BLASTP 2.2.16 [Mar-25-2007]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= supercont1.194:subseq(22369,4227) of Sphaeroforma arctica
JP610:[translate(1)]
         (41 letters)

Database: All non-redundant GenBank CDS
translations+PDB+SwissProt+PIR+PRF excluding environmental samples
from WGS projects
           16,352,912 sequences; 1,327,212,733 total letters

Searching... please wait.. done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA25449.1| CDPalcohol phosphatidyltransferase putative [Alb...    35   0.12 

>emb|CCA25449.1| CDPalcohol phosphatidyltransferase putative [Albugo laibachii Nc14]
          Length = 411

 Score = 35.4 bits (80), Expect = 0.12
 Identities = 14/24 (58%), Positives = 17/24 (70%)

Query: 18  AHLCEEEYRPWGKTFTAVFAMACH 41
           AHLC EEYRP+ KT   +F +A H
Sbjct: 319 AHLCGEEYRPFRKTLVPIFFVAAH 342


  Database: All non-redundant GenBank CDS
  translations+PDB+SwissProt+PIR+PRF excluding environmental samples
  from WGS projects
    Posted date:  Nov 28, 2011  1:35 PM
  Number of letters in database: 1,327,212,733
  Number of sequences in database:  16,352,912
  
Lambda     K      H
   0.330    0.137 5.30e-313 

Gapped
Lambda     K      H
   0.267   0.0410 5.30e-313 

Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 16352912
Number of Hits to DB: 23842444
Number of extensions: 245715
Number of successful extensions: 533
Number of sequences better than 10: 0
Number of HSP's better than 10 without gapping: 0
Number of HSP's gapped: 533
Number of HSP's successfully gapped: 0
Length of query: 41
Length of database: 5622180029
Length adjustment: 15
Effective length of query: 26
Effective length of database: 5376886349
Effective search space: 139799045074
Effective search space used: 139799045074
T: 11
A: 40
X1: 15 (7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (20.0 bits)
S2: 76 (33.9 bits)

