T-COFFEE, Version_7.54(Tue Jan 13 18:15:23 WEST 2009)
Cedric Notredame 
CPU TIME:0 sec.
SCORE=84
*
 BAD AVG GOOD
*
SelI_Phytophtor   :  84
PHYCAscaffold_2   :  84
cons              :  84

SelI_Phytophtor   MSNATYESETAVEASQIHALKQRVRHRSIGDGKSTYFGKYVSQEG
PHYCAscaffold_2   ---------------------------------------------

cons                                                           


SelI_Phytophtor   SEKLRTYEYHGADNSLVYKVLTPMNNFLVKLLPLWLAPNLITLIG
PHYCAscaffold_2   ---------------------------------------------

cons                                                           


SelI_Phytophtor   LILVGGSHTLFVFLCPFLVGDAPWWAMVVAALALFTYQTLDNLDG
PHYCAscaffold_2   -------------------------------LLITVYQILDVADG

cons                                             * : .** **  **


SelI_Phytophtor   KQARRTKSSSPLGLLFDHGCVALNVSVGTMTMASILQMGTTWRTL
PHYCAscaffold_2   KQARKTGNSSPLGLLFDHGCDALNVVVSACTFASTIMLGPTYWSL

cons              ****:* .************ **** *.: *:** : :*.*: :*


SelI_Phytophtor   GFVLSGHFVFIFATWE-YYSGSLELPLYNGPTEGYLIGIALKLVT
PHYCAscaffold_2   LIFLAPAMVFFMATWEEYYTGTLALPIINGPNEGLLIMYSIYIGT

cons               :.*:  :**::**** **:*:* **: ***.** **  :: : *


SelI_Phytophtor   AVVGVGFWNQEMI--EGVQNNSLFVIVTMISSCFTLLVKYVGGLI
PHYCAscaffold_2   AIVGPTVWTQPNILFPDLNNNHVFVLITITSAIGQCLF--SGEL-

cons              *:**  .*.*  *   .::** :**::*: *:    *.   * * 


SelI_Phytophtor   FCIPAVRFANLSMFCFIT-SVRNALHAVRLNQDSVLVAFTRLLPF
PHYCAscaffold_2   YVFIYFFAKNLTV-CAVFRVAIVAIRSMERKAKDGAAALFGITPF

cons              : :  .   **:: * :   .  *::::. : ..  .*:  : **


SelI_Phytophtor   VVINTLAGLWALYSPSDIFSTHPRMFLWMLGLLNSKLVLHLMLAH
PHYCAscaffold_2   IALVFLSALWVLWSPSDVFTDHPRLLIWTVGFVFAKMVMHMMLSH

cons              :.:  *:.**.*:****:*: ***:::* :*:: :*:*:*:**:*


SelI_Phytophtor   LCGEEYHPFRKTLVPIFYVAGHCAFCMVEGIYDAINEELIVREFF
PHYCAscaffold_2   MCEEPYWLLRKTF--------------------------------

cons              :* * *  :***:                                


SelI_Phytophtor   FLSLSAAVHIVITVVWEVKNVLGVSVFTIPHSSKFKLKTNSKPAA
PHYCAscaffold_2   ---------------------------------------------

cons                                                           


SelI_Phytophtor   KSSXFVGHAVG
PHYCAscaffold_2   ----------L

cons