T-COFFEE, Version_7.54(Tue Jan 13 18:15:23 WEST 2009)
Cedric Notredame 
CPU TIME:0 sec.
SCORE=98
*
 BAD AVG GOOD
*
PHYCAscaffold_4   :  98
SPS1.HUMAN.gi|1   :  98
cons              :  98

PHYCAscaffold_4   ---------------------------------------------
SPS1.HUMAN.gi|1   MSTRESFNPESYELDKSFRLTRFTELKGTGCKVPQDVLQKLLESL

cons                                                           


PHYCAscaffold_4   ---------------------GMDSSVVKISHGTDLYLVSTTDFF
SPS1.HUMAN.gi|1   QENHFQEDEQFLGAVMPRLGIGMDTCVIPLRHG-GLSLVQTTDYI

cons                                   ***:.*: : ** .* **.***::


PHYCAscaffold_4   FPSVEDPYVQGKIACANVLSDAYAMGVTEVDTMLMILGVCRDMSE
SPS1.HUMAN.gi|1   YPIVDDPYMMGRIACANVLSDLYAMGVTECDNMLMLLGVSNKMTD

cons              :* *:***: *:********* ******* *.***:***...*::


PHYCAscaffold_4   KQRDVVTTQMIRGFNDLARQAHTNVTGGQTVMNPWPIVGGVAMSV
SPS1.HUMAN.gi|1   RERDKVMPLIIQGFKDAAEEAGTSVTGGQTVLNPWIVLGGVATTV

cons              ::** * . :*:**:* *.:* *.*******:*** ::**** :*


PHYCAscaffold_4   RSESQIIRPENAVVGDVIILTKPLGTQVAVNLFQWKKKPERWQRV
SPS1.HUMAN.gi|1   CQPNEFIMPDNAVPGDVLVLTKPLGTQVAVAVHQWLDIPEKWNKI

cons               . .::* *:*** ***::*********** :.** . **:*:::


PHYCAscaffold_4   ESIVTPEDADVAFQMASESMSRLNLNAAKMMHKYGAHSATDVTGF
SPS1.HUMAN.gi|1   KLVVTQEDVELAYQEAMMNMARLNRTAAGLMHTFNAHAATDITGF

cons              : :** **.::*:* *  .*:*** .** :**.:.**:***:***


PHYCAscaffold_4   GIVAHARNQAKSQLGDVSFEIHTLPIIKNMAKVNEAIGNSFKLLD
SPS1.HUMAN.gi|1   GILGHAQNLAKQQRNEVSFVIHNLPVLAKMAAVSKACGNMFGLMH

cons              **:.**:* **.* .:*** **.**:: :** *.:* ** * *:.


PHYCAscaffold_4   GFAAETSGGLLLCLPAENADAYIKEL---RELDGKPAWVVGRVVA
SPS1.HUMAN.gi|1   GTCPETSGGLLICLPREQAARFCAEIKSPKYGEGHQAWIIGIVEK

cons              * ..*******:*** *:*  :  *:   :  :*: **::* *  


PHYCAscaffold_4   GSKDAYIAPDSKVIEVTP--------------E
SPS1.HUMAN.gi|1   GNRTARIIDKPRIIEVAPQVATQNVNPTPGATS

cons              *.: * *  ..::***:*              .