALGCFWCAEQAFEQYVPGVVEAVSGYAGGTNDNPSY----RDHPGHYEVIL 56 A ++L VA GCFWC E FE VPGV+EA+SGY GGT NP+Y + GH E + Sbjct 29 AQTQETLTVAGGCFWCVESDFES-VPGVIEAISGYTGGTTKNPTYGEVGKGSTGHLEAVQ 87 Query 57 IEYDPNLTTVALLIEYAYRNMDP 79 I +DP + L+E R++DP Sbjct 88 IIFDPTQVSRQHLLELFIRSVDP 110 >emb|CBJ48353.1| methionine sulfoxide reductase [Ectocarpus siliculosus] Length=268 Score = 79.3 bits (194), Expect = 6e-17, Method: Composition-based stats. Identities = 38/79 (48%), Positives = 49/79 (62%), Gaps = 5/79 (6%) Query 5 KSLVVALGCFWCAEQAFEQYVPGVVEAVSGYAGGTNDNPSYRD----HPGHYEVILIEYD 60 K V GCFWC E F+ + GV + VSGYAGGT +NP+YRD GH EV+L+EYD Sbjct 67 KKAVFGGGCFWCIEAVFKT-LDGVSKVVSGYAGGTMENPTYRDVCSGRTGHAEVVLLEYD 125 Query 61 PNLTTVALLIEYAYRNMDP 79 P + T L+E ++ DP Sbjct 126 PTVVTFDELLEVFWKTHDP 144 >ref|ZP_01311674.1| peptide methionine sulfoxide reductase [Desulfuromonas acetoxidans DSM 684] gb|EAT16484.1| peptide methionine sulfoxide reductase [Desulfuromonas acetoxidans DSM 684] Length=196 Score = 77.8 bits (190), Expect = 7e-17, Method: Compositional matrix adjust. Identities = 36/73 (49%), Positives = 49/73 (67%), Gaps = 2/73 (3%) Query 8 VVALGCFWCAEQAFEQYVPGVVEAVSGYAGGTNDNPSYR-DHPGHYEVILIEYDPNLTTV 66 + A GCFWC E FE+ + GV + VSG+ GGT +NP+Y H GHYE + IEYDP + + Sbjct 25 IFAGGCFWCMESDFEK-LSGVTDVVSGFTGGTVENPTYNGSHEGHYEAVEIEYDPRVVSY 83 Query 67 ALLIEYAYRNMDP 79 L+EY + N+DP Sbjct 84 QDLLEYYWVNIDP 96 >ref|ZP_05783272.1| peptide methionine sulfoxide reductase MsrA 2 [Citreicella sp. SE45] gb|EEX13171.1| peptide methionine sulfoxide reductase MsrA 2 [Citreicella sp. SE45] Length=215 Score = 77.8 bits (190), Expect = 8e-17, Method: Compositional matrix adjust. Identities = 38/80 (48%), Positives = 49/80 (61%), Gaps = 5/80 (6%) Query 4 NKSLVVALGCFWCAEQAFEQYVPGVVEAVSGYAGGTNDNPSY----RDHPGHYEVILIEY 59 + +VVA GCFWC E FE+ VPGV+EAVSGY GG + NP+Y R GHYE + I Y Sbjct 27 RQQIVVAGGCFWCVEADFEK-VPGVIEAVSGYTGGKSSNPTYKEVSRGGTGHYEAVRISY 85 Query 60 DPNLTTVALLIEYAYRNMDP 79 D + L +R++DP Sbjct 86 DSARVSRDQLFAMFFRSVDP 105 >ref|ZP_07376195.1| peptide-methionine (S)-S-oxide reductase [Ahrensia sp. R2A130] gb|EFL88089.1| peptide-methionine (S)-S-oxide reductase [Ahrensia sp. R2A130] Length=204 Score = 77.4 bits (189), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 34/75 (45%), Positives = 48/75 (64%), Gaps = 1/75 (1%) Query 5 KSLVVALGCFWCAEQAFEQYVPGVVEAVSGYAGGTNDNPSYRDHPGHYEVILIEYDPNLT 64 K+ +VA GCFWC E+ FE V GV + VSGY GG NP+YR H GH E + I YD + Sbjct 26 KTAIVAGGCFWCIEKDFET-VAGVKDVVSGYTGGEKKNPTYRSHKGHREAVKITYDSSKI 84 Query 65 TVALLIEYAYRNMDP 79 + A +++ ++ +DP Sbjct 85 SYAEILDTFFKTVDP 99 >ref|ZP_02150010.1| methionine-S-sulfoxide reductase [Phaeobacter gallaeciensis 2.10] gb|EDQ08592.1| methionine-S-sulfoxide reductase [Phaeobacter gallaeciensis 2.10] Length=225 Score = 77.8 bits (190), Expect = 1e-16, Method: Compositional matrix adjust. Identities = 37/83 (45%), Positives = 49/83 (59%), Gaps = 5/83 (6%) Query 1 ADGNKSLVVALGCFWCAEQAFEQYVPGVVEAVSGYAGGTNDNPSYRD----HPGHYEVIL 56 A ++L VA GCFWC E FE VPGV+ AVSGY GG +P+Y+ GHYE + Sbjct 33 AQSVETLTVAGGCFWCVESDFES-VPGVLSAVSGYTGGNTKSPTYKQVTAGGTGHYEAVQ 91 Query 57 IEYDPNLTTVALLIEYAYRNMDP 79 I +DP + T L+ R++DP Sbjct 92 IRFDPTMVTRKQLLSMFLRSVDP 114 >ref|ZP_05741299.1| peptide-methionine (S)-S-oxide reductase [Silicibacter sp. TrichCH4B] gb|EEW58100.1| peptide-methionine (S)-S-oxide reductase [Silicibacter sp. TrichCH4B] Length=221 Score = 77.0 bits (188), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 38/83 (46%), Positives = 52/83 (63%), Gaps = 5/83 (6%) Query 1 ADGNKSLVVALGCFWCAEQAFEQYVPGVVEAVSGYAGGTNDNPSYRD----HPGHYEVIL 56 A ++L+VA GCFWC E FE V GV EAVSGY GGT NP+Y+ GHYE + Sbjct 29 AQPQETLIVAGGCFWCVESDFES-VKGVTEAVSGYIGGTTRNPTYKQVGGGGTGHYEAVK 87 Query 57 IEYDPNLTTVALLIEYAYRNMDP 79 I +DP++ + L++ R++DP Sbjct 88 IFFDPSVVSRESLLKLFIRSIDP 110 >ref|ZP_02145396.1| methionine-S-sulfoxide reductase [Phaeobacter gallaeciensis BS107] gb|EDQ12949.1| methionine-S-sulfoxide reductase [Phaeobacter gallaeciensis BS107] Length=225 Score = 77.0 bits (188), Expect = 2e-16, Method: Compositional matrix adjust. Identities = 36/78 (46%), Positives = 47/78 (60%), Gaps = 5/78 (6%) Query 6 SLVVALGCFWCAEQAFEQYVPGVVEAVSGYAGGTNDNPSYRD----HPGHYEVILIEYDP 61 +L VA GCFWC E FE VPGV+ AVSGY GG +P+Y+ GHYE + I +DP Sbjct 38 TLTVAGGCFWCVESDFES-VPGVLSAVSGYTGGNTKSPTYKQVTAGGTGHYEAVQIRFDP 96 Query 62 NLTTVALLIEYAYRNMDP 79 + T L+ R++DP Sbjct 97 TMVTRRQLLSMFLRSVDP 114 >ref|ZP_02152458.1| methionine-S-sulfoxide reductase, putative [Oceanibulbus indolifex HEL-45] gb|EDQ06325.1| methionine-S-sulfoxide reductase, putative [Oceanibulbus indolifex HEL-45] Length=221 Score = 76.6 bits (187), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 36/77 (47%), Positives = 49/77 (64%), Gaps = 5/77 (6%) Query 7 LVVALGCFWCAEQAFEQYVPGVVEAVSGYAGGTNDNPSYR----DHPGHYEVILIEYDPN 62 L VA GCFWC E FE V GV EAVSG+AGG NP+Y+ + GHYE + I++DP Sbjct 35 LTVAGGCFWCVEADFES-VKGVKEAVSGFAGGRTKNPTYKQVTSSNTGHYEAVQIQFDPA 93 Query 63 LTTVALLIEYAYRNMDP 79 + + L+ +R++DP Sbjct 94 VVSRDTLLNLFFRSIDP 110 >ref|ZP_01226757.1| peptide methionine sulfoxide reductase msrA [Aurantimonas manganoxydans SI85-9A1] gb|EAS50631.1| peptide methionine sulfoxide reductase msrA [Aurantimonas manganoxydans SI85-9A1] Length=224 Score = 76.6 bits (187), Expect = 3e-16, Method: Compositional matrix adjust. Identities = 32/79 (41%), Positives = 50/79 (63%), Gaps = 1/79 (1%) Query 1 ADGNKSLVVALGCFWCAEQAFEQYVPGVVEAVSGYAGGTNDNPSYRDHPGHYEVILIEYD 60 A ++ + A GCFWC E F+ ++ GV++ SGY GG N NP+Y++HPGH E + I YD Sbjct 46 AQSTETAIFAGGCFWCVESDFD-HLAGVLDTTSGYIGGQNQNPTYQNHPGHVEAVKITYD 104 Query 61 PNLTTVALLIEYAYRNMDP 79 P + L++ + ++DP Sbjct 105 PKRVSYDQLLDVFWHSVDP 123 >ref|ZP_01439985.1| probable peptide methionine sulfoxide reductase protein [Fulvimarina pelagi HTCC2506] gb|EAU40761.1| probable peptide methionine sulfoxide reductase protein [Fulvimarina pelagi HTCC2506] Length=204 Score = 75.9 bits (185), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 33/79 (42%), Positives = 51/79 (65%), Gaps = 1/79 (1%) Query 1 ADGNKSLVVALGCFWCAEQAFEQYVPGVVEAVSGYAGGTNDNPSYRDHPGHYEVILIEYD 60 A ++ + A GCFWC E F+ +V GV E +SGY GG ++NP+Y++H GH E + I YD Sbjct 26 AQNTETAIFAGGCFWCVEADFD-HVDGVSETISGYIGGQSENPTYQNHSGHVEAVRITYD 84 Query 61 PNLTTVALLIEYAYRNMDP 79 P+ + L+E + ++DP Sbjct 85 PSKVSYDELLEVFWHSIDP 103 >ref|YP_001091743.1| peptide methionine sulfoxide reductase [Prochlorococcus marinus str. MIT 9301] gb|ABO18142.1| Peptide methionine sulfoxide reductase [Prochlorococcus marinus str. MIT 9301] Length=200 Score = 75.9 bits (185), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 32/75 (43%), Positives = 48/75 (64%), Gaps = 1/75 (1%) Query 5 KSLVVALGCFWCAEQAFEQYVPGVVEAVSGYAGGTNDNPSYRDHPGHYEVILIEYDPNLT 64 + L++A GCFWC E E + G+ SGY+GG NP+Y +H GH EV+L++YDP L Sbjct 23 