BLASTP 2.2.26+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro
A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and
David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new
generation of protein database search programs", Nucleic
Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Stephen
F. Altschul, John C. Wootton, E. Michael Gertz, Richa
Agarwala, Aleksandr Morgulis, Alejandro A. Schaffer, and
Yi-Kuo Yu (2005) "Protein database searches using
compositionally adjusted substitution matrices", FEBS J.
272:5101-5109.


RID: GYETKMUV01N


Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
           16,927,445 sequences; 5,811,956,865 total letters
Query= gi|340508766|gb|GL983129.1|:subseq(0,30000) Ichthyophthirius
multifiliis unplaced genomic scaffold scaff_1120509249573, whole
genome shotgun sequence:[translate(1)]

Length=54


                                                                   Score     E
Sequences producing significant alignments:                       (Bits)  Value

gb|AAX61159.1|  selenoprotein W2a [Oreochromis mossambicus]        46.2    5e-06
ref|XP_003057240.1|  selenoprotein W [Micromonas pusilla CCMP1...  42.4    2e-04
ref|NP_001092154.1|  uncharacterized protein LOC100049740 [Xen...  42.0    2e-04
ref|XP_003428786.1|  PREDICTED: LOW QUALITY PROTEIN: selenopro...  42.0    5e-04
ref|NP_919399.3|  selenoprotein W, 2b [Danio rerio]                40.4    0.001
gb|AAO86697.1|  selenoprotein W2b [Danio rerio]                    40.0    0.001
emb|CCD58896.1|  Selenoprotein W, putative [Schistosoma mansoni]   39.3    0.002
emb|CAG32466.1|  hypothetical protein RCJMB04_26b22 [Gallus ga...  39.3    0.005
sp|Q568W0.3|SELW_DANRE  RecName: Full=Selenoprotein W; Short=S...  38.5    0.005
ref|NP_001159799.1|  selenoprotein W [Gallus gallus] >sp|D0EYG...  38.5    0.005
gb|EHH24902.1|  Protein C35 [Macaca mulatta]                       38.9    0.005
ref|NP_840072.3|  selenoprotein W [Danio rerio] >ref|NP_001165...  38.5    0.005
ref|XP_001091012.1|  PREDICTED: uncharacterized protein C17orf...  38.9    0.006
gb|EHH58074.1|  Protein C35 [Macaca fascicularis]                  38.9    0.006
ref|XP_003222607.1|  PREDICTED: protein C17orf37 homolog [Anol...  38.9    0.006
ref|NP_001156697.1|  selenoprotein W [Bos taurus] >sp|O19097.4...  38.1    0.008
ref|NP_001177191.1|  selenoprotein W, 1 [Ciona intestinalis]       37.0    0.021
ref|NP_919398.1|  selenoprotein W, 2a [Danio rerio] >gb|AAO652...  36.6    0.032
ref|NP_001015996.1|  uncharacterized protein LOC548750 [Xenopu...  36.2    0.043
gb|ABS19961.1|  selenoprotein W2 [Artemia franciscana]             35.8    0.062
ref|XP_003464662.1|  PREDICTED: LOW QUALITY PROTEIN: selenopro...  35.0    0.12 
ref|NP_001163893.1|  selenoprotein W, 1 [Equus caballus]           34.7    0.15 
ref|XP_002922808.1|  PREDICTED: LOW QUALITY PROTEIN: selenopro...  34.7    0.17 
gb|EGB06107.1|  selenoprotein [Aureococcus anophagefferens]        34.7    0.19 
ref|NP_037159.3|  selenoprotein W [Rattus norvegicus]              33.9    0.33 
ref|NP_033182.1|  selenoprotein W [Mus musculus] >sp|P63300.3|...  33.9    0.35 
ref|NP_001186837.1|  selenoprotein W [Callithrix jacchus]          33.5    0.41 
ref|XP_003214005.1|  PREDICTED: protein C17orf37 homolog, part...  33.1    0.46 
gb|EFW45343.1|  hypothetical protein CAOG_03349 [Capsaspora ow...  32.3    1.3  
ref|XP_001605689.2|  PREDICTED: hypothetical protein LOC100122...  33.1    1.4  
ref|NP_003000.1|  selenoprotein W [Homo sapiens] >ref|NP_00103...  32.0    1.6  
ref|NP_001159517.1|  selenoprotein V [Sus scrofa] >gb|ACV87533...  32.7    1.8  
gb|ACL81234.1|  selenoprotein W [Moneuplotes crassus]              32.0    1.8  
ref|XP_968954.1|  PREDICTED: similar to selenoprotein W2 [Trib...  32.0    1.9  
gb|EGB03200.1|  selenoprotein [Aureococcus anophagefferens] >g...  31.6    2.3  
ref|XP_001693901.1|  selenoprotein W1 [Chlamydomonas reinhardt...  31.6    2.4  
ref|NP_999142.1|  selenoprotein W [Sus scrofa] >sp|Q95KL4.4|SE...  31.6    2.7  
gb|AEG60881.1|  SelT/selW/selH selenoprotein [Desulfotomaculum...  31.2    3.1  
ref|ZP_09454520.1|  ABC transporter substrate-binding protein ...  31.6    5.6  
ref|NP_001156716.1|  selenoprotein V [Bos taurus] >gb|DAA19974...  30.8    9.3  

