genewise output
Score 31.02 bits over entire alignment
Scores as bits over a synchronous coding model

Warning: The bits scores is not probablistically correct for single seqs
See WWW help for more info

selw_tetrahymen   17 FQVLIEYCGSXGYQNMFDYAKKCIEQIYPSA                   
                     F VLIEYCGSXGY N F++ K CI   YP+A                   
                     FDVLIEYCGSXGYHNTFEFTKNCITMAYPNA                   
gi|340502159|gb10048 tggtagttgttgtcaatgtaaataaagtcag                   
                     tatttaaggcggaaactatcaagtctcacac                   
                     ttcacattttattttacgtcgtcatgatata                   


//
>gi|340502159|gb|GL984205.1|:subseq(128994,14689).[10048:10140].sp
TTTGATGTCTTAATCGAATATTGTGGTTCTTGAGGTTATCATAATACATTCGAGTTTACC
AAGAATTGCATAACTATGGCATATCCAAATGCA
//
gi|340502159|gb|GL984205.1|:subseq(128994,14689)	GeneWise	match	10048	10140	31.02	+	.	gi|340502159|gb|GL984205.1|:subseq(128994,14689)-genewise-prediction-1
gi|340502159|gb|GL984205.1|:subseq(128994,14689)	GeneWise	cds	10048	10140	0.00	+	0	gi|340502159|gb|GL984205.1|:subseq(128994,14689)-genewise-prediction-1
//

genewise output
Score 14.12 bits over entire alignment
Scores as bits over a synchronous coding model

Warning: The bits scores is not probablistically correct for single seqs
See WWW help for more info

selw_tetrahymen    7 KQIQTNKNLKFQVLIEY                                 
                     K+ + NKN+ F  +I Y                                 
                     KKEKKNKNIIFVYIILY                                 
gi|340502159|gb-8038 aagaaaaaaatgtaatt                                 
                     aaaaaaaattttattta                                 
                     agaaacattattttaat                                 


//
>gi|340502159|gb|GL984205.1|:subseq(128994,14689).[8038:7986].sp
AAAAAGGAAAAAAAAAACAAAAATATTATATTTGTTTATATTATATTATAT
//
gi|340502159|gb|GL984205.1|:subseq(128994,14689)	GeneWise	match	8038	7988	14.12	-	.	gi|340502159|gb|GL984205.1|:subseq(128994,14689)-genewise-prediction-1
gi|340502159|gb|GL984205.1|:subseq(128994,14689)	GeneWise	cds	8038	7988	0.00	-	0	gi|340502159|gb|GL984205.1|:subseq(128994,14689)-genewise-prediction-1
//