EELILAGGCFWCLEHDLES-LKGINFVKSGYSGGDLQNPTYENHEGHQEVVLVDYDPQLV 81 Query 65 TVALLIEYAYRNMDP 79 + ++ +RN+DP Sbjct 82 ILPKILRLYFRNIDP 96 >ref|ZP_00959494.1| methionine-S-sulfoxide reductase [Roseovarius nubinhibens ISM] gb|EAP77956.1| methionine-S-sulfoxide reductase [Roseovarius nubinhibens ISM] Length=219 Score = 75.9 bits (185), Expect = 4e-16, Method: Compositional matrix adjust. Identities = 38/80 (48%), Positives = 46/80 (58%), Gaps = 5/80 (6%) Query 4 NKSLVVALGCFWCAEQAFEQYVPGVVEAVSGYAGGTNDNPSY----RDHPGHYEVILIEY 59 ++L VA GCFWC E FE VPGV E VSGY GG NP Y R GHYE + I Y Sbjct 32 TRTLTVAGGCFWCVESDFES-VPGVSEVVSGYTGGKVKNPDYKQVTRGGTGHYEAVQIHY 90 Query 60 DPNLTTVALLIEYAYRNMDP 79 DP + L+ +R++DP Sbjct 91 DPARVSRDTLLSMFFRSIDP 110 >ref|ZP_01154950.1| methionine-S-sulfoxide reductase [Oceanicola granulosus HTCC2516] gb|EAR53060.1| methionine-S-sulfoxide reductase [Oceanicola granulosus HTCC2516] Length=221 Score = 75.9 bits (185), Expect = 5e-16, Method: Compositional matrix adjust. Identities = 38/83 (46%), Positives = 52/83 (63%), Gaps = 5/83 (6%) Query 1 ADGNKSLVVALGCFWCAEQAFEQYVPGVVEAVSGYAGGTNDNPSYRD----HPGHYEVIL 56 A + +L VA GCFWC E FE+ V GV EAVSGY GG+ +NP+YR+ GHYE + Sbjct 31 AQADSTLTVAGGCFWCVEADFER-VTGVTEAVSGYTGGSVENPTYREVTRGGTGHYEAVE 89 Query 57 IEYDPNLTTVALLIEYAYRNMDP 79 I YD ++ L+ +R++DP Sbjct 90 IMYDSDVVDRRRLLNLFFRSIDP 112 >ref|ZP_05342732.1| peptide methionine sulfoxide reductase MsrA 2 [Thalassiobium sp. R2A62] gb|EET48399.1| peptide methionine sulfoxide reductase MsrA 2 [Thalassiobium sp. R2A62] Length=220 Score = 75.5 bits (184), Expect = 7e-16, Method: Compositional matrix adjust. Identities = 37/79 (47%), Positives = 49/79 (62%), Gaps = 5/79 (6%) Query 5 KSLVVALGCFWCAEQAFEQYVPGVVEAVSGYAGGTNDNPSY----RDHPGHYEVILIEYD 60 +++VVA GCFWC E FEQ V GV E VSGY GG+ NP+Y R GHYE + I YD Sbjct 34 QTMVVAGGCFWCVESDFEQ-VRGVSEVVSGYTGGSTTNPTYKQVTRGGTGHYEAVEITYD 92 Query 61 PNLTTVALLIEYAYRNMDP 79 + + L+ +R++DP Sbjct 93 ADRVSYGQLLNLFFRSVDP 111 >ref|ZP_09257232.1| methionine-R-sulfoxide reductase [Leptospira licerasiae serovar Varillal str. MMD0835] Length=210 Score = 75.1 bits (183), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 34/79 (43%), Positives = 48/79 (61%), Gaps = 5/79 (6%) Query 5 KSLVVALGCFWCAEQAFEQYVPGVVEAVSGYAGGTNDNPSYRD----HPGHYEVILIEYD 60 ++ + A GCFWC E+ FE+ +PGV+ +SGY GG NP+Y D GH E +LI YD Sbjct 36 ETAIFAGGCFWCMERPFEK-LPGVISVISGYTGGKEKNPTYEDVGYGRTGHRESVLITYD 94 Query 61 PNLTTVALLIEYAYRNMDP 79 P A L++ +R +DP Sbjct 95 PKKIDYAKLLDTYWRQIDP 113 >ref|ZP_01203203.1| putative peptide methionine sulfoxide reductase [Flavobacteria bacterium BBFL7] gb|EAS18699.1| putative peptide methionine sulfoxide reductase [Flavobacteria bacterium BBFL7] Length=212 Score = 75.1 bits (183), Expect = 9e-16, Method: Compositional matrix adjust. Identities = 36/79 (46%), Positives = 51/79 (65%), Gaps = 3/79 (4%) Query 2 DGNKSLVVALGCFWCAEQAFEQYVPGVVEAVSGYAGGTNDNPSYRDHPGHYEVILIEYDP 61 DG + A GCFWC E+ +E V GV EA+SGY+GG DNP+YR+H H E I YDP Sbjct 38 DGFERAYFASGCFWCVEEIYES-VEGVEEAISGYSGGNTDNPTYRNHADHAEANEIIYDP 96 Query 62 NLTTVALLIE--YAYRNMD 78 N+ + L++ +A +N++ Sbjct 97 NVVSFKTLVDVYFASQNIE 115 >ref|ZP_01615524.1| Peptide methionine sulfoxide reductase msrA 2 (Protein-methionine-S-oxide reductase 2) (Peptide Met(O) [marine gamma proteobacterium HTCC2143] gb|EAW32607.1| Peptide methionine sulfoxide reductase msrA 2 (Protein-methionine-S-oxide reductase 2) (Peptide Met(O) [marine gamma proteobacterium HTCC2143] Length=180 Score = 74.3 bits (181), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 35/75 (47%), Positives = 49/75 (65%), Gaps = 2/75 (3%) Query 6 SLVVALGCFWCAEQAFEQYVPGVVEAVSGYAGGTNDNPSYR-DHPGHYEVILIEYDPNLT 64 + V+A GCFWC E FE+ + GV + VSG+ GGT NP+Y +H GH+E + I YDP + Sbjct 12 TTVLAGGCFWCMESDFEK-LEGVTDVVSGFTGGTAKNPTYNGNHAGHFEAVEITYDPEII 70 Query 65 TVALLIEYAYRNMDP 79 T L+E + N+DP Sbjct 71 TYEKLLENFWINIDP 85 >ref|YP_001484761.1| peptide methionine sulfoxide reductase [Prochlorococcus marinus str. MIT 9215] gb|ABV51175.1| Peptide methionine sulfoxide reductase [Prochlorococcus marinus str. MIT 9215] Length=200 Score = 74.7 bits (182), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 32/75 (43%), Positives = 48/75 (64%), Gaps = 1/75 (1%) Query 5 KSLVVALGCFWCAEQAFEQYVPGVVEAVSGYAGGTNDNPSYRDHPGHYEVILIEYDPNLT 64 + L++A GCFWC E E + G+ SGY+GG NP+Y +H GH EV+L++YD L Sbjct 23 EELILAGGCFWCLEHDLES-LKGINFVQSGYSGGDLQNPTYENHEGHQEVVLVDYDSQLV 81 Query 65 TVALLIEYAYRNMDP 79 T+ ++ +RN+DP Sbjct 82 TLPKILRLYFRNIDP 96 >ref|ZP_01881332.1| methionine-S-sulfoxide reductase [Roseovarius sp. TM1035] gb|EDM30297.1| methionine-S-sulfoxide reductase [Roseovarius sp. TM1035] Length=222 Score = 75.1 bits (183), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 37/80 (46%), Positives = 49/80 (61%), Gaps = 5/80 (6%) Query 4 NKSLVVALGCFWCAEQAFEQYVPGVVEAVSGYAGGTNDNPSYRD----HPGHYEVILIEY 59 ++L+VA GCFWC E FEQ V GV+ A SG+ GGT NPSY+ GHYE + + + Sbjct 33 TETLIVAGGCFWCVESDFEQ-VRGVIAAESGFTGGTVKNPSYKQVTSGGTGHYEAVRLTF 91 Query 60 DPNLTTVALLIEYAYRNMDP 79 DP T A L+ R++DP Sbjct 92 DPAQVTRAQLLHLFLRSVDP 111 >gb|ABE11284.1| peptide methionine sulfoxide reductase [uncultured Prochlorococcus marinus clone HF10-88H9] Length=200 Score = 74.7 bits (182), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 32/75 (43%), Positives = 48/75 (64%), Gaps = 1/75 (1%) Query 5 KSLVVALGCFWCAEQAFEQYVPGVVEAVSGYAGGTNDNPSYRDHPGHYEVILIEYDPNLT 64 + L++A GCFWC E E + G+ SGY+GG NP+Y +H GH EV+L++YD L Sbjct 23 EELILAGGCFWCLEHDLES-LKGINFVQSGYSGGDLQNPTYENHEGHQEVVLVDYDSQLV 81 Query 65 TVALLIEYAYRNMDP 79 T+ ++ +RN+DP Sbjct 82 TLPKILRLYFRNIDP 96 >ref|ZP_02197527.1| bifunctional methionine sulfoxide reductase A/B protein [Vibrio sp. AND4] gb|EDP57398.1| bifunctional methionine sulfoxide reductase A/B protein [Vibrio sp. AND4] Length=380 Score = 76.6 bits (187), Expect = 1e-15, Method: Composition-based stats. Identities = 34/75 (45%), Positives = 51/75 (68%), Gaps = 5/75 (7%) Query 9 VALGCFWCAEQAFEQYVPGVVEAVSGYAGGTNDNPSYRD----HPGHYEVILIEYDPNLT 64 +A GCFWC E EQ +PGV++ +SGY+GG NP+YR GH EVI ++YDPN+ Sbjct 45 LAGGCFWCTESDLEQ-LPGVLDVISGYSGGQLKNPTYRQVSSGKSGHIEVIEVKYDPNVV 103 Query 65 TVALLIEYAYRNMDP 79 + +++Y +R++DP Sbjct 104 SYEQVLDYFFRHIDP 118 >ref|ZP_01037994.1| methionine-S-sulfoxide reductase [Roseovarius sp. 217] gb|EAQ23386.1| methionine-S-sulfoxide reductase [Roseovarius sp. 217] Length=232 Score = 75.1 bits (183), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 37/80 (46%), Positives = 50/80 (63%), Gaps = 5/80 (6%) Query 4 NKSLVVALGCFWCAEQAFEQYVPGVVEAVSGYAGGTNDNPSYRD----HPGHYEVILIEY 59 ++LVVA GCFWC E FEQ V GV+ A SG+ GGT +NPSY+ GH+E + I + Sbjct 43 TETLVVAGGCFWCVESDFEQ-VKGVIAAESGFTGGTVENPSYKQVTAGGTGHFEAVQITF 101 Query 60 DPNLTTVALLIEYAYRNMDP 79 DP + A L+ R++DP Sbjct 102 DPAQVSRAQLLHLFLRSVDP 121 >ref|ZP_01901435.1| methionine-S-sulfoxide