ALIGNMENTS
>gb|AAX61159.1| selenoprotein W2a [Oreochromis mossambicus]
Length=95

 Score = 46.2 bits (108),  Expect = 5e-06, Method: Compositional matrix adjust.
 Identities = 21/49 (43%), Positives = 29/49 (59%), Gaps = 2/49 (4%)

Query  6   IKVMVEYCGSXGYKPSFNNLSNSIKNSFSQIVIEGKAIAGNTGCFEVYI  54
           +KV VEYCG  GY+P +  L+  +K  FS   + G  + G TG FE+ I
Sbjct  3   VKVRVEYCGGUGYEPRYRELARVVKGEFSDADVTG--VVGRTGSFEIEI  49


>ref|XP_003057240.1| selenoprotein W [Micromonas pusilla CCMP1545]
 gb|EEH58885.1| selenoprotein W [Micromonas pusilla CCMP1545]
Length=97

 Score = 42.4 bits (98),  Expect = 2e-04, Method: Compositional matrix adjust.
 Identities = 17/49 (35%), Positives = 27/49 (55%), Gaps = 0/49 (0%)

Query  6   IKVMVEYCGSXGYKPSFNNLSNSIKNSFSQIVIEGKAIAGNTGCFEVYI  54
           +KV + YCG  GY P +  + N+IK  F  +   G+    ++G FEV +
Sbjct  2   VKVHITYCGGUGYAPKYKQVENAIKAKFPSVESSGEPTPTSSGAFEVVL  50


>ref|NP_001092154.1| uncharacterized protein LOC100049740 [Xenopus laevis]
 gb|AAI41722.1| LOC100049740 protein [Xenopus laevis]
Length=95

 Score = 42.0 bits (97),  Expect = 2e-04, Method: Compositional matrix adjust.
 Identities = 18/49 (37%), Positives = 29/49 (59%), Gaps = 2/49 (4%)

Query  6   IKVMVEYCGSXGYKPSFNNLSNSIKNSFSQIVIEGKAIAGNTGCFEVYI  54
           + +MVEYC   G++  +  L++++K  F  I IE +   G TG FE+ I
Sbjct  3   VSIMVEYCEPCGFRSHYEELASAVKEEFPDITIESR--PGGTGAFEIEI  49


>ref|XP_003428786.1| PREDICTED: LOW QUALITY PROTEIN: selenoprotein W-like [Ornithorhynchus 
anatinus]
Length=135

 Score = 42.0 bits (97),  Expect = 5e-04, Method: Compositional matrix adjust.
 Identities = 22/50 (44%), Positives = 29/50 (58%), Gaps = 1/50 (2%)

Query  6   IKVMVEYCGSXGYKPSFNNLSNSIKNSFS-QIVIEGKAIAGNTGCFEVYI  54
           + V V YCG+XGYKP F  L   ++N F  Q+ I G+     TG FEV +
Sbjct  50  VPVHVVYCGAXGYKPKFLQLKKKLENEFPGQVEISGEGTPQVTGWFEVTV  99


>ref|NP_919399.3| selenoprotein W, 2b [Danio rerio]
Length=94

 Score = 40.4 bits (93),  Expect = 0.001, Method: Compositional matrix adjust.
 Identities = 19/49 (39%), Positives = 26/49 (53%), Gaps = 2/49 (4%)

Query  6   IKVMVEYCGSXGYKPSFNNLSNSIKNSFSQIVIEGKAIAGNTGCFEVYI  54
           +KV +EYCG+ GY+P F  L   I  +     + G    G  GCFE+ I
Sbjct  3   VKVKIEYCGAUGYEPRFQELKREICGNCPDAEVSG--FVGRRGCFEIQI  49


>gb|AAO86697.1| selenoprotein W2b [Danio rerio]
Length=94

 Score = 40.0 bits (92),  Expect = 0.001, Method: Compositional matrix adjust.
 Identities = 19/49 (39%), Positives = 26/49 (53%), Gaps = 2/49 (4%)

