T-COFFEE, Version_7.54(Tue Jan 13 18:15:23 WEST 2009)
Cedric Notredame 
CPU TIME:0 sec.
SCORE=91
*
 BAD AVG GOOD
*
scaffold_30_sub   :  91
eEFsec.Human.SP   :  91
cons              :  91

scaffold_30_sub   -----ININVGILGHVDSGKTSLVKTLSTLLSTASLDKSKQSRQR
eEFsec.Human.SP   MAGRRVNVNVGVLGHIDSGKTALARALSTTASTAAFDKQPQSRER

cons                   :*:***:***:*****:*.::***  ***::**. ***:*


scaffold_30_sub   GMTLDLGFSCFFMDLPERLKLQLQASSNNKSKSKSNKLKYLQMTL
eEFsec.Human.SP   GITLDLGFSCFSVPLPARLRSSLPEFQAAPEAEPEPGEPLLQVTL

cons              *:********* : ** **: .*   .   . . .     **:**


scaffold_30_sub   VDCPGHASLIRTIIGGAQIIDIVLLVVDAYKGWQAQTTECLVLAE
eEFsec.Human.SP   VDCPGHASLIRTIIGGAQIIDLMMLVIDVTKGMQTQSAECLVIGQ

cons              *********************:::**:*. ** *:*::****:.:


scaffold_30_sub   LTSSTLIIALNKIDMFPIAEREQRLQEATQKVRERLKQSTKFNDP
eEFsec.Human.SP   IACQKLVVVLNKIDLLPEGKRQAAIDKMTKKMQKTLE-NTKFRG-

cons              ::...*::.*****::* .:*:  ::: *:*::: *: .***.. 


scaffold_30_sub   SQVPIIGVSACMGGEKVAAVAIDKAPSSSTSSTITKGSSTNSNSN
eEFsec.Human.SP   --APIIPVAAKPGGPEAPETEAPQGIPELIELLTSQISIPTRDPS

cons                .*** *:*  ** :.. .   :. ..  .   :: * .. :..


scaffold_30_sub   SNFYFAIDHCFPIKGMGTVLTGTCLNGSINVNDIIEFPSLGNLQR
eEFsec.Human.SP   GPFLMSVDHCFSIKGQGTVMTGTILSGSISLGDSVEIPALK-VVK

cons              . * :::****.*** ***:*** *.***.:.* :*:*:*  : :


scaffold_30_sub   KVKSIQMFKRRCLKIQQGDRAGICVSNFDSTSLERGVCSTPGSVK
eEFsec.Human.SP   KVKSMQMFHMPITSAMQGDRLGICVTQFDPKLLERGLVCAPESLH

cons              ****:***:    .  **** ****::**.. ****: .:* *::


scaffold_30_sub   YVKGGIALVRKIIPHYKGPYLKNKSKYHVSVGHSTVMATVSFWDW
eEFsec.Human.SP   TVHAALISVEK-IPYFRGP-LQTKAKFHITVGHETVMGRLMFFSP

cons               *:..:  *.* **:::** *:.*:*:*::***.***. : *:. 


scaffold_30_sub   KEDFLLQDGLVDSLTKDNEHDASLGGVSSTKTNGSNGNDQDNNGT
eEFsec.Human.SP   APDNFDQEPILDSFNFSQEYLFQEQYLSKDLTPAVTDNDEADKKA

cons                * : *: ::**:. .:*:  .   :*.  * . ..**: :: :


scaffold_30_sub   IKNNKQKQPESLLHWAILDFQTPVYCPLQSLIIGSRLDAPVEASS
eEFsec.Human.SP   GQATEGHCPRQ--QWALVEFEKPVTCPRLCLVIGSRLDADIHTNT

cons               : .: : *..  :**:::*:.** **  .*:******* :.:.:


scaffold_30_sub   CRLAFCGRLIERLTDPS---KDIHKIRWYTPKEKRGIVSRLAVRY
eEFsec.Human.SP   CRLAFHGILLHGLEDRNYADSFLPRLKVYKLKHKHGLVERAMDDY

cons              ***** * *:. * * .   . : ::: *. *.*:*:*.*    *


scaffold_30_sub   ELYGSDLFKKETLLKPFLGMKLITYPSNDIGELKSAFGTSGKFRV
eEFsec.Human.SP   SVIGRSLFKKETNIQLFVGLKV-HLSTGELGIIDSAFGQSGKFKI

cons              .: * .****** :: *:*:*:   .:.::* :.**** ****::


scaffold_30_sub   VFPSGTTAKENDILR------------------------------
eEFsec.Human.SP   HIPGGLSPESKKILTPALKKRARAGRGEATRQEESAERSEPSQHV

cons               :*.* :.:.:.**                               


scaffold_30_sub   ---LPFK-------------R
eEFsec.Human.SP   VLSLTFKRYVFDTHKRMVQSP

cons                 *.**