reductase [Roseobacter sp. AzwK-3b] gb|EDM73133.1| methionine-S-sulfoxide reductase [Roseobacter sp. AzwK-3b] Length=220 Score = 75.1 bits (183), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 39/83 (47%), Positives = 50/83 (60%), Gaps = 5/83 (6%) Query 1 ADGNKSLVVALGCFWCAEQAFEQYVPGVVEAVSGYAGGTNDNPSYRD----HPGHYEVIL 56 A G ++L VA GCFWC E FE+ V GV E VSGY GGT NP+Y+ GHYE + Sbjct 30 AAGTETLTVAGGCFWCVEADFEK-VEGVHEVVSGYTGGTVKNPTYKQVVGGGTGHYEAVE 88 Query 57 IEYDPNLTTVALLIEYAYRNMDP 79 I YDP + L + +R++DP Sbjct 89 IMYDPAKVSARQLYDLFFRSVDP 111 >ref|NP_387174.1| peptide methionine sulfoxide reductase [Sinorhizobium meliloti 1021] ref|YP_004550442.1| peptide methionine sulfoxide reductase MsrA [Sinorhizobium meliloti AK83] sp|Q92LI5.1|MSRA2_RHIME RecName: Full=Peptide methionine sulfoxide reductase MsrA 2; Short=Protein-methionine-S-oxide reductase 2; AltName: Full=Peptide-methionine (S)-S-oxide reductase 2; Short=Peptide Met(O) reductase 2 emb|CAC47647.1| Probable peptide methionine sulfoxide reductase MsrA 2 [Sinorhizobium meliloti 1021] gb|AEG05792.1| Peptide methionine sulfoxide reductase msrA [Sinorhizobium meliloti BL225C] gb|AEG54828.1| Peptide methionine sulfoxide reductase msrA [Sinorhizobium meliloti AK83] gb|AEH80484.1| probabable peptide methionine sulfoxide reductase msrA 2 [Sinorhizobium meliloti SM11] Length=198 Score = 74.3 bits (181), Expect = 1e-15, Method: Compositional matrix adjust. Identities = 34/74 (46%), Positives = 49/74 (66%), Gaps = 3/74 (4%) Query 8 VVALGCFWCAEQAFEQYVPGVVEAVSGYAGGTNDNPSYRDHP--GHYEVILIEYDPNLTT 65 + A GCFWC E F+ VPGV+E +SGYAGG + NP+Y D+ GH EV+ +++DP+ + Sbjct 27 IFAGGCFWCVESDFDA-VPGVLETISGYAGGKSANPTYEDYAKGGHREVVRVKFDPDRVS 85 Query 66 VALLIEYAYRNMDP 79 A L+ +R DP Sbjct 86 YAELVGVLFRTTDP 99 >gb|EHK76210.1| peptide methionine sulfoxide reductase [Sinorhizobium meliloti CCNWSX0020] Length=198 Score = 74.3 bits (181), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 34/74 (46%), Positives = 49/74 (66%), Gaps = 3/74 (4%) Query 8 VVALGCFWCAEQAFEQYVPGVVEAVSGYAGGTNDNPSYRDHP--GHYEVILIEYDPNLTT 65 + A GCFWC E F+ VPGV+E +SGYAGG + NP+Y D+ GH EV+ +++DP+ + Sbjct 27 IFAGGCFWCVESDFDA-VPGVLETISGYAGGKSANPTYEDYAKGGHREVVRVKFDPDRVS 85 Query 66 VALLIEYAYRNMDP 79 A L+ +R DP Sbjct 86 YAELVGVLFRTTDP 99 >ref|YP_001009923.1| unnamed protein product [Prochlorococcus marinus str. AS9601] gb|ABM70816.1| Peptide methionine sulfoxide reductase [Prochlorococcus marinus str. AS9601] Length=200 Score = 74.3 bits (181), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 33/73 (45%), Positives = 48/73 (66%), Gaps = 1/73 (1%) Query 7 LVVALGCFWCAEQAFEQYVPGVVEAVSGYAGGTNDNPSYRDHPGHYEVILIEYDPNLTTV 66 L++A GCFWC E E + G+ SGY+GG NP+Y +H G+ EV+LI+YD NL T+ Sbjct 25 LILAGGCFWCLEHDLES-LKGINFVQSGYSGGDLQNPTYENHEGYQEVVLIDYDSNLVTL 83 Query 67 ALLIEYAYRNMDP 79 ++ +RN+DP Sbjct 84 PEILRLYFRNIDP 96 >ref|YP_376571.1| methionine sulfoxide reductase A [Synechococcus sp. CC9902] gb|ABB25527.1| Methionine sulfoxide reductase A [Synechococcus sp. CC9902] Length=212 Score = 74.3 bits (181), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 34/83 (41%), Positives = 52/83 (63%), Gaps = 5/83 (6%) Query 1 ADGNKSLVVALGCFWCAEQAFEQYVPGVVEAVSGYAGGTNDNPSYR----DHPGHYEVIL 56 A ++ V A GCFWC E E ++PGV++A+SGY+GG D P+YR + GH E + Sbjct 22 AAAEQTAVFAGGCFWCLEHDLE-HLPGVIDAISGYSGGHVDQPTYRQVSGEDTGHQEAVQ 80 Query 57 IEYDPNLTTVALLIEYAYRNMDP 79 + +DP L + + L+ +RN+DP Sbjct 81 VRFDPALISYSTLLRSYWRNVDP 103 >ref|NP_896655.1| peptide methionine sulfoxide reductase MsrA [Synechococcus sp. WH 8102] emb|CAE07075.1| peptide methionine sulfoxide reductase MsrA [Synechococcus sp. WH 8102] Length=213 Score = 74.3 bits (181), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 36/80 (45%), Positives = 49/80 (61%), Gaps = 5/80 (6%) Query 4 NKSLVVALGCFWCAEQAFEQYVPGVVEAVSGYAGGTNDNPSYR----DHPGHYEVILIEY 59 ++ V A GCFWC E E + PGV+EA SGY+GG DNP+YR + GH EV+ + + Sbjct 23 TETAVFAGGCFWCLEHDLEDH-PGVLEATSGYSGGHVDNPTYRQVSAETTGHQEVVEVRF 81 Query 60 DPNLTTVALLIEYAYRNMDP 79 DP T L+ +RN+DP Sbjct 82 DPTEITYGTLLRSYWRNVDP 101 >gb|ADP99713.1| bifunctional methionine sulfoxide reductase A/B protein [Marinobacter adhaerens HP15] Length=407 Score = 76.3 bits (186), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 36/76 (47%), Positives = 46/76 (61%), Gaps = 4/76 (5%) Query 8 VVALGCFWCAEQAFEQYVPGVVEAVSGYAGGTNDNPSYRD----HPGHYEVILIEYDPNL 63 A GCFWC E +E+ VPGVVE VSGY+GG +PSY+ GH E + + YDPN Sbjct 48 TFAGGCFWCVEAGYEKRVPGVVEVVSGYSGGKEASPSYKQVASGQTGHTEAVQVYYDPNE 107 Query 64 TTVALLIEYAYRNMDP 79 T L++ +R MDP Sbjct 108 MTYEGLLQALWRMMDP 123 >ref|ZP_09162129.1| methionine-R-sulfoxide reductase [Marinobacter sp. MnI7-9] gb|EHJ02697.1| methionine-R-sulfoxide reductase [Marinobacter sp. MnI7-9] Length=407 Score = 76.3 bits (186), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 36/76 (47%), Positives = 46/76 (61%), Gaps = 4/76 (5%) Query 8 VVALGCFWCAEQAFEQYVPGVVEAVSGYAGGTNDNPSYRD----HPGHYEVILIEYDPNL 63 A GCFWC E +E+ VPGVVE VSGY+GG +PSY+ GH E + + YDPN Sbjct 48 TFAGGCFWCVEAGYEKRVPGVVEVVSGYSGGKEASPSYKQVASGQTGHTEAVQVYYDPNE 107 Query 64 TTVALLIEYAYRNMDP 79 T L++ +R MDP Sbjct 108 MTYEGLLQALWRMMDP 123 >ref|YP_119435.1| methionine sulfoxide reductase A [Nocardia farcinica IFM 10152] sp|Q5YUS0.1|MSRA_NOCFA RecName: Full=Peptide methionine sulfoxide reductase MsrA; Short=Protein-methionine-S-oxide reductase; AltName: Full=Peptide-methionine (S)-S-oxide reductase; Short=Peptide Met(O) reductase dbj|BAD58071.1| putative peptide methionine sulfoxide reductase [Nocardia farcinica IFM 10152] Length=170 Score = 73.2 bits (178), Expect = 2e-15, Method: Compositional matrix adjust. Identities = 33/76 (43%), Positives = 46/76 (61%), Gaps = 1/76 (1%) Query 4 NKSLVVALGCFWCAEQAFEQYVPGVVEAVSGYAGGTNDNPSYRDHPGHYEVILIEYDPNL 63 + ++A GCFW + + PGVV GY GGTND+P+YR+HPGH E + I YDP Sbjct 4 TRRAILAGGCFWGMQDLIRRQ-PGVVSTRVGYTGGTNDHPTYRNHPGHAEAVEIVYDPER 62 Query 64 TTVALLIEYAYRNMDP 79 T L+E+ ++ DP Sbjct 63 TDYRALLEFFFQIHDP 78 >ref|ZP_09084907.1| methionine sulfoxide reductase A [Mycobacterium thermoresistibile ATCC 19527] gb|EHI10690.1| methionine sulfoxide reductase A [Mycobacterium thermoresistibile ATCC 19527] Length=172 Score = 73.2 bits (178), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 34/75 (45%), Positives = 46/75 (61%), Gaps = 1/75 (1%) Query 5 KSLVVALGCFWCAEQAFEQYVPGVVEAVSGYAGGTNDNPSYRDHPGHYEVILIEYDPNLT 64 K ++A GCFW ++ + PGVV GY GG ND+P+YR+HPGH E I I YDP T Sbjct 5 KKAILAGGCFWGMQELIRKQ-PGVVSTRVGYTGGENDHPTYRNHPGHAEAIEIVYDPAQT 63 Query 65 TVALLIEYAYRNMDP 79 L+E+ ++ DP Sbjct 64 DYRTLLEFFFQIHDP 78 >ref|YP_001551272.1| peptide methionine sulfoxide reductase [Prochlorococcus marinus str. MIT 9211] gb|ABX09318.1| Peptide methionine sulfoxide reductase [Prochlorococcus marinus str. MIT 9211] Length=211 Score = 73.9 bits (180), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 30/72 (42%), Positives = 45/72 (63%), Gaps = 1/72 (1%) Query 8 VVALGCFWCAEQAFEQYVPGVVEAVSGYAGGTNDNPSYRDHPGHYEVILIEYDPNLTTVA 67 V+A GCFWC E E+ +PG++ SGY GG NP+Y++H GH E +++E+D Sbjct 35 VLAGGCFWCLEHDLEE-LPGILSVESGYTGGNLQNPTYKNHKGHQEAVIVEFDTKKIAFD 93 Query 68 LLIEYAYRNMDP 79 L+ +RN+DP Sbjct 94 KLLRSYWRNIDP 105 >ref|YP_183232.1| bifunctional methionine sulfoxide reductase A/B [Thermococcus kodakarensis KOD1] dbj|BAD85008.1| peptide methionine sulfoxide reductase [Thermococcus kodakarensis KOD1] Length=338 Score = 75.5 bits (184), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 35/79 (44%), Positives = 52/79 (66%), Gaps = 5/79 (6%) Query 5 KSLVVALGCFWCAEQAFEQYVPGVVEAVSGYAGGTNDNPSYR----DHPGHYEVILIEYD 60 K+ + A GCFWC E+AFE+ +PGV+EA+SGY GG +NP+Y GH E + + YD Sbjct 9 KTAIFAGGCFWCMEEAFER-LPGVIEAISGYTGGWVENPTYELVSTGETGHREAVKVIYD 67 Query 61 PNLTTVALLIEYAYRNMDP 79 P+ + L++ +RN+DP Sbjct 68 PSKISYERLLDVFWRNIDP 86 >ref|YP_001073725.1| methionine sulfoxide reductase A [Mycobacterium sp. JLS] sp|A3Q7V7.1|MSRA_MYCSJ RecName: Full=Peptide methionine sulfoxide reductase MsrA; Short=Protein-methionine-S-oxide reductase; AltName: Full=Peptide-methionine (S)-S-oxide reductase; Short=Peptide Met(O) reductase gb|ABO01235.1| peptide methionine sulfoxide reductase [Mycobacterium sp. JLS] Length=171 Score = 72.8 bits (177), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 34/76 (45%), Positives = 46/76 (61%), Gaps = 1/76 (1%) Query 4 NKSLVVALGCFWCAEQAFEQYVPGVVEAVSGYAGGTNDNPSYRDHPGHYEVILIEYDPNL 63 +K ++A GCFW + + PGVV GY GG ND+P+YR+HPGH E I I YDP Sbjct 4 HKKAILAGGCFWGMQDLIRKQ-PGVVSTRVGYTGGQNDHPTYRNHPGHAESIEITYDPAQ 62 Query 64 TTVALLIEYAYRNMDP 79 T L+E+ ++ DP Sbjct 63 TDYRALLEFFFQIHDP 78 >ref|YP_642252.1| methionine sulfoxide reductase A [Mycobacterium sp. MCS] ref|YP_941159.1| methionine sulfoxide reductase A [Mycobacterium sp. KMS] sp|Q1B1N8.1|MSRA_MYCSS RecName: Full=Peptide methionine sulfoxide reductase MsrA; Short=Protein-methionine-S-oxide reductase; AltName: Full=Peptide-methionine (S)-S-oxide reductase; Short=Peptide Met(O) reductase sp|A1UNG1.1|MSRA_MYCSK RecName: Full=Peptide methionine sulfoxide reductase MsrA; Short=Protein-methionine-S-oxide reductase; AltName: Full=Peptide-methionine (S)-S-oxide reductase; Short=Peptide Met(O) reductase gb|ABG11196.1| peptide methionine sulfoxide reductase [Mycobacterium sp. MCS] gb|ABL94369.1| peptide methionine sulfoxide reductase [Mycobacterium sp. KMS] Length=171 Score = 72.8 bits (177), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 34/76 (45%), Positives = 46/76 (61%), Gaps = 1/76 (1%) Query 4 NKSLVVALGCFWCAEQAFEQYVPGVVEAVSGYAGGTNDNPSYRDHPGHYEVILIEYDPNL 63 +K ++A GCFW + + PGVV GY GG ND+P+YR+HPGH E I I YDP Sbjct 4 HKKAILAGGCFWGMQDLIRKQ-PGVVSTRVGYTGGQNDHPTYRNHPGHAESIEITYDPAQ 62 Query 64 TTVALLIEYAYRNMDP 79 T L+E+ ++ DP Sbjct 63 TDYRALLEFFFQIHDP 78 >ref|ZP_01893346.1| peptide methionine sulfoxide reductase [Marinobacter algicola DG893] gb|EDM48735.1| peptide methionine sulfoxide reductase [Marinobacter algicola DG893] Length=406 Score = 75.9 bits (185), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 35/76 (46%), Positives = 48/76 (63%), Gaps = 4/76 (5%) Query 8 VVALGCFWCAEQAFEQYVPGVVEAVSGYAGGTNDNPSYRD----HPGHYEVILIEYDPNL 63 A GCFWC E A+E+ VPGVVEAVSGY+GG NP+Y+ GH E + + YDP++ Sbjct 42 TFAGGCFWCVEAAYEEKVPGVVEAVSGYSGGDEKNPNYKQVAGGRTGHTEAVQVYYDPDV 101 Query 64 TTVALLIEYAYRNMDP 79 T L++ +R +P Sbjct 102 ITYEGLLQGLWRTANP 117 >ref|ZP_01441677.1| methionine-S-sulfoxide reductase [Pelagibaca bermudensis HTCC2601] gb|EAU48236.1| methionine-S-sulfoxide reductase [Roseovarius sp. HTCC2601] Length=215 Score = 73.9 bits (180), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 37/80 (46%), Positives = 48/80 (60%), Gaps = 5/80 (6%) Query 4 NKSLVVALGCFWCAEQAFEQYVPGVVEAVSGYAGGTNDNPSY----RDHPGHYEVILIEY 59 + +VVA GCFWC E FE+ V GV+ AVSGY GGT NP+Y R GHYE + I Y Sbjct 27 RRDIVVAGGCFWCVEADFEK-VRGVLGAVSGYTGGTTANPTYKEVSRGGTGHYEAVKITY 85 Query 60 DPNLTTVALLIEYAYRNMDP 79 D + L + +R++DP Sbjct 86 DSAQVSAGQLYDMFFRSVDP 105 >ref|YP_002827621.1| methionine sulfoxide reductase [Sinorhizobium fredii NGR234] gb|ACP26868.1| methionine sulfoxide reductase [Sinorhizobium fredii NGR234] Length=198 Score = 73.6 bits (179), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 34/74 (46%), Positives = 48/74 (65%), Gaps = 3/74 (4%) Query 8 VVALGCFWCAEQAFEQYVPGVVEAVSGYAGGTNDNPSYRDH--PGHYEVILIEYDPNLTT 65 + A GCFWC E F+ V GV+E +SGYAGG NP+Y+D+ GH EV+ I++DP+ + Sbjct 27 IFAGGCFWCVESDFDD-VSGVLETISGYAGGKTKNPTYKDYAKAGHREVVRIKFDPDKIS 85 Query 66 VALLIEYAYRNMDP 79 A L+ +R DP Sbjct 86 YAELVGVLFRTTDP 99 >ref|YP_004870234.1| msrAB gene product [Glaciecola nitratireducens FR1064] gb|AEP28241.1| peptide methionine sulfoxide reductase [Glaciecola nitratireducens FR1064] Length=390 Score = 75.5 bits (184), Expect = 3e-15, Method: Compositional matrix adjust. Identities = 40/86 (47%), Positives = 52/86 (60%), Gaps = 8/86 (9%) Query 1 ADGNKSLVVAL---GCFWCAEQAFEQYVPGVVEAVSGYAGGTNDNPSYRD----HPGHYE 53 A + SL VA GCFWC E FE+ +PGVVE VSGY+GGT NP+Y+ GH E Sbjct 35 APADSSLAVATFAGGCFWCVEAGFEK-IPGVVETVSGYSGGTEKNPNYKQVASGATGHTE 93 Query 54 VILIEYDPNLTTVALLIEYAYRNMDP 79 + + YD N+ T L++ +R MDP Sbjct 94 AVQVYYDANIITYEGLLQGLWRMMDP 119 >ref|ZP_05721494.1| peptide methionine sulfoxide reductase [Vibrio mimicus VM603] gb|EEW05944.1| peptide methionine sulfoxide reductase [Vibrio mimicus VM603] Length=380 Score = 75.5 bits (184), Expect = 4e-15, Method: Composition-based stats. Identities = 35/82 (43%), Positives = 52/82 (63%), Gaps = 5/82 (6%) Query 2 DGNKSLVVALGCFWCAEQAFEQYVPGVVEAVSGYAGGTNDNPSYRD----HPGHYEVILI 57 DG + +A GCFWC E E+ +PGVV+ VSGYAGG DNP+Y+ GH EVI + Sbjct 39 DGYQQATLAGGCFWCTESDMEK-LPGVVDVVSGYAGGHVDNPTYKQVSSGKTGHIEVIQV 97 Query 58 EYDPNLTTVALLIEYAYRNMDP 79 +DP + + +++ +R++DP Sbjct 98 TFDPKIVSYEQVLDQFFRHIDP 119 >ref|ZP_00961811.1| methionine-S-sulfoxide reductase [Sulfitobacter sp. NAS-14.1] gb|EAP81225.1| methionine-S-sulfoxide reductase [Sulfitobacter sp. NAS-14.1] Length=221 Score = 73.6 bits (179), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 36/77 (47%), Positives = 48/77 (62%), Gaps = 5/77 (6%) Query 7 LVVALGCFWCAEQAFEQYVPGVVEAVSGYAGGTNDNPSYRD----HPGHYEVILIEYDPN 62 L+VA GCFWC E FE V GV E VSG+AGG+ NP+Y+ GHYE I+YDP Sbjct 35 LLVAGGCFWCVEADFES-VKGVKEVVSGFAGGSVKNPTYKQVVAGGTGHYEAAQIQYDPA 93 Query 63 LTTVALLIEYAYRNMDP 79 + + L+ +R++DP Sbjct 94 VVSADQLLSMFFRSVDP 110 >ref|ZP_06031940.1| peptide methionine sulfoxide reductase [Vibrio mimicus VM223] gb|EEY45249.1| peptide methionine sulfoxide reductase [Vibrio mimicus VM223] Length=378 Score = 75.5 bits (184), Expect = 4e-15, Method: Composition-based stats. Identities = 35/82 (43%), Positives = 52/82 (63%), Gaps = 5/82 (6%) Query 2 