Query  6   IKVMVEYCGSXGYKPSFNNLSNSIKNSFSQIVIEGKAIAGNTGCFEVYI  54
           +KV +EYCG+ GY+P F  L   I  +     + G    G  GCFE+ I
Sbjct  3   VKVKIEYCGAUGYEPRFQELKREICGNCPDAEVSG--FVGRRGCFEIQI  49


>emb|CCD58896.1| Selenoprotein W, putative [Schistosoma mansoni]
Length=84

 Score = 39.3 bits (90),  Expect = 0.002, Method: Compositional matrix adjust.
 Identities = 17/50 (34%), Positives = 30/50 (60%), Gaps = 1/50 (2%)

Query  6   IKVMVEYCGSXGYKPSFNNLSNSIKNSFS-QIVIEGKAIAGNTGCFEVYI  54
           +K+ V YCG+ GY+P +N+    ++  F  ++ I G+    +TG FEV +
Sbjct  3   LKIHVIYCGAUGYEPKYNSFKQQLERRFPGKLEISGEGTPQSTGWFEVQV  52


>emb|CAG32466.1| hypothetical protein RCJMB04_26b22 [Gallus gallus]
Length=126

 Score = 39.3 bits (90),  Expect = 0.005, Method: Compositional matrix adjust.
 Identities = 16/52 (31%), Positives = 31/52 (60%), Gaps = 2/52 (4%)

Query  3   DNQIKVMVEYCGSXGYKPSFNNLSNSIKNSFSQIVIEGKAIAGNTGCFEVYI  54
           + ++ +MVEYC   G+  ++  L+++++  +  I IE +   G TG FE+ I
Sbjct  31  ERRVHIMVEYCEPCGFGATYEELASAVREEYPDIEIESR--LGGTGAFEIEI  80


>sp|Q568W0.3|SELW_DANRE RecName: Full=Selenoprotein W; Short=SelW
 gb|AAH92686.2| Selenoprotein W, 1 [Danio rerio]
Length=86

 Score = 38.5 bits (88),  Expect = 0.005, Method: Compositional matrix adjust.
 Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 1/50 (2%)

Query  6   IKVMVEYCGSXGYKPSFNNLSNSIKNSFS-QIVIEGKAIAGNTGCFEVYI  54
           +KV V YCG  GY+P F  L   +++ F  ++ I G+     TG  EV +
Sbjct  3   VKVHVVYCGGUGYRPKFIKLKTLLEDEFPNELEITGEGTPSTTGWLEVEV  52


>ref|NP_001159799.1| selenoprotein W [Gallus gallus]
 sp|D0EYG3.1|SELW_CHICK RecName: Full=Selenoprotein W; Short=SelW
 gb|ACX47065.1| selenoprotein W [Gallus gallus]
Length=85

 Score = 38.5 bits (88),  Expect = 0.005, Method: Compositional matrix adjust.
 Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 1/50 (2%)

Query  6   IKVMVEYCGSXGYKPSFNNLSNSIKNSFS-QIVIEGKAIAGNTGCFEVYI  54
           ++V V YCG+ GYKP +  L   ++  F   + + G+     TG FEV +
Sbjct  3   LRVTVLYCGAUGYKPKYERLRAELEKRFPGALEMRGQGTQEVTGWFEVTV  52


>gb|EHH24902.1| Protein C35 [Macaca mulatta]
Length=115

 Score = 38.9 bits (89),  Expect = 0.005, Method: Compositional matrix adjust.
 Identities = 17/49 (35%), Positives = 31/49 (63%), Gaps = 2/49 (4%)

Query  6   IKVMVEYCGSXGYKPSFNNLSNSIKNSFSQIVIEGKAIAGNTGCFEVYI  54
           +++MVEYC   G++ ++  L++++K  +  I IE +   G TG FE+ I
Sbjct  23  VRIMVEYCEPCGFEATYLELASAVKEQYPGIEIESR--LGGTGAFEIEI  69


>ref|NP_840072.3| selenoprotein W [Danio rerio]
 ref|NP_001165152.1| selenoprotein W, 1 [Xenopus (Silurana) tropicalis]
 gb|AAO86696.1| selenoprotein W1 [Danio rerio]
 gb|AAI52098.1| Selenoprotein W, 1 [Danio rerio]
 gb|AAI60969.1| LOC100145402 protein [Xenopus (Silurana) tropicalis]
Length=86

 Score = 38.5 bits (88),  Expect = 0.005, Method: Compositional matrix adjust.
 Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 1/50 (2%)

Query  6   IKVMVEYCGSXGYKPSFNNLSNSIKNSFS-QIVIEGKAIAGNTGCFEVYI  54
           +KV V YCG  GY+P F  L   +++ F  ++ I G+     TG  EV +
Sbjct  3   VKVHVVYCGGUGYRPKFIKLKTLLEDEFPNELEITGEGTPSTTGWLEVEV  52


