TBLASTN 2.2.13 [Nov-27-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= gi|267844904|ref|NP_058651.3| O-phosphoseryl-tRNA(Sec) selenium transferase [Homo sapiens] (501 letters) Database: G.niphandrodes/genome.fa 3680 sequences; 15,362,869 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gi|338242802|gb|AFNH01001764.1| Gregarina niphandrodes asmbl.256... 29 3.3 gi|338241217|gb|AFNH01002558.1| Gregarina niphandrodes asmbl.328... 29 4.3 gi|338242538|gb|AFNH01001896.1| Gregarina niphandrodes asmbl.268... 28 5.6 gi|338239776|gb|AFNH01003278.1| Gregarina niphandrodes asmbl.634... 28 7.4 gi|338240499|gb|AFNH01002916.1| Gregarina niphandrodes asmbl.362... 28 7.4 gi|338240642|gb|AFNH01002845.1| Gregarina niphandrodes asmbl.355... 28 7.4 gi|338240773|gb|AFNH01002779.1| Gregarina niphandrodes asmbl.349... 28 9.6 gi|338241618|gb|AFNH01002356.1| Gregarina niphandrodes asmbl.310... 28 9.6 gi|338241668|gb|AFNH01002331.1| Gregarina niphandrodes asmbl.307... 28 9.6 >gi|338242802|gb|AFNH01001764.1| Gregarina niphandrodes asmbl.2560, whole genome shotgun sequence Length = 15313 Score = 29.3 bits (64), Expect = 3.3 Identities = 17/59 (28%), Positives = 28/59 (47%), Gaps = 2/59 (3%) Frame = -2 Query: 39 GKCPENGWDESTLELFLHELAIMDSNNFLGNCGVGEREGRVA--SALVARRHYRFIHGI 95 G+CP NG + L L+ + I+ S+ N G+ + A S + RR + F+ I Sbjct: 2826 GQCPRNGHENGGLLLW*PPIGIISSSGH*NNFGIANPQNFYADHSRIHGRRRFVFVRAI 2650 >gi|338241217|gb|AFNH01002558.1| Gregarina niphandrodes asmbl.3288, whole genome shotgun sequence Length = 45373 Score = 28.9 bits (63), Expect = 4.3 Identities = 13/39 (33%), Positives = 21/39 (53%) Frame = -2 Query: 32 IRLLLEKGKCPENGWDESTLELFLHELAIMDSNNFLGNC 70 + L L KCP +++ +H + M+S NF+GNC Sbjct: 40470 LNLYLHLAKCPHG----PSVKFQVHNIHTMESVNFIGNC 40366 >gi|338242538|gb|AFNH01001896.1| Gregarina niphandrodes asmbl.2680, whole genome shotgun sequence Length = 56005 Score = 28.5 bits (62), Expect = 5.6 Identities = 17/50 (34%), Positives = 24/50 (48%) Frame = +1 Query: 170 IDQKSCFKSMITAGFEPVVIENVLEGDELRTDLKAVEAKVQELGPDCILC 219 +D C +S F P+VIE ++EG L AV V++ G I C Sbjct: 12433 VDDTLCVQS-----FLPLVIEPIIEGPSFLQTLAAVSR*VRQTGTQHIYC 12567 >gi|338239776|gb|AFNH01003278.1| Gregarina niphandrodes asmbl.634, whole genome shotgun sequence Length = 4127 Score = 28.1 bits (61), Expect = 7.4 Identities = 22/74 (29%), Positives = 35/74 (47%) Frame = +3 Query: 342 KEMFSYLSNQIKKLSEAYNERLLHTPHNPISLAMTLKTLDEHRDKAVTQLGSMLFTRQVS 401 K SYLS + ++ E Y + +NPI TLK+ R+ + +M+ + S Sbjct: 219 K*FMSYLSRDVLQIWERYRQLQCRLAYNPILTIRTLKSYSLRREARLD--ATMMPGGKES 392 Query: 402 GARVVPLGSMQTVS 415 GA +P + TVS Sbjct: 393 GA-TLPSQAESTVS 431 >gi|338240499|gb|AFNH01002916.1| Gregarina niphandrodes asmbl.3621, whole genome shotgun sequence Length = 33808 Score = 28.1 bits (61), Expect = 7.4 Identities = 17/51 (33%), Positives = 29/51 (56%), Gaps = 2/51 (3%) Frame = +1 Query: 432 AYLNAASAIGMKMQDVDLFIKRLDRCLKAVRKERSKESDDN--YDKTEDVD 480 AY ++ + + DV+ FIK R LK ++ S E DD+ +++ ED+D Sbjct: 3547 AYASSVNDGDDEDDDVEEFIKDRKRVLKQTKRFLSDEDDDSQLFEEGEDLD 3699 >gi|338240642|gb|AFNH01002845.1| Gregarina niphandrodes asmbl.3557, whole genome shotgun sequence Length = 3879 Score = 28.1 bits (61), Expect = 7.4 Identities = 19/58 (32%), Positives = 26/58 (44%), Gaps = 2/58 (3%) Frame = +3 Query: 35 LLEKGKCPENGWDESTLELFLHELAIMDSNNFLGNCGV--GEREGRVASALVARRHYR 90 L E CP NGW S L F+ A S + +G G+ G R+ R + +R R Sbjct: 1899 LKEASSCPRNGW--SLLIPFIQPNATASSPDQIGGVGLTRGNRDSREGTGCEEKRGRR 2066 >gi|338240773|gb|AFNH01002779.1| Gregarina niphandrodes asmbl.3498, whole genome shotgun sequence Length = 14632 Score = 27.7 bits (60), Expect = 9.6 Identities = 25/90 (27%), Positives = 34/90 (37%), Gaps = 5/90 (5%) Frame = +1 Query: 181 TAGFEPVVIENVLEGDELRTDLKAVEAKVQELGPDCILCIHSTTSCFAPRVPDRLEEL-- 238 TA F V +E D + L+ A +Q G + S R+PD L+ Sbjct: 6772 TAAFSKVFLEQSCASDSDQDWLELSVASIQPSGRQLSVFTILQESDTRGRLPDALQVTKG 6951 Query: 239 -AVICANY--DIPHIVNNAYGVQSSKCMHL 265 A A + +PH NN S C HL Sbjct: 6952 SAAAAAIF*ATLPHCANNVIPKSCSTCWHL 7041 >gi|338241618|gb|AFNH01002356.1| Gregarina niphandrodes asmbl.3100, whole genome shotgun sequence Length = 6792 Score = 27.7 bits (60), Expect = 9.6 Identities = 10/22 (45%), Positives = 15/22 (68%) Frame = -1 Query: 77 GRVASALVARRHYRFIHGIGRS 98 GR+ L RHY+ +HG+GR+ Sbjct: 1800 GRLCPHLPVPRHYQVVHGLGRA 1735 >gi|338241668|gb|AFNH01002331.1| Gregarina niphandrodes asmbl.3077, whole genome shotgun sequence Length = 9468 Score = 27.7 bits (60), Expect = 9.6 Identities = 15/52 (28%), Positives = 25/52 (48%), Gaps = 6/52 (11%) Frame = -1 Query: 430 PCAYLNAASAIGMKMQDVDLFIKRLDRCLKAVR------KERSKESDDNYDK 475 PC Y+ A+ + + F+ L RCL+ +R +E E DD+ D+ Sbjct: 5868 PCRYMQLATRKDLLFKHHFCFVSELSRCLQELRTRIHGIEETRGEHDDHEDQ 5713 Database: G.niphandrodes/genome.fa Posted date: Nov 21, 2011 7:46 PM Number of letters in database: 15,362,869 Number of sequences in database: 3680 Lambda K H 0.320 0.135 0.394 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 8,674,616 Number of Sequences: 3680 Number of extensions: 129645 Number of successful extensions: 668 Number of sequences better than 10.0: 9 Number of HSP's better than 10.0 without gapping: 346 Number of HSP's successfully gapped in prelim test: 39 Number of HSP's that attempted gapping in prelim test: 289 Number of HSP's gapped (non-prelim): 452 length of query: 501 length of database: 5,120,956 effective HSP length: 99 effective length of query: 402 effective length of database: 4,756,636 effective search space: 1912167672 effective search space used: 1912167672 frameshift window, decay const: 40, 0.1 T: 13 A: 40 X1: 16 ( 7.4 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.8 bits) S2: 60 (27.7 bits)