DGNKSLVVALGCFWCAEQAFEQYVPGVVEAVSGYAGGTNDNPSYRD----HPGHYEVILI 57 DG + +A GCFWC E E+ +PGVV+ VSGYAGG DNP+Y+ GH EVI + Sbjct 37 DGYQQATLAGGCFWCTESDMEK-LPGVVDVVSGYAGGHVDNPTYKQVSSGKTGHIEVIQV 95 Query 58 EYDPNLTTVALLIEYAYRNMDP 79 +DP + + +++ +R++DP Sbjct 96 TFDPKIVSYEQVLDQFFRHIDP 117 >ref|YP_956480.1| methionine sulfoxide reductase A [Mycobacterium vanbaalenii PYR-1] sp|A1TH24.1|MSRA_MYCVP RecName: Full=Peptide methionine sulfoxide reductase MsrA; Short=Protein-methionine-S-oxide reductase; AltName: Full=Peptide-methionine (S)-S-oxide reductase; Short=Peptide Met(O) reductase gb|ABM16474.1| peptide methionine sulfoxide reductase [Mycobacterium vanbaalenii PYR-1] Length=169 Score = 72.4 bits (176), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 35/76 (46%), Positives = 46/76 (61%), Gaps = 1/76 (1%) Query 4 NKSLVVALGCFWCAEQAFEQYVPGVVEAVSGYAGGTNDNPSYRDHPGHYEVILIEYDPNL 63 +K V+A GCFW + + PGVV GY GG ND+P+YR+HPGH E I I YDP Sbjct 4 HKRAVLAGGCFWGMQDLIRKQ-PGVVSTRVGYTGGQNDHPTYRNHPGHAEAIEIVYDPAQ 62 Query 64 TTVALLIEYAYRNMDP 79 T L+E+ ++ DP Sbjct 63 TDYRALLEFFFQIHDP 78 >ref|YP_001132375.1| methionine sulfoxide reductase A [Mycobacterium gilvum PYR-GCK] ref|YP_004079444.1| methionine-S-sulfoxide reductase [Mycobacterium sp. Spyr1] sp|A4T413.1|MSRA_MYCGI RecName: Full=Peptide methionine sulfoxide reductase MsrA; Short=Protein-methionine-S-oxide reductase; AltName: Full=Peptide-methionine (S)-S-oxide reductase; Short=Peptide Met(O) reductase gb|ABP43587.1| peptide methionine sulfoxide reductase [Mycobacterium gilvum PYR-GCK] gb|ADU01610.1| methionine-S-sulfoxide reductase [Mycobacterium sp. Spyr1] Length=169 Score = 72.4 bits (176), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 35/76 (46%), Positives = 46/76 (61%), Gaps = 1/76 (1%) Query 4 NKSLVVALGCFWCAEQAFEQYVPGVVEAVSGYAGGTNDNPSYRDHPGHYEVILIEYDPNL 63 +K V+A GCFW + + PGVV GY GG ND+P+YR+HPGH E I I YDP Sbjct 4 HKRAVLAGGCFWGMQDLIRKQ-PGVVSTRVGYTGGQNDHPTYRNHPGHAEAIEIVYDPAQ 62 Query 64 TTVALLIEYAYRNMDP 79 T L+E+ ++ DP Sbjct 63 TDYRALLEFFFQIHDP 78 >ref|ZP_00954502.1| methionine-S-sulfoxide reductase [Sulfitobacter sp. EE-36] gb|EAP85735.1| methionine-S-sulfoxide reductase [Sulfitobacter sp. EE-36] Length=221 Score = 73.6 bits (179), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 36/77 (47%), Positives = 48/77 (62%), Gaps = 5/77 (6%) Query 7 LVVALGCFWCAEQAFEQYVPGVVEAVSGYAGGTNDNPSYRD----HPGHYEVILIEYDPN 62 L+VA GCFWC E FE V GV E VSG+AGG+ NP+Y+ GHYE I+YDP Sbjct 35 LLVAGGCFWCVEADFES-VKGVKEVVSGFAGGSVKNPTYKQVVAGGTGHYEAAQIQYDPA 93 Query 63 LTTVALLIEYAYRNMDP 79 + + L+ +R++DP Sbjct 94 VVSADQLLSMFFRSVDP 110 >ref|YP_001328619.1| peptide methionine sulfoxide reductase [Sinorhizobium medicae WSM419] gb|ABR61784.1| peptide methionine sulfoxide reductase [Sinorhizobium medicae WSM419] Length=198 Score = 73.2 bits (178), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 34/74 (46%), Positives = 48/74 (65%), Gaps = 3/74 (4%) Query 8 VVALGCFWCAEQAFEQYVPGVVEAVSGYAGGTNDNPSYRDH--PGHYEVILIEYDPNLTT 65 + A GCFWC E F+ VPGV+E +SGYAGG + NP+Y + GH EV+ I++DP+ + Sbjct 27 IFAGGCFWCVESDFDA-VPGVLETISGYAGGKSANPTYETYVRGGHREVVRIKFDPDRVS 85 Query 66 VALLIEYAYRNMDP 79 A L+ +R DP Sbjct 86 FAALVGVLFRTTDP 99 >gb|ABE11408.1| peptide methionine sulfoxide reductase [uncultured Prochlorococcus marinus clone HOT0M-1A11] Length=200 Score = 73.2 bits (178), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 32/75 (43%), Positives = 48/75 (64%), Gaps = 1/75 (1%) Query 5 KSLVVALGCFWCAEQAFEQYVPGVVEAVSGYAGGTNDNPSYRDHPGHYEVILIEYDPNLT 64 + LV+A GCFWC E E + G+ SGY+GG NP+Y +H GH EV+L++YD L Sbjct 23 EELVLAGGCFWCLEHDLES-LKGINFVQSGYSGGNLQNPTYENHDGHQEVVLVDYDSQLL 81 Query 65 TVALLIEYAYRNMDP 79 + +++ +RN+DP Sbjct 82 ALPEILKLYFRNIDP 96 >ref|ZP_01468497.1| Methionine sulfoxide reductase A [Synechococcus sp. BL107] gb|EAU72390.1| Methionine sulfoxide reductase A [Synechococcus sp. BL107] Length=199 Score = 73.2 bits (178), Expect = 4e-15, Method: Compositional matrix adjust. Identities = 34/83 (41%), Positives = 52/83 (63%), Gaps = 5/83 (6%) Query 1 ADGNKSLVVALGCFWCAEQAFEQYVPGVVEAVSGYAGGTNDNPSYR----DHPGHYEVIL 56 A ++ V A GCFWC E E ++PGV++AVSGY+GG D P+YR + GH E + Sbjct 9 AAAEQTAVFAGGCFWCLEHDLE-HLPGVIDAVSGYSGGHVDQPTYRQVSGEDTGHQEAVQ 67 Query 57 IEYDPNLTTVALLIEYAYRNMDP 79 + +DP + + + L+ +RN+DP Sbjct 68 VRFDPAVISYSTLLRSYWRNVDP 90 >gb|EHB55286.1| Peptide methionine sulfoxide reductase msrA [Mycobacterium rhodesiae JS60] Length=169 Score = 72.0 bits (175), Expect = 5e-15, Method: Compositional matrix adjust. Identities = 34/76 (45%), Positives = 45/76 (59%), Gaps = 1/76 (1%) Query 4 NKSLVVALGCFWCAEQAFEQYVPGVVEAVSGYAGGTNDNPSYRDHPGHYEVILIEYDPNL 63 K ++A GCFW + + PGVV GY GG ND+P+YR+HPGH E I I YDP Sbjct 4 TKRAILAGGCFWGMQDLIRKQ-PGVVTTRVGYTGGQNDHPTYRNHPGHAEAIEIVYDPAQ 62 Query 64 TTVALLIEYAYRNMDP 79 T L+E+ ++ DP Sbjct 63 TDFRALLEFFFQIHDP 78 >ref|YP_340099.1| peptide methionine sulfoxide reductase MsrA [Pseudoalteromonas haloplanktis TAC125] emb|CAI86656.1| Peptide methionine sulfoxide reductase msrA 2 (Protein-methionine-S-oxide reductase 2) (Peptide Met(O) reductase 2) [Pseudoalteromonas haloplanktis TAC125] Length=233 Score = 73.6 bits (179), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 33/80 (41%), Positives = 51/80 (64%), Gaps = 2/80 (3%) Query 1 ADGNKSLVVALGCFWCAEQAFEQYVPGVVEAVSGYAGGTNDNPSYR-DHPGHYEVILIEY 59 A+ + V+A GCFWC E FE+ + GV + +SG+ GG NP+Y +H GHYE + I Y Sbjct 56 ANKTEKAVLAGGCFWCMESDFEK-LAGVTDVISGFTGGKLKNPTYNGNHRGHYEAVEITY 114 Query 60 DPNLTTVALLIEYAYRNMDP 79 DP + + ++E+ + N+DP Sbjct 115 DPAIVSYKAILEHYWVNIDP 134 >ref|ZP_01259519.1| bifunctional methionine sulfoxide reductase A/B protein [Vibrio alginolyticus 12G01] ref|ZP_06179604.1| peptide methionine sulfoxide reductase [Vibrio alginolyticus 40B] gb|EAS77433.1| bifunctional methionine sulfoxide reductase A/B protein [Vibrio alginolyticus 12G01] gb|EEZ84080.1| peptide methionine sulfoxide reductase [Vibrio alginolyticus 40B] Length=380 Score = 74.7 bits (182), Expect = 6e-15, Method: Composition-based stats. Identities = 34/83 (41%), Positives = 53/83 (64%), Gaps = 5/83 (6%) Query 1 ADGNKSLVVALGCFWCAEQAFEQYVPGVVEAVSGYAGGTNDNPSYRD----HPGHYEVIL 56 ++ + +A GCFWC E EQ +PGV++ VSGY+GG +NP+YR GH EVI Sbjct 37 SENTRIATLAGGCFWCTESDLEQ-LPGVIDVVSGYSGGHIENPTYRQVSSGKSGHIEVIE 95 Query 57 IEYDPNLTTVALLIEYAYRNMDP 79 ++YDP + +++Y +R++DP Sbjct 96 VKYDPAVVNYEQVLDYFFRHIDP 118 >ref|ZP_05051727.1| Peptide methionine sulfoxide reductase superfamily [Octadecabacter antarcticus 307] gb|EDY77993.1| Peptide methionine sulfoxide reductase superfamily [Octadecabacter antarcticus 307] Length=218 Score = 73.2 bits (178), Expect = 6e-15, Method: Compositional matrix adjust. Identities = 34/79 (43%), Positives = 47/79 (59%), Gaps = 5/79 (6%) Query 5 KSLVVALGCFWCAEQAFEQYVPGVVEAVSGYAGGTNDNPSYRD----HPGHYEVILIEYD 60 +++ VA GCFWC E FE+ V GV E SGY GT DNP+YR GHYE + I YD Sbjct 31 QTITVAGGCFWCVESDFEK-VTGVAEVTSGYTDGTTDNPTYRQVTGGGTGHYEAVQISYD 89 Query 61 PNLTTVALLIEYAYRNMDP 79 + + + + +R++DP Sbjct 90 TDQVSARQIYDLFFRSVDP 108 >ref|ZP_06041485.1| peptide methionine sulfoxide reductase [Vibrio mimicus MB-451] gb|EEY37153.1| peptide methionine sulfoxide reductase [Vibrio mimicus MB-451] Length=378 Score = 74.7 bits (182), Expect = 6e-15, Method: Composition-based stats. Identities = 35/82 (43%), Positives = 51/82 (62%), Gaps = 5/82 (6%) Query 2 DGNKSLVVALGCFWCAEQAFEQYVPGVVEAVSGYAGGTNDNPSYRD----HPGHYEVILI 57 DG + +A GCFWC E E+ +PGVV+ VSGYAGG DNP+Y+ GH EVI + Sbjct 37 DGYQQATLAGGCFWCTESDMEK-LPGVVDVVSGYAGGHVDNPTYKQVSSGKTGHIEVIQV 95 Query 58 EYDPNLTTVALLIEYAYRNMDP 79 +DP + +++ +R++DP Sbjct 96 TFDPKIVNYEQVLDQFFRHIDP 117 >ref|ZP_05717698.1| peptide methionine sulfoxide reductase [Vibrio mimicus VM573] gb|EEW09784.1| peptide methionine sulfoxide reductase [Vibrio mimicus VM573] gb|EGU17859.1| peptide methionine sulfoxide reductase [Vibrio mimicus SX-4] Length=378 Score = 74.7 bits (182), Expect = 7e-15, Method: Composition-based stats. Identities = 35/82 (43%), Positives = 51/82 (62%), Gaps = 5/82 (6%) Query 2 DGNKSLVVALGCFWCAEQAFEQYVPGVVEAVSGYAGGTNDNPSYRD----HPGHYEVILI 57 DG + +A GCFWC E E+ +PGVV+ VSGYAGG DNP+Y+ GH EVI + Sbjct 37 DGYQQATLAGGCFWCTESDMEK-LPGVVDVVSGYAGGHVDNPTYKQVSSGKTGHIEVIQV 95 Query 58 EYDPNLTTVALLIEYAYRNMDP 79 +DP + +++ +R++DP Sbjct 96 TFDPKIVNYEQVLDQFFRHIDP 117 >ref|ZP_01984405.1| peptide methionine sulfoxide reductase MsrA/msrB [Vibrio harveyi HY01] gb|EDL71065.1| peptide methionine sulfoxide reductase MsrA/msrB [Vibrio harveyi HY01] Length=380 Score = 74.7 bits (182), Expect = 7e-15, Method: Composition-based stats. Identities = 34/75 (45%), Positives = 51/75 (68%), Gaps = 5/75 (7%) Query 9 VALGCFWCAEQAFEQYVPGVVEAVSGYAGGTNDNPSYRD----HPGHYEVILIEYDPNLT 64 +A GCFWC E EQ +PGV++ VSGY+GG +NP+YR GH EVI ++YDP + Sbjct 45 LAGGCFWCTESDLEQ-LPGVLDVVSGYSGGDLENPTYRQVSSGKSGHIEVIEVKYDPAVV 103 Query 65 TVALLIEYAYRNMDP 79 + +++Y +R++DP Sbjct 104 SYEQVLDYFFRHIDP 118 >ref|ZP_09311124.1| methionine sulfoxide reductase A [Rhodococcus pyridinivorans AK37] gb|EHK81214.1| methionine sulfoxide reductase A [Rhodococcus pyridinivorans AK37] Length=173 Score = 72.0 bits (175), Expect = 7e-15, Method: Compositional matrix adjust. Identities = 33/76 (43%), Positives = 47/76 (62%), Gaps = 1/76 (1%) Query 4 NKSLVVALGCFWCAEQAFEQYVPGVVEAVSGYAGGTNDNPSYRDHPGHYEVILIEYDPNL 63 ++ ++A GCFW E+ + PGVV GY GG ND+P+YR+HPGH E + I YDP Sbjct 4 TRNAILAGGCFWGMEELIRRQ-PGVVSTRVGYTGGQNDHPTYRNHPGHAESVEIVYDPAR 62 Query 64 TTVALLIEYAYRNMDP 79 T L+E+ ++ DP Sbjct 63 TDYRALLEFFFQIHDP 78 >ref|YP_001448804.1| peptide methionine sulfoxide reductase [Vibrio harveyi ATCC BAA-1116] gb|ABU74577.1| hypothetical protein VIBHAR_06690 [Vibrio harveyi ATCC BAA-1116] Length=380 Score = 74.7 bits (182), Expect = 7e-15, Method: Composition-based stats. Identities = 34/75 (45%), Positives = 50/75 (67%), Gaps = 5/75 (7%) Query 9 VALGCFWCAEQAFEQYVPGVVEAVSGYAGGTNDNPSYRD----HPGHYEVILIEYDPNLT 64 +A GCFWC E EQ +PGV++ VSGY+GG +NP+YR GH EVI ++YDP + Sbjct 45 LAGGCFWCTESDLEQ-LPGVLDVVSGYSGGDLENPTYRQVSSGKSGHIEVIEVKYDPAVV 103 Query 65 TVALLIEYAYRNMDP 79 +++Y +R++DP Sbjct 104 NYEQVLDYFFRHIDP 118 >ref|ZP_06175696.1| peptide methionine sulfoxide reductase [Vibrio harveyi 1DA3] gb|EEZ87976.1| peptide methionine sulfoxide reductase [Vibrio harveyi 1DA3] Length=386 Score = 74.3 bits (181), Expect = 8e-15, Method: Composition-based stats. Identities = 34/75 (45%), Positives = 50/75 (67%), Gaps = 5/75 (7%) Query 9 VALGCFWCAEQAFEQYVPGVVEAVSGYAGGTNDNPSYRD----HPGHYEVILIEYDPNLT 64 +A GCFWC E EQ +PGV++ VSGY+GG +NP+YR GH EVI ++YDP + Sbjct 51 LAGGCFWCTESDLEQ-LPGVLDVVSGYSGGDLENPTYRQVSSGKSGHIEVIEVKYDPAIV 109 Query 65 TVALLIEYAYRNMDP 79 +++Y +R++DP Sbjct 110 NYEQVLDYFFRHIDP 124 >ref|NP_875805.1| msrA gene product [Prochlorococcus marinus subsp. marinus str. CCMP1375] gb|AAQ00458.1| Peptide methionine sulfoxide reductase [Prochlorococcus marinus subsp. marinus str. CCMP1375] Length=212 Score = 72.4 bits (176), Expect = 8e-15, Method: Compositional matrix adjust. Identities = 34/76 (45%), Positives = 45/76 (59%), Gaps = 1/76 (1%) Query 4 NKSLVVALGCFWCAEQAFEQYVPGVVEAVSGYAGGTNDNPSYRDHPGHYEVILIEYDPNL 63 N S V A GCFWC E FE + GV+ SGY GG P+Y++H GH E I I +DP Sbjct 31 NDSAVFAGGCFWCLEHDFES-LKGVLSVESGYTGGKTIKPTYKNHKGHQEAIKITFDPLE 89 Query 64 TTVALLIEYAYRNMDP 79 + L++ +RN+DP Sbjct 90 VSFEELLKTYWRNIDP 105 >ref|YP_460304.1| peptide methionine sulfoxide reductase [Syntrophus aciditrophicus SB] gb|ABC76136.1| peptide methionine sulfoxide reductase [Syntrophus aciditrophicus SB] Length=362 Score = 74.3 bits (181), Expect = 9e-15, Method: Composition-based stats. Identities = 33/72 (46%), Positives = 48/72 (67%), Gaps = 3/72 (4%) Query 10 ALGCFWCAEQAFEQYVPGVVEAVSGYAGGTNDNPSYRDHP--GHYEVILIEYDPNLTTVA 67 A GCFWC + FE+ +PG+V+ VSGYAGGT D P+Y ++ GH E + I +DP T Sbjct 43 AGGCFWCLQADFEK-IPGIVKVVSGYAGGTEDRPTYENYSRTGHVEAVQITFDPRKITYG 101 Query 68 LLIEYAYRNMDP 79 L++ +R++DP Sbjct 102 QLLDVFWRHIDP 113 >ref|ZP_05067199.1| methionine-S-sulfoxide reductase [Octadecabacter antarcticus 238] gb|EDY92438.1| methionine-S-sulfoxide reductase [Octadecabacter antarcticus 238] Length=112 Score = 70.1 bits (170), Expect = 9e-15, Method: Compositional matrix adjust. Identities = 33/79 (42%), Positives = 46/79 (58%), Gaps = 5/79 (6%) Query 5 KSLVVALGCFWCAEQAFEQYVPGVVEAVSGYAGGTNDNPSYRD----HPGHYEVILIEYD 60 +++ VA GCFWC E FE+ V GV E SGY GGT NP+Y GHYE + I YD Sbjct 30 QTITVAGGCFWCVESDFEK-VTGVTEVTSGYTGGTTANPTYSQVTGGGTGHYEAVEIRYD 88 Query 61 PNLTTVALLIEYAYRNMDP 79 + + + + +R++DP Sbjct 89 ADQVSARQIYDLFFRSVDP 107 >ref|NP_893450.1| peptide methionine sulfoxide reductase [Prochlorococcus marinus subsp. pastoris str. CCMP1986] emb|CAE19792.1| Peptide methionine sulfoxide reductase [Prochlorococcus marinus subsp. pastoris str. CCMP1986] Length=200 Score = 72.0 bits (175), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 30/75 (40%), Positives = 47/75 (63%), Gaps = 1/75 (1%) Query 5 KSLVVALGCFWCAEQAFEQYVPGVVEAVSGYAGGTNDNPSYRDHPGHYEVILIEYDPNLT 64 + +V+A GCFWC E E + G+ +SGY+GG P+Y +H GH EV+L+ YD + Sbjct 23 EDVVLAGGCFWCLEHDLES-LRGITSVISGYSGGDLQKPTYENHNGHQEVVLVNYDSEVV 81 Query 65 TVALLIEYAYRNMDP 79 T++ + +RN+DP Sbjct 82 TLSEIYRLYFRNIDP 96 >ref|YP_888692.1| msrA gene product [Mycobacterium smegmatis str. MC2 155] gb|ABK72701.1| methionine-S-sulfoxide reductase [Mycobacterium smegmatis str. MC2 155] Length=189 Score = 72.0 bits (175), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 33/74 (45%), Positives = 46/74 (62%), Gaps = 1/74 (1%) Query 6 SLVVALGCFWCAEQAFEQYVPGVVEAVSGYAGGTNDNPSYRDHPGHYEVILIEYDPNLTT 65 + V+A GCFW E + +PGV+ GY GG ND+P+YR+HPGH E + I YDP T Sbjct 5 TAVLAGGCFWGLEDLI-RALPGVISTRVGYTGGDNDHPTYRNHPGHAEAVEITYDPQQTD 63 Query 66 VALLIEYAYRNMDP 79 L+E+ ++ DP Sbjct 64 YRALLEFFFQIHDP 77 >ref|YP_680821.1| msrA-1 gene product [Roseobacter denitrificans OCh 114] gb|ABG30135.1| methionine-S-sulfoxide reductase, putative [Roseobacter denitrificans OCh 114] Length=220 Score = 72.4 bits (176), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 34/79 (43%), Positives = 51/79 (65%), Gaps = 5/79 (6%) Query 5 KSLVVALGCFWCAEQAFEQYVPGVVEAVSGYAGGTNDNPSYRD----HPGHYEVILIEYD 60 +++ VA GCFWC E FE+ V GV EAVSG+ GG+ NP+Y++ GHYE + I +D Sbjct 33 ETITVAGGCFWCVESDFER-VTGVTEAVSGFMGGSVSNPTYKEVTSGGTGHYEAVQITFD 91 Query 61 PNLTTVALLIEYAYRNMDP 79 P++ + L +R++DP Sbjct 92 PDVVSRDTLYAMFFRSVDP 110 >ref|ZP_08911606.1| peptide methionine sulfoxide reductase [Vibrio rotiferianus DAT722] Length=380 Score = 74.3 bits (181), Expect = 1e-14, Method: Composition-based stats. Identities = 34/75 (45%), Positives = 50/75 (67%), Gaps = 5/75 (7%) Query 9 VALGCFWCAEQAFEQYVPGVVEAVSGYAGGTNDNPSYRD----HPGHYEVILIEYDPNLT 64 +A GCFWC E EQ +PGV++ VSGY+GG +NP+YR GH EVI ++YDP + Sbjct 45 LAGGCFWCTESDLEQ-LPGVLDVVSGYSGGDLENPTYRQVSSGKSGHIEVIEVKYDPAVV 103 Query 65 TVALLIEYAYRNMDP 79 +++Y +R++DP Sbjct 104 NYEQVLDYFFRHIDP 118 >ref|ZP_05137437.1| methionine-S-sulfoxide reductase [Prochlorococcus marinus str. MIT 9202] gb|EEE39262.1| methionine-S-sulfoxide reductase [Prochlorococcus marinus str. MIT 9202] Length=200 Score = 72.0 bits (175), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 31/75 (41%), Positives = 47/75 (63%), Gaps = 1/75 (1%) Query 5 KSLVVALGCFWCAEQAFEQYVPGVVEAVSGYAGGTNDNPSYRDHPGHYEVILIEYDPNLT 64 + L++A GCFWC E E + G+ SGY+GG NP+Y +H GH EV+L++YD Sbjct 23 EELILAGGCFWCLEHDLES-LKGINFVQSGYSGGDLQNPTYENHEGHQEVVLVDYDSQSV 81 Query 65 TVALLIEYAYRNMDP 79 T+ ++ +RN+DP Sbjct 82 TLPEILRLFFRNIDP 96 >gb|EGF40956.1| bifunctional methionine sulfoxide reductase A/B protein [Vibrio parahaemolyticus 10329] Length=380 Score = 73.9 bits (180), Expect = 1e-14, Method: Composition-based stats. Identities = 34/75 (45%), Positives = 49/75 (65%), Gaps = 5/75 (7%) Query 9 VALGCFWCAEQAFEQYVPGVVEAVSGYAGGTNDNPSYRD----HPGHYEVILIEYDPNLT 64 +A GCFWC E EQ +PGV++ VSGY+GG NP+YR GH E I ++YDPN+ Sbjct 45 LAGGCFWCTESDLEQ-LPGVLDVVSGYSGGHVKNPTYRQVSSGKTGHIESIEVKYDPNVV 103 Query 65 TVALLIEYAYRNMDP 79 +++Y +R++DP Sbjct 104 NYEQVLDYFFRHIDP 118 >ref|ZP_04921356.1| peptide methionine sulfoxide reductase family [Vibrio sp. Ex25] ref|YP_003287944.1| peptide methionine sulfoxide reductase [Vibrio sp. Ex25] gb|EDN58250.1| peptide methionine sulfoxide reductase family [Vibrio sp. Ex25] gb|ACY53479.1| peptide methionine sulfoxide reductase [Vibrio sp. Ex25] Length=380 Score = 73.9 bits (180), Expect = 1e-14, Method: Composition-based stats. Identities = 34/76 (45%), Positives = 51/76 (67%), Gaps = 5/76 (7%) Query 8 VVALGCFWCAEQAFEQYVPGVVEAVSGYAGGTNDNPSYRD----HPGHYEVILIEYDPNL 63 ++A GCFWC E EQ + GVV+ VSGY+GG +NP+YR GH EVI ++YDP + Sbjct 44 ILAGGCFWCTESDLEQ-LTGVVDVVSGYSGGHVENPTYRQVSSGKSGHIEVIEVKYDPKV 102 Query 64 TTVALLIEYAYRNMDP 79 + +++Y +R++DP Sbjct 103 VSYEQVLDYFFRHIDP 118 >ref|NP_799717.1| bifunctional methionine sulfoxide reductase A/B protein [Vibrio parahaemolyticus RIMD 2210633] ref|ZP_05775234.1| peptide methionine sulfoxide reductase MsrA/msrB [Vibrio parahaemolyticus K5030] ref|ZP_05892992.1| peptide methionine sulfoxide reductase MsrA/msrB [Vibrio parahaemolyticus AN-5034] ref|ZP_05905088.1| peptide methionine sulfoxide reductase MsrA/msrB [Vibrio parahaemolyticus Peru-466] ref|ZP_05908187.1| peptide methionine sulfoxide reductase MsrA/msrB [Vibrio parahaemolyticus AQ4037] dbj|BAC61550.1| peptide methionine sulfoxide reductase [Vibrio parahaemolyticus RIMD 2210633] gb|EFO36528.1| peptide methionine sulfoxide reductase MsrA/msrB [Vibrio parahaemolyticus Peru-466] gb|EFO41780.1| peptide methionine sulfoxide reductase MsrA/msrB [Vibrio parahaemolyticus AN-5034] gb|EFO47934.1| peptide methionine sulfoxide reductase MsrA/msrB [Vibrio parahaemolyticus AQ4037] gb|EFO53141.1| peptide methionine sulfoxide reductase MsrA/msrB [Vibrio parahaemolyticus K5030] Length=380 Score = 73.9 bits (180), Expect = 1e-14, Method: Composition-based stats. Identities = 34/75 (45%), Positives = 49/75 (65%), Gaps = 5/75 (7%) Query 9 VALGCFWCAEQAFEQYVPGVVEAVSGYAGGTNDNPSYRD----HPGHYEVILIEYDPNLT 64 +A GCFWC E EQ +PGV++ VSGY+GG NP+YR GH E I ++YDPN+ Sbjct 45 LAGGCFWCTESDLEQ-LPGVLDVVSGYSGGHVKNPTYRQVSSGKTGHIESIEVKYDPNVV 103 Query 65 TVALLIEYAYRNMDP 79 +++Y +R++DP Sbjct 104 NYEQVLDYFFRHIDP 118 >ref|YP_397927.1| peptide methionine sulfoxide reductase [Prochlorococcus marinus str. MIT 9312] gb|ABB50491.1| peptide methionine sulfoxide reductase [Prochlorococcus marinus str. MIT 9312] Length=200 Score = 72.0 bits (175), Expect = 1e-14, Method: Compositional matrix adjust. Identities = 32/75 (43%), Positives = 46/75 (61%), Gaps = 1/75 (1%) Query 5 KSLVVALGCFWCAEQAFEQYVPGVVEAVSGYAGGTNDNPSYRDHPGHYEVILIEYDPNLT 64 + L++A GCFWC E E + G+ SGY+GG NP+Y +H GH EV+L+ YD L Sbjct 23 EELILAGGCFWCLEHDLES-LKGINFVQSGYSGGDLQNPTYENHEGHQEVVLVNYDSQLV 81 Query 65 TVALLIEYAYRNMDP 79 T+ ++ RN+DP Sbjct 82 TLPEILRLYLRNIDP 96 >ref|YP_004432982.1| peptide methionine sulfoxide reductase [Glaciecola sp. 4H-3-7+YE-5] gb|AEE21714.1| peptide methionine sulfoxide reductase [Glaciecola sp. 4H-3-7+YE-5] Length=195 Score = 71.6 bits (174), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 31/73 (42%), Positives = 50/73 (68%), Gaps = 2/73 (3%) Query 8 VVALGCFWCAEQAFEQYVPGVVEAVSGYAGGTNDNPSYR-DHPGHYEVILIEYDPNLTTV 66 ++A GCFWC E FE+ + GV + VSG+ GGT NP+Y +H GHYE + I Y+P++ + Sbjct 25 ILAGGCFWCMESDFEK-LEGVTDVVSGFTGGTVRNPTYNGNHKGHYEAVKITYNPDVVSY 83 Query 67 ALLIEYAYRNMDP 79 ++++ + N+DP Sbjct 84 QQILDHYWVNIDP 96 >ref|YP_001228070.1| peptide methionine sulfoxide reductase [Synechococcus sp. RCC307] emb|CAK28717.1| Peptide methionine sulfoxide reductase [Synechococcus sp. RCC307] Length=221 Score = 72.0 bits (175), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 34/79 (43%), Positives = 48/79 (61%), Gaps = 5/79 (6%) Query 5 KSLVVALGCFWCAEQAFEQYVPGVVEAVSGYAGGTNDNPSYRD----HPGHYEVILIEYD 60 + V A GCFWC E E +PGV+ A SGY+GGT NP+Y+ GH E +L+ +D Sbjct 32 QQAVFAGGCFWCLEHDLE-VLPGVISAESGYSGGTTANPTYQQVSSGRTGHAESVLVRFD 90 Query 61 PNLTTVALLIEYAYRNMDP 79 P+ + A L+ +RN+DP Sbjct 91 PDRISYATLLRAFWRNVDP 109 >ref|ZP_00996658.1| methionine sulfoxide reductase A [Janibacter sp. HTCC2649] gb|EAP97244.1| methionine sulfoxide reductase A [Janibacter sp. HTCC2649] Length=230 Score = 72.0 bits (175), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 36/82 (44%), Positives = 50/82 (61%), Gaps = 5/82 (6%) Query 2 DGNKSLVVALGCFWCAEQAFEQYVPGVVEAVSGYAGGTNDNPSYRD----HPGHYEVILI 57 +G + L VA+GCFW AE+ F + +PGVV +GY GG NP+Y + GH E +L+ Sbjct 44 EGTQVLYVAMGCFWGAERIFWK-LPGVVTTAAGYIGGFTPNPTYEETCTGRTGHAEAVLV 102 Query 58 EYDPNLTTVALLIEYAYRNMDP 79 