>ref|XP_001091012.1| PREDICTED: uncharacterized protein C17orf37 [Macaca mulatta]
 dbj|BAE87852.1| unnamed protein product [Macaca fascicularis]
Length=115

 Score = 38.9 bits (89),  Expect = 0.006, Method: Compositional matrix adjust.
 Identities = 17/49 (35%), Positives = 31/49 (63%), Gaps = 2/49 (4%)

Query  6   IKVMVEYCGSXGYKPSFNNLSNSIKNSFSQIVIEGKAIAGNTGCFEVYI  54
           +++MVEYC   G++ ++  L++++K  +  I IE +   G TG FE+ I
Sbjct  23  VRIMVEYCEPCGFEATYLELASAVKEQYPGIEIESR--LGGTGAFEIEI  69


>gb|EHH58074.1| Protein C35 [Macaca fascicularis]
Length=115

 Score = 38.9 bits (89),  Expect = 0.006, Method: Compositional matrix adjust.
 Identities = 17/49 (35%), Positives = 31/49 (63%), Gaps = 2/49 (4%)

Query  6   IKVMVEYCGSXGYKPSFNNLSNSIKNSFSQIVIEGKAIAGNTGCFEVYI  54
           +++MVEYC   G++ ++  L++++K  +  I IE +   G TG FE+ I
Sbjct  23  VRIMVEYCEPCGFEATYLELASAVKEQYPGIEIESR--LGGTGAFEIEI  69


>ref|XP_003222607.1| PREDICTED: protein C17orf37 homolog [Anolis carolinensis]
Length=112

 Score = 38.9 bits (89),  Expect = 0.006, Method: Compositional matrix adjust.
 Identities = 16/49 (33%), Positives = 31/49 (63%), Gaps = 2/49 (4%)

Query  6   IKVMVEYCGSXGYKPSFNNLSNSIKNSFSQIVIEGKAIAGNTGCFEVYI  54
           ++++VEYC   G++ ++  L+N++K  +  + IE +   G TG FE+ I
Sbjct  20  VRIVVEYCKPCGFESAYLELANAVKEEYPDVEIESR--LGGTGAFEIEI  66


>ref|NP_001156697.1| selenoprotein W [Bos taurus]
 sp|O19097.4|SELW_SHEEP RecName: Full=Selenoprotein W; Short=SelW
 gb|AAC48757.1| selenoprotein W [Ovis aries]
 gb|DAA19598.1| selenoprotein W, 1 [Bos taurus]
Length=87

 Score = 38.1 bits (87),  Expect = 0.008, Method: Compositional matrix adjust.
 Identities = 19/48 (40%), Positives = 29/48 (60%), Gaps = 1/48 (2%)

Query  8   VMVEYCGSXGYKPSFNNLSNSIKNSF-SQIVIEGKAIAGNTGCFEVYI  54
           V V YCG+ GYKP +  L   +++ F S++ I G+     TG FEV++
Sbjct  5   VRVVYCGAUGYKPKYLQLKKKLEDEFPSRLDICGEGTPQVTGFFEVFV  52


>ref|NP_001177191.1| selenoprotein W, 1 [Ciona intestinalis]
Length=88

 Score = 37.0 bits (84),  Expect = 0.021, Method: Compositional matrix adjust.
 Identities = 17/55 (31%), Positives = 28/55 (51%), Gaps = 2/55 (4%)

Query  2   MDNQIKVMVEYCGSXGYKPSFNNLSNSIKNSFSQIVIE--GKAIAGNTGCFEVYI  54
           M N++K+ V YCG  GY+P +  L + +   + Q  +E   +     TG  EV +
Sbjct  1   MPNKVKIHVVYCGGUGYRPRYERLKDDLSKDYDQNEVEFSSEGTPEVTGYLEVLV  55


>ref|NP_919398.1| selenoprotein W, 2a [Danio rerio]
 gb|AAO65270.1| selenoprotein W2a [Danio rerio]
 gb|AAI62535.1| Selenoprotein W, 2a [Danio rerio]
 gb|AAI62538.1| Selenoprotein W, 2a [Danio rerio]
Length=95

 Score = 36.6 bits (83),  Expect = 0.032, Method: Compositional matrix adjust.
 Identities = 16/49 (33%), Positives = 25/49 (51%), Gaps = 2/49 (4%)

Query  6   IKVMVEYCGSXGYKPSFNNLSNSIKNSFSQIVIEGKAIAGNTGCFEVYI  54
           +++ VEYCG  GY+P +  L   +   F+   + G    G  G FE+ I
Sbjct  3   VQIKVEYCGGUGYEPRYQELKRVVTAEFTDADVSG--FVGRQGSFEIEI  49


