T-COFFEE, Version_7.54(Tue Jan 13 18:15:23 WEST 2009)
Cedric Notredame 
CPU TIME:0 sec.
SCORE=86
*
 BAD AVG GOOD
*
Lt_contig2959_s   :  86
eEFsec.Human.SP   :  86
cons              :  86

Lt_contig2959_s   -----LNVNIGLLGHVDSGKTALAKALSSTASTAAFDKSPQSQSR
eEFsec.Human.SP   MAGRRVNVNVGVLGHIDSGKTALARALSTTASTAAFDKQPQSRER

cons                   :***:*:***:********:***:*********.***:.*


Lt_contig2959_s   GITLDLGFSACEVSIEDGNEDLTNVLRAADL-------TKLQCTL
eEFsec.Human.SP   GITLDLGFSCFSVPLPARLRSSLPEFQAAPEAEPEPGEPLLQVTL

cons              *********. .*.:    ..    ::**         . ** **


Lt_contig2959_s   VDCPGHASLIRTVVGGAQIIDVIVLVIDATKGMQVQTGECLVLGE
eEFsec.Human.SP   VDCPGHASLIRTIIGGAQIIDLMMLVIDVTKGMQTQSAECLVIGQ

cons              ************::*******:::****.*****.*:.****:*:


Lt_contig2959_s   VLAKPLVVVLNKVDAIQGATPEAK-VAALAALRRKLQQTFRRTRW
eEFsec.Human.SP   IACQKLVVVLNKIDLL----PEGKRQAAIDKMTKKMQKTLENTKF

cons              : .: *******:* :    **.*  **:  : :*:*:*:..*::


Lt_contig2959_s   PTVAIVEVAAAPLNTEAVLPQVLRAV-DLAALKAAKESEFER--P
eEFsec.Human.SP   RGAPIIPVAAKPGGPEAPETEAPQGIPELIELLTSQISIPTRDPS

cons                ..*: *** * ..**  .:. :.: :*  * ::: *   *  .


Lt_contig2959_s   AQFYMLVDHCFPVRGQGTVFTGTVVAGVVRVGDTVLVPEMQTTRK
eEFsec.Human.SP   GPFLMSVDHCFSIKGQGTVMTGTILSGSISLGDSVEIPALKVVKK

cons              . * * *****.::*****:***:::* : :**:* :* ::..:*


Lt_contig2959_s   VKGLQMFHKPVESAKSGDRVGLCVAQFDPAWMERGVLCSAASSGR
eEFsec.Human.SP   VKSMQMFHMPITSAMQGDRLGICVTQFDPKLLERGLVCAPES---

cons              **.:**** *: ** .***:*:**:****  :***::*:. *   


Lt_contig2959_s   MLMSSSQLIARVHRVRYHPLPCDTHTKFHITIGHATRMGTMRYFA
eEFsec.Human.SP   -LHTVHAALISVEKIPYFRGPLQTKAKFHITVGHETVMGRLMFFS

cons               * :    :  *.:: *.  * :*::*****:** * ** : :*:


Lt_contig2959_s   RPPCMSEGLDVPGAVASFDSSIESAYVEELDDSVVASYSSTDATA
eEFsec.Human.SP   PAP---DNFDQEPILDSFNFSQEYLFQEQ--------YLSKDLTP

cons               .*   :.:*    : **: * *  : *:        * *.* *.


Lt_contig2959_s   CVPGRPLPVAQAGQ--------DYYAVLLLERPVLAAPGVSMIAM
eEFsec.Human.SP   AVTDNDEADKKAGQATEGHCPRQQWALVEFEKPVTCPRLCLVIGS

cons              .*...  .  :***        : :*:: :*:** ..    :*. 


Lt_contig2959_s   RLDVE-RENFCRIALAGTVC-------------------------
eEFsec.Human.SP   RLDADIHTNTCRLAFHGILLHGLEDRNYADSFLPRLKVYKLKHKH

cons              ***.: : * **:*: * :                          


Lt_contig2959_s   ---------------------------------------------
eEFsec.Human.SP   GLVERAMDDYSVIGRSLFKKETNIQLFVGLKVHLSTGELGIIDSA

cons                                                           


Lt_contig2959_s   ---------------------------------------------
eEFsec.Human.SP   FGQSGKFKIHIPGGLSPESKKILTPALKKRARAGRGEATRQEESA

cons                                                           


Lt_contig2959_s   -----------------------------H
eEFsec.Human.SP   ERSEPSQHVVLSLTFKRYVFDTHKRMVQSP

cons