YDP TT LL++ + N DP Sbjct 103 AYDPTRTTPELLLKAFWENHDP 124 >ref|ZP_09242719.1| peptide methionine sulfoxide reductase MsrA 2 [Pseudoalteromonas sp. BSi20495] dbj|GAA78968.1| peptide methionine sulfoxide reductase MsrA 2 [Pseudoalteromonas sp. BSi20495] Length=199 Score = 71.2 bits (173), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 32/80 (40%), Positives = 51/80 (64%), Gaps = 2/80 (3%) Query 1 ADGNKSLVVALGCFWCAEQAFEQYVPGVVEAVSGYAGGTNDNPSYR-DHPGHYEVILIEY 59 A+ + V+A GCFWC E FE+ + GV + +SG+ GG NP+Y +H GHYE + I Y Sbjct 22 AEKTEKAVLAGGCFWCMESDFEK-LKGVTDVISGFTGGKLKNPTYNGNHKGHYEAVEITY 80 Query 60 DPNLTTVALLIEYAYRNMDP 79 DP + + ++++ + N+DP Sbjct 81 DPAIVSYQGILDHYWVNIDP 100 >ref|ZP_01957326.1| peptide methionine sulfoxide reductase [Vibrio cholerae MZO-3] gb|EAY40479.1| peptide methionine sulfoxide reductase [Vibrio cholerae MZO-3] Length=394 Score = 73.6 bits (179), Expect = 2e-14, Method: Composition-based stats. Identities = 33/75 (44%), Positives = 49/75 (65%), Gaps = 5/75 (7%) Query 9 VALGCFWCAEQAFEQYVPGVVEAVSGYAGGTNDNPSYRD----HPGHYEVILIEYDPNLT 64 +A GCFWC E E+ +PGVV+ +SGYAGG DNP+Y+ GH EVI + +DP + Sbjct 60 LAGGCFWCTESDMEK-LPGVVDVISGYAGGDVDNPTYKQVSSGKTGHIEVIQVTFDPKIV 118 Query 65 TVALLIEYAYRNMDP 79 T +++ +R++DP Sbjct 119 TYEQVLDQFFRHIDP 133 >ref|ZP_01740356.1| methionine-S-sulfoxide reductase [Rhodobacterales bacterium HTCC2150] gb|EBA04767.1| methionine-S-sulfoxide reductase [Rhodobacteraceae bacterium HTCC2150] Length=206 Score = 71.2 bits (173), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 33/71 (46%), Positives = 45/71 (63%), Gaps = 5/71 (7%) Query 12 GCFWCAEQAFEQYVPGVVEAVSGYAGGTNDNPSYRD----HPGHYEVILIEYDPNLTTVA 67 GCFWC E FE VPGV +AVSG++GG+ NP+Y+D GHYE + I Y+PN + Sbjct 27 GCFWCVEADFES-VPGVSKAVSGFSGGSKSNPTYKDVTKGGTGHYEAVTITYNPNKVSYE 85 Query 68 LLIEYAYRNMD 78 L+ R++D Sbjct 86 KLLHLFLRSVD 96 >ref|YP_001215396.1| peptide methionine sulfoxide reductase [Vibrio cholerae O395] gb|ABQ18606.1| peptide methionine sulfoxide reductase [Vibrio cholerae O395] gb|ACP11534.1| peptide methionine sulfoxide reductase [Vibrio cholerae O395] Length=394 Score = 73.2 bits (178), Expect = 2e-14, Method: Composition-based stats. Identities = 33/75 (44%), Positives = 49/75 (65%), Gaps = 5/75 (7%) Query 9 VALGCFWCAEQAFEQYVPGVVEAVSGYAGGTNDNPSYRD----HPGHYEVILIEYDPNLT 64 +A GCFWC E E+ +PGVV+ +SGYAGG DNP+Y+ GH EVI + +DP + Sbjct 60 LAGGCFWCTESDMEK-LPGVVDVISGYAGGDVDNPTYKQVSSGKTGHIEVIQVTFDPKIV 118 Query 65 TVALLIEYAYRNMDP 79 T +++ +R++DP Sbjct 119 TYEQVLDQFFRHIDP 133 >ref|ZP_01679086.1| peptide methionine sulfoxide reductase [Vibrio cholerae V52] gb|EAX63919.1| peptide methionine sulfoxide reductase [Vibrio cholerae V52] Length=394 Score = 73.2 bits (178), Expect = 2e-14, Method: Composition-based stats. Identities = 33/75 (44%), Positives = 49/75 (65%), Gaps = 5/75 (7%) Query 9 VALGCFWCAEQAFEQYVPGVVEAVSGYAGGTNDNPSYRD----HPGHYEVILIEYDPNLT 64 +A GCFWC E E+ +PGVV+ +SGYAGG DNP+Y+ GH EVI + +DP + Sbjct 60 LAGGCFWCTESDMEK-LPGVVDVISGYAGGDVDNPTYKQVSSGKTGHIEVIQVTFDPKIV 118 Query 65 TVALLIEYAYRNMDP 79 T +++ +R++DP Sbjct 119 TYEQVLDQFFRHIDP 133 >ref|ZP_05089893.1| methionine-S-sulfoxide reductase [Ruegeria sp. R11] gb|EEB71585.1| methionine-S-sulfoxide reductase [Ruegeria sp. R11] Length=225 Score = 71.6 bits (174), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 36/83 (43%), Positives = 48/83 (58%), Gaps = 5/83 (6%) Query 1 ADGNKSLVVALGCFWCAEQAFEQYVPGVVEAVSGYAGGTNDNPSYRD----HPGHYEVIL 56 A ++L VA GCFWC E FE V GV +SGY GGT ++P+Y+ GHYE + Sbjct 33 AQTTETLTVAGGCFWCVESDFEG-VDGVRSVISGYTGGTTESPTYKQVTGGGTGHYEAVQ 91 Query 57 IEYDPNLTTVALLIEYAYRNMDP 79 I +DP T A L+ R++DP Sbjct 92 IHFDPTQVTRAHLLNLFLRSVDP 114 >ref|ZP_01745901.1| methionine-S-sulfoxide reductase [Sagittula stellata E-37] gb|EBA08523.1| methionine-S-sulfoxide reductase [Sagittula stellata E-37] Length=213 Score = 71.2 bits (173), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 37/77 (48%), Positives = 45/77 (58%), Gaps = 5/77 (6%) Query 7 LVVALGCFWCAEQAFEQYVPGVVEAVSGYAGGTNDNPSY----RDHPGHYEVILIEYDPN 62 L VA GCFWC E FE+ V GV E VSGY GG+ NP+Y R GHYE + I YD Sbjct 29 LFVAGGCFWCVEADFEK-VRGVDEVVSGYTGGSTKNPTYKQVSRGGTGHYEAVRINYDEG 87 Query 63 LTTVALLIEYAYRNMDP 79 T L + +R++DP Sbjct 88 EVTARQLYDLFFRSVDP 104 >ref|ZP_02168487.1| probable peptide methionine sulfoxide reductase protein [Hoeflea phototrophica DFL-43] gb|EDQ31705.1| probable peptide methionine sulfoxide reductase protein [Hoeflea phototrophica DFL-43] Length=210 Score = 71.2 bits (173), Expect = 2e-14, Method: Compositional matrix adjust. Identities = 33/74 (45%), Positives = 46/74 (62%), Gaps = 3/74 (4%) Query 8 VVALGCFWCAEQAFEQYVPGVVEAVSGYAGGTNDNPSYRDHP--GHYEVILIEYDPNLTT 65 + A GCFWC E F+ ++ GV E VSGY GG NDNP+Y H G E + I YDP++ + Sbjct 38 IFAGGCFWCVESDFD-HIEGVKETVSGYIGGKNDNPTYETHTRNGDREAVRITYDPSMVS 96 Query 66 VALLIEYAYRNMDP 79 L++ +R +DP Sbjct 97 YDALLKTFFRTVDP 110 >gb|EGS73905.1| methionine-S-sulfoxide reductase [Vibrio cholerae BJG-01] Length=378 Score = 73.2 bits (178), Expect = 3e-14, Method: Composition-based stats. Identities = 33/75 (44%), Positives = 49/75 (65%), Gaps = 5/75 (7%) Query 9 VALGCFWCAEQAFEQYVPGVVEAVSGYAGGTNDNPSYRD----HPGHYEVILIEYDPNLT 64 +A GCFWC E E+ +PGVV+ +SGYAGG DNP+Y+ GH EVI + +DP + Sbjct 44 LAGGCFWCTESDMEK-LPGVVDVISGYAGGDVDNPTYKQVSSGKTGHIEVIQVTFDPKIV 102 Query 65 TVALLIEYAYRNMDP 79 T +++ +R++DP Sbjct 103 TYEQVLDQFFRHIDP 117 >gb|EGS57585.1| methionine-S-sulfoxide reductase [Vibrio cholerae HC-02A1] Length=378 Score = 73.2 bits (178), Expect = 3e-14, Method: Composition-based stats. Identities = 33/75 (44%), Positives = 49/75 (65%), Gaps = 5/75 (7%) Query 9 VALGCFWCAEQAFEQYVPGVVEAVSGYAGGTNDNPSYRD----HPGHYEVILIEYDPNLT 64 +A GCFWC E E+ +PGVV+ +SGYAGG DNP+Y+ GH EVI + +DP + Sbjct 44 LAGGCFWCTESDMEK-LPGVVDVISGYAGGDVDNPTYKQVSSGKTGHIEVIQVTFDPKIV 102 Query 65 TVALLIEYAYRNMDP 79 T +++ +R++DP Sbjct 103 TYEQVLDQFFRHIDP 117 Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF excluding environmental samples from WGS projects Posted date: Jan 12, 2012 6:11 PM Number of letters in database: 1,532,225,471 Number of sequences in database: 16,971,855 Lambda K H 0.318 0.138 0.434 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Sequences: 16971855 Number of Hits to DB: 105296662 Number of extensions: 4000855 Number of successful extensions: 8017 Number of sequences better than 100: 323 Number of HSP's better than 100 without gapping: 0 Number of HSP's gapped: 7514 Number of HSP's successfully gapped: 323 Length of query: 79 Length of database: 5827192767 Length adjustment: 50 Effective length of query: 29 Effective length of database: 4978600017 Effective search space: 144379400493 Effective search space used: 144379400493 T: 11 A: 40 X1: 16 (7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (20.4 bits) S2: 68 (30.8 bits)