>ref|NP_001015996.1| uncharacterized protein LOC548750 [Xenopus (Silurana) tropicalis]
 gb|AAI22006.1| hypothetical protein LOC548750 [Xenopus (Silurana) tropicalis]
Length=95

 Score = 36.2 bits (82),  Expect = 0.043, Method: Compositional matrix adjust.
 Identities = 15/49 (31%), Positives = 28/49 (57%), Gaps = 2/49 (4%)

Query  6   IKVMVEYCGSXGYKPSFNNLSNSIKNSFSQIVIEGKAIAGNTGCFEVYI  54
           + ++VEYC   G+K  +  L++++   F  + I+ +   G TG FE+ I
Sbjct  3   VSIVVEYCEPCGFKSHYEELASAVLEEFPDVTIDSR--PGGTGAFEIEI  49


>gb|ABS19961.1| selenoprotein W2 [Artemia franciscana]
Length=94

 Score = 35.8 bits (81),  Expect = 0.062, Method: Compositional matrix adjust.
 Identities = 16/49 (33%), Positives = 25/49 (51%), Gaps = 2/49 (4%)

Query  6   IKVMVEYCGSXGYKPSFNNLSNSIKNSFSQIVIEGKAIAGNTGCFEVYI  54
           +K+ VEYCG+ GY P +  L+  I+ +     + G    G    FEV +
Sbjct  2   VKIHVEYCGAUGYAPRYQELAAKIRKAAPDAEVSGN--VGRRSSFEVTV  48


>ref|XP_003464662.1| PREDICTED: LOW QUALITY PROTEIN: selenoprotein W-like [Cavia porcellus]
Length=87

 Score = 35.0 bits (79),  Expect = 0.12, Method: Compositional matrix adjust.
 Identities = 19/50 (38%), Positives = 28/50 (56%), Gaps = 1/50 (2%)

Query  6   IKVMVEYCGSXGYKPSFNNLSNSIKNSFSQIV-IEGKAIAGNTGCFEVYI  54
           + V V YCG+XGYKP +  L   +++ F   + I G+     TG FEV +
Sbjct  3   LAVRVVYCGAXGYKPKYLQLKEKLEDEFPGCLDICGEGTPQTTGFFEVTV  52


>ref|NP_001163893.1| selenoprotein W, 1 [Equus caballus]
Length=87

 Score = 34.7 bits (78),  Expect = 0.15, Method: Compositional matrix adjust.
 Identities = 18/50 (36%), Positives = 28/50 (56%), Gaps = 1/50 (2%)

Query  6   IKVMVEYCGSXGYKPSFNNLSNSIKNSFS-QIVIEGKAIAGNTGCFEVYI  54
           + V V YCG+ GYKP +  L   +++ F  ++ I G+     TG FEV +
Sbjct  3   LAVRVVYCGAUGYKPKYLALKKKLEDEFPGRLDICGEGTPQVTGFFEVMV  52


>ref|XP_002922808.1| PREDICTED: LOW QUALITY PROTEIN: selenoprotein W-like [Ailuropoda 
melanoleuca]
Length=99

 Score = 34.7 bits (78),  Expect = 0.17, Method: Compositional matrix adjust.
 Identities = 18/55 (33%), Positives = 30/55 (55%), Gaps = 1/55 (2%)

Query  1   NMDNQIKVMVEYCGSXGYKPSFNNLSNSIKNSFSQIV-IEGKAIAGNTGCFEVYI  54
           N+ N+++V   YCG+XGYK     L   +++ F + + I G+      G FEV +
Sbjct  10  NLRNELQVFAVYCGTXGYKSKHLQLKRKLEDEFPRCLDIYGERTPXAIGFFEVMV  64


>gb|EGB06107.1| selenoprotein [Aureococcus anophagefferens]
Length=109

 Score = 34.7 bits (78),  Expect = 0.19, Method: Compositional matrix adjust.
 Identities = 16/47 (34%), Positives = 26/47 (55%), Gaps = 0/47 (0%)

Query  8   VMVEYCGSXGYKPSFNNLSNSIKNSFSQIVIEGKAIAGNTGCFEVYI  54
           V ++YCGS GY      L ++I+   S + +   +  G TG FEV++
Sbjct  30  VTIQYCGSUGYSKYAKQLQSTIEEECSGVTVTLTSDEGKTGSFEVFL  76


>ref|NP_037159.3| selenoprotein W [Rattus norvegicus]
Length=93

 Score = 33.9 bits (76),  Expect = 0.33, Method: Compositional matrix adjust.
 Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 1/50 (2%)

