T-COFFEE, Version_7.54(Tue Jan 13 18:15:23 WEST 2009)
Cedric Notredame
CPU TIME:0 sec.
SCORE=98
*
BAD AVG GOOD
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contig_09_subse : 98
OPtRNAsecSTHuma : 98
cons : 98
contig_09_subse MDDRSLKLAEDFVSARYIEAGRESLRATARIMRSILAQRCCPDEG
OPtRNAsecSTHuma MNRESFAAGERLVSPAYVRQGCEARRSHEHLIRLLLEKGKCPENG
cons *: .*: .* :**. *:. * *: *: :::* :* : **::*
contig_09_subse LTDAAIELILRQLSLMDTNNLAHHVGGGEREGRVVSALVRMRHFH
OPtRNAsecSTHuma WDESTLELFLHELAIMDSNNFLGNCGVGEREGRVASALVARRHYR
cons ::::**:*::*::**:**: : * *******.**** **::
contig_09_subse LTHGIGRSGDLFSEQPKAAGSSLLYKITNVLMLDLIRQAGAPSTA
OPtRNAsecSTHuma FIHGIGRSGDISAVQPKAAGSSLLNKITNSLVLDIIKLAGVHTVA
cons : ********: : ********** **** *:**:*: **. :.*
contig_09_subse AAVVVPMATGMTLALVLRCVAKTHATPRYVIWPRIDQKTALKCID
OPtRNAsecSTHuma NCFVVPMATGMSLTLCFLTLRHKRPKAKYIIWPRIDQKSCFKSMI
cons ..********:*:* : : :.:...:*:********:.:*.:
contig_09_subse AAGLVPVPTPTSSSSLFLECHVDDVAAAVNAVGGPSQVVCVLSTT
OPtRNAsecSTHuma TAGFEPVVIENVLEGDELRTDLKAVEAKVQEL-GPDCILCIHSTT
cons :**: ** . .. *. .:. * * *: : **. ::*: ***
contig_09_subse SCFAPRLPDNTVAIAQYCKKAGIPYVVNNAYGVQSRRIMTRLDAA
OPtRNAsecSTHuma SCFAPRVPDRLEELAVICANYDIPHIVNNAYGVQSSKCMHLIQQG
cons ******:**. :* * : .**::********* : * :: .
contig_09_subse QRLGRVDFVVQSGDKNFLVPVGGSIICSGDKERCKAVAALYAGRA
OPtRNAsecSTHuma ARVGRIDAFVQSLDKNFMVPVGGAIIAGFNDSFIQEISKMYPGRA
cons *:**:* .*** ****:*****:**.. :.. : :: :*.***
contig_09_subse SMSPIVDLFITALSLGRRGMQTLWSDRYKCRARLIRQLRVFARER
OPtRNAsecSTHuma SASPSLDVLITLLSLGSNGYKKLLKERKEMFSYLSNQIKKLSEAY
cons * ** :*::** **** .* :.* .:* : : * .*:: ::.
contig_09_subse REVL-----------------------------------------
OPtRNAsecSTHuma NERLLHTPHNPISLAMTLKTLDEHRDKAVTQLGSMLFTRQVSGAR
cons .* *
contig_09_subse ---------------------------------------------
OPtRNAsecSTHuma VVPLGSMQTVSGYTFRGFMSHTNNYPCAYLNAASAIGMKMQDVDL
cons
contig_09_subse ---------------------------------------------
OPtRNAsecSTHuma FIKRLDRCLKAVRKERSKESDDNYDKTEDVDIEEMALKLDNVLLD
cons
contig_09_subse ------L
OPtRNAsecSTHuