T-COFFEE, Version_7.54(Tue Jan 13 18:15:23 WEST 2009)
Cedric Notredame
CPU TIME:0 sec.
SCORE=90
*
BAD AVG GOOD
*
PHYCAscaffold_1 : 90
SECP43.HUMAN.gi : 90
cons : 90
PHYCAscaffold_1 ---TLWMGDIQMHWDETFIASLFTTAVEQP-VIKLIRDKVTGYPA
SECP43.HUMAN.gi MAASLWMGDLEPYMDENFISRAFATMGETVMSVKIIRNRLTGIPA
cons :*****:: : **.**: *:* * :*:**:::** **
PHYCAscaffold_1 GYGFLEFPTQQGAQQVLEAYNGQLIRLANTMHRFRMNWGAGGRRI
SECP43.HUMAN.gi GYCFVEFADLATAEKCLHKINGKPLPGATPAKRFKLNYATYGKQP
cons ** *:**. *:: *. **: : *.. :**::*:.: *::
PHYCAscaffold_1 ETSDDHSIFVGDLAPDVTDELLLSTFNARFTSVRGAKVVIDPITR
SECP43.HUMAN.gi DNSPEYSLFVGDLTPDVDDGMLYEFFVKVYPSCRGGKVVLDQ-TG
cons :.* ::*:*****:*** * :* . * :.* **.***:* *
PHYCAscaffold_1 MSKGFGFVRFGSKEEADQALQTMNG-VYCSSRPMRVSVATERNK-
SECP43.HUMAN.gi VSKGYGFVKFTDELEQKRALTECQGAVGLGSKPVRLSVAIPKASR
cons :***:***:* .: * .:** :* * .*:*:*:*** : .
PHYCAscaffold_1 ---------------SRQQNYYNYSAAYGYPQYQQGAYGYAAYGQ
SECP43.HUMAN.gi VKPVEYSQMYSYSYNQYYQQYQNYYAQWGYDQ-NTGSYSYS-YPQ
cons . *:* ** * :** * : *:*.*: * *
PHYCAscaffold_1 YGQQGNQSQG-----------------------------------
SECP43.HUMAN.gi YGYTQSTMQTYEEVGDDALEDPMPQLDVTEANKEFMEQSEELYDA
cons ** . *
PHYCAscaffold_1 ----------------GYQQ
SECP43.HUMAN.gi LMDCHWQPLDTVSSEIPAMM
cons