Query  6   IKVMVEYCGSXGYKPSFNNLSNSIKNSFSQIV-IEGKAIAGNTGCFEVYI  54
           + V V YCG+ GYKP +  L   +++ F   + I G+     TG FEV +
Sbjct  8   LAVRVVYCGAUGYKPKYLQLKEKLEHEFPGCLDICGEGTPQVTGFFEVTV  57


>ref|NP_033182.1| selenoprotein W [Mus musculus]
 sp|P63300.3|SELW_MOUSE RecName: Full=Selenoprotein W; Short=SelW
 sp|P63301.3|SELW_RAT RecName: Full=Selenoprotein W; Short=SelW
 gb|AAC53317.1| selenoprotein W [Mus musculus]
 gb|AAB69860.1| selenoprotein W [Mus musculus]
 gb|AAF64481.1| selenoprotein W [Mus musculus]
 gb|AAC52255.2| selenoprotein W [Rattus norvegicus]
 dbj|BAC55247.1| unnamed protein product [Mus musculus]
 dbj|BAC55256.1| unnamed protein product [Mus musculus]
 gb|AAH52719.2| Selenoprotein W, muscle 1 [Mus musculus]
 gb|AAH87625.1| Selenoprotein W, 1 [Rattus norvegicus]
Length=88

 Score = 33.9 bits (76),  Expect = 0.35, Method: Compositional matrix adjust.
 Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 1/50 (2%)

Query  6   IKVMVEYCGSXGYKPSFNNLSNSIKNSFSQIV-IEGKAIAGNTGCFEVYI  54
           + V V YCG+ GYKP +  L   +++ F   + I G+     TG FEV +
Sbjct  3   LAVRVVYCGAUGYKPKYLQLKEKLEHEFPGCLDICGEGTPQVTGFFEVTV  52


>ref|NP_001186837.1| selenoprotein W [Callithrix jacchus]
Length=87

 Score = 33.5 bits (75),  Expect = 0.41, Method: Compositional matrix adjust.
 Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 1/50 (2%)

Query  6   IKVMVEYCGSXGYKPSFNNLSNSIKNSFS-QIVIEGKAIAGNTGCFEVYI  54
           + V V YCG+ GYK  +  L   +++ F  ++ I G+     TG FEV +
Sbjct  3   LTVRVVYCGAUGYKSKYLQLKKKLEDEFPGRLDISGEGTPQATGFFEVTV  52


>ref|XP_003214005.1| PREDICTED: protein C17orf37 homolog, partial [Meleagris gallopavo]
Length=72

 Score = 33.1 bits (74),  Expect = 0.46, Method: Compositional matrix adjust.
 Identities = 10/39 (26%), Positives = 24/39 (62%), Gaps = 0/39 (0%)

Query  3   DNQIKVMVEYCGSXGYKPSFNNLSNSIKNSFSQIVIEGK  41
           + ++ +MVEYC   G+  ++  L+++++  +  I IE +
Sbjct  30  ERRVHIMVEYCEPCGFGATYEELASAVREEYPDIEIESR  68


>gb|EFW45343.1| hypothetical protein CAOG_03349 [Capsaspora owczarzaki ATCC 30864]
Length=85

 Score = 32.3 bits (72),  Expect = 1.3, Method: Compositional matrix adjust.
 Identities = 16/49 (33%), Positives = 25/49 (51%), Gaps = 2/49 (4%)

Query  6   IKVMVEYCGSXGYKPSFNNLSNSIKNSFSQIVIEGKAIAGNTGCFEVYI  54
           +KV +EYC + GY P    +  +I+  F    + G+   G +  FEV I
Sbjct  3   LKVNIEYCSACGYFPRMKEIERAIQKEFPTAKVTGE--GGRSKSFEVTI  49


>ref|XP_001605689.2| PREDICTED: hypothetical protein LOC100122087 [Nasonia vitripennis]
Length=167

 Score = 33.1 bits (74),  Expect = 1.4, Method: Composition-based stats.
 Identities = 16/51 (31%), Positives = 28/51 (55%), Gaps = 2/51 (4%)

Query  4   NQIKVMVEYCGSXGYKPSFNNLSNSIKNSFSQIVIEGKAIAGNTGCFEVYI  54
           ++++V VEYCG+ G+   F  ++  IK +  +  I G+   G    FEV +
Sbjct  8   SEVRVDVEYCGTCGHIKQFIEMAQKIKEALPEAKISGE--PGRQASFEVRV  56


