T-COFFEE, Version_7.54(Tue Jan 13 18:15:23 WEST 2009)
Cedric Notredame 
CPU TIME:0 sec.
SCORE=85
*
 BAD AVG GOOD
*
PHYCAscaffold_2   :  85
SPP00000015_1.0   :  85
cons              :  85

PHYCAscaffold_2   ----KYVSQEGSEKLLTYEYHGADNSLIYKHVLTPMNNFLVELLP
SPP00000015_1.0   MAGYEYVSPEQLAGFDKYKYSAVDTNPLSLYVMHPFWNTIVKVFP

cons                  :*** *    : .*:* ..*.. :  :*: *: * :*:::*


PHYCAscaffold_2   LWLAPNLITLIGLVLVGGTHTLFVFLCPLLEGDAP------WWAM
SPP00000015_1.0   TWLAPNLITFSGFLLVVFNFLLMAYFDPDFYASAPGHKHVPDWVW

cons               ********: *::**  .. *:.:: * : ..**       *. 


PHYCAscaffold_2   VVAGAALFGYQTLDNLDGKQARRTKSSSPLGLLFDHGCDALNVSV
SPP00000015_1.0   IVVGILNFVAYTLDGVDGKQARRTNSSTPLGELFDHGLDSWSCVY

cons              :*.*   *   ***.:********:**:*** ***** *: .   


PHYCAscaffold_2   GTMTMASILQMGTTWRTLGFVL-----SAHFVFIFATWEEYYSGS
SPP00000015_1.0   FVVTVYSIFGRGSTGVSV-FVLYLLLWVVLFSFILSHWEKYNTGI

cons               .:*: **:  *:*  :: ***      . * **:: **:* :* 


PHYCAscaffold_2   LELPIINGPTEGILIGIALKLFTAVVGVDFWNEEIIDGVQNNSLF
SPP00000015_1.0   LFLPWGYDISQ-VTISF-VYIVTAVVGVEAWYEPFLFNFLYRDLF

cons              * **   . :: : *.: : :.******: * * :: ..  ..**


PHYCAscaffold_2   VI-VTMISSCFTLLVKFYSVRNALHAVRLNQDSVLVAFTRLLPFL
SPP00000015_1.0   TAMIIGCALCVTLPMSLLNFFRSYKNNTLKLNSVYEAMVPLFSPC

cons              .  :   : *.** :.: .. .: :   *: :**  *:. *:.  


PHYCAscaffold_2   ILNTLAGLWALYSPSDIFSTHPRMFLWMLGLLNSKLVVRPNCLMY
SPP00000015_1.0   LLFILSTAWILWSPSDILELHPRVFYFMVGTAFAN----STC---

cons              :*  *:  * *:*****:. ***:* :*:*   ::    ..*   


PHYCAscaffold_2   YLSERLTLIPTCSNGLHLMLAHLCGEEYHPFRKTLVPIFYV----
SPP00000015_1.0   ----------------QLIVCQMSSTRCPTLNWLLVPLFLVVLVV

cons                              :*::.::.. .  .:.  ***:* *    


PHYCAscaffold_2   ---------------------------------------------
SPP00000015_1.0   NLGVASYVESILLYTLTTAFTLAHIHYGVRVVKQLSSHFQIYPFS

cons                                                           


PHYCAscaffold_2   ----------------AG
SPP00000015_1.0   LRKPNSDULGMEEKNIGL

cons                              .