>ref|NP_003000.1| selenoprotein W [Homo sapiens]
 ref|NP_001036202.1| selenoprotein W [Macaca mulatta]
 ref|NP_001127129.1| selenoprotein W [Pongo abelii]
 ref|NP_001148049.1| selenoprotein W, 1 [Pan troglodytes]
 sp|Q5NVB2.4|SELW_PONAB RecName: Full=Selenoprotein W; Short=SelW
 sp|P63303.3|SELW_MACMU RecName: Full=Selenoprotein W; Short=SelW
 sp|P63302.3|SELW_HUMAN RecName: Full=Selenoprotein W; Short=SelW
 gb|AAC51665.1| selenoprotein W [Homo sapiens]
 gb|AAC51666.1| selenoprotein W [Macaca mulatta]
 gb|AAB69859.1| selenoprotein W [Homo sapiens]
 gb|AAL00898.1| selenoprotein W [Homo sapiens]
 gb|AAH00581.1| Selenoprotein W, 1 [Homo sapiens]
 gb|AAH32546.1| Selenoprotein W, 1 [Homo sapiens]
 gb|AAH39597.1| Selenoprotein W, 1 [Homo sapiens]
 gb|AAH47893.2| Selenoprotein W, 1 [Homo sapiens]
 emb|CAI30265.1| hypothetical protein [Pongo abelii]
Length=87

 Score = 32.0 bits (71),  Expect = 1.6, Method: Compositional matrix adjust.
 Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 1/50 (2%)

Query  6   IKVMVEYCGSXGYKPSFNNLSNSIKNSFS-QIVIEGKAIAGNTGCFEVYI  54
           + V V YCG+ GYK  +  L   +++ F  ++ I G+     TG FEV +
Sbjct  3   LAVRVVYCGAUGYKSKYLQLKKKLEDEFPGRLDICGEGTPQATGFFEVMV  52


>ref|NP_001159517.1| selenoprotein V [Sus scrofa]
 gb|ACV87533.1| selenoprotein V [Sus scrofa]
Length=342

 Score = 32.7 bits (73),  Expect = 1.8, Method: Composition-based stats.
 Identities = 19/54 (35%), Positives = 28/54 (52%), Gaps = 1/54 (2%)

Query  2    MDNQIKVMVEYCGSXGYKPSFNNLSNSIKNSFSQ-IVIEGKAIAGNTGCFEVYI  54
            +DN+I + V YCG   Y   +  L  S++  F   +V E    A  TG FEV++
Sbjct  255  VDNKILIRVVYCGLUSYGLRYILLKKSLEQQFPNCLVFEEDISAQATGAFEVFV  308


>gb|ACL81234.1| selenoprotein W [Moneuplotes crassus]
Length=94

 Score = 32.0 bits (71),  Expect = 1.8, Method: Compositional matrix adjust.
 Identities = 19/56 (34%), Positives = 28/56 (50%), Gaps = 3/56 (5%)

Query  2   MDNQIK--VMVEYCGSXGYKPSFNNLSNSIKNSF-SQIVIEGKAIAGNTGCFEVYI  54
           MD+  K  ++V YCG  GY P    +  +++N F      + KA  G TG  EV +
Sbjct  1   MDSTTKGHIVVNYCGGUGYLPKARYVQEAVENRFPGDFSFDLKADVGKTGRLEVTV  56


>ref|XP_968954.1| PREDICTED: similar to selenoprotein W2 [Tribolium castaneum]
 gb|EEZ98745.1| hypothetical protein TcasGA2_TC001303 [Tribolium castaneum]
Length=96

 Score = 32.0 bits (71),  Expect = 1.9, Method: Compositional matrix adjust.
 Identities = 17/49 (35%), Positives = 24/49 (49%), Gaps = 2/49 (4%)

Query  6   IKVMVEYCGSXGYKPSFNNLSNSIKNSFSQIVIEGKAIAGNTGCFEVYI  54
           ++V VE+CG+ GY   F  L+  IK     I + G    G    FEV +
Sbjct  3   VEVDVEFCGTCGYFKKFEELAQHIKAKHPDIELNGH--EGRRATFEVKV  49


>gb|EGB03200.1| selenoprotein [Aureococcus anophagefferens]
 gb|EGB04847.1| selenoprotein [Aureococcus anophagefferens]
Length=87

 Score = 31.6 bits (70),  Expect = 2.3, Method: Compositional matrix adjust.
 Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 1/50 (2%)

Query  6   IKVMVEYCGSXGYKPSFNNLSNSIKNSFS-QIVIEGKAIAGNTGCFEVYI  54
           + V ++YCG  GYK     L+ +I+  F+ Q+ +      G TG FEV +
Sbjct  3   VAVNIQYCGGUGYKKFSVALAETIEKEFTGQVTVTQVGDPGTTGNFEVTV  52


>ref|XP_001693901.1| selenoprotein W1 [Chlamydomonas reinhardtii]
 gb|AAN32901.1| selenoprotein SelW1 [Chlamydomonas reinhardtii]
 gb|EDP02837.1| selenoprotein W1 [Chlamydomonas reinhardtii]
Length=88

 Score = 31.6 bits (70),  Expect = 2.4, Method: Compositional matrix adjust.
 Identities = 18/51 (35%), Positives = 27/51 (53%), Gaps = 2/51 (4%)

Query  6   IKVMVEYCGSXGYKPSFNNLSNSIKNSF--SQIVIEGKAIAGNTGCFEVYI  54
           ++V V YCG  GY   + +L N+I+  F  + I    +A    TG FEV +
Sbjct  4   VQVHVLYCGGUGYGSRYRSLENAIRMKFPNADIKFSFEATPQATGFFEVEV  54


>ref|NP_999142.1| selenoprotein W [Sus scrofa]
 sp|Q95KL4.4|SELW_PIG RecName: Full=Selenoprotein W; Short=SelW
 gb|AAK56322.1|AF380118_1 selenoprotein W [Sus scrofa]
Length=87

 Score = 31.6 bits (70),  Expect = 2.7, Method: Compositional matrix adjust.
 Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 1/50 (2%)

Query  6   IKVMVEYCGSXGYKPSFNNLSNSIKNSF-SQIVIEGKAIAGNTGCFEVYI  54
           + V V YCG+ GYK  +  L   +++ F  ++ I G+     TG FEV +
Sbjct  3   VAVRVVYCGAUGYKSKYLQLKKKLEDEFPGRLDICGEGTPQVTGFFEVLV  52


>gb|AEG60881.1| SelT/selW/selH selenoprotein [Desulfotomaculum ruminis DSM 2154]
Length=78

 Score = 31.2 bits (69),  Expect = 3.1, Method: Compositional matrix adjust.
 Identities = 15/49 (31%), Positives = 27/49 (55%), Gaps = 0/49 (0%)

Query  4   NQIKVMVEYCGSXGYKPSFNNLSNSIKNSFSQIVIEGKAIAGNTGCFEV  52
           +++K+ VEYC S GY P    L+ ++  ++   +   + I  + G FEV
Sbjct  2   SEVKLSVEYCTSUGYLPKAAGLAENLLRAYRNKISSFELIPSSGGVFEV  50


>ref|ZP_09454520.1| ABC transporter substrate-binding protein [Lactobacillus zeae 
KCTC 3804]
Length=319

 Score = 31.6 bits (70),  Expect = 5.6, Method: Compositional matrix adjust.
 Identities = 14/36 (39%), Positives = 19/36 (53%), Gaps = 0/36 (0%)

Query  18   YKPSFNNLSNSIKNSFSQIVIEGKAIAGNTGCFEVY  53
            Y+   N L  S KN F +I  E K I  + GCF+ +
Sbjct  186  YEAKLNKLHQSAKNKFDKIPAEKKLIVTSEGCFKYF  221


>ref|NP_001156716.1| selenoprotein V [Bos taurus]
 gb|DAA19974.1| selenoprotein V [Bos taurus]
Length=381

 Score = 30.8 bits (68),  Expect = 9.3, Method: Composition-based stats.
 Identities = 17/53 (32%), Positives = 29/53 (55%), Gaps = 1/53 (2%)

Query  3    DNQIKVMVEYCGSXGYKPSFNNLSNSIKNSF-SQIVIEGKAIAGNTGCFEVYI  54
            +N+I + V YCG   Y   +  L  S++  F + ++ E +  A  TG FEV++
Sbjct  291  ENKIMIRVVYCGLUSYSLRYILLRKSLEQQFPNSLIFEEEISAQATGEFEVFV  343


  Database: All non-redundant GenBank CDS translations+PDB+SwissProt+PIR+PRF
excluding environmental samples from WGS projects
    Posted date:  Jan 11, 2012  4:12 PM
  Number of letters in database: 1,516,989,569
  Number of sequences in database:  16,927,445

Lambda     K      H
   0.327    0.141    0.426 
Gapped
Lambda     K      H
   0.267   0.0410    0.140 
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 16927445
Number of Hits to DB: 52636798
Number of extensions: 1346500
Number of successful extensions: 3636
Number of sequences better than 100: 5
Number of HSP's better than 100 without gapping: 0
Number of HSP's gapped: 3636
Number of HSP's successfully gapped: 5
Length of query: 54
Length of database: 5811956865
Length adjustment: 27
Effective length of query: 27
Effective length of database: 5354915850
Effective search space: 144582727950
Effective search space used: 144582727950
T: 11
A: 40
X1: 15 (7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (20.0 bits)
S2: 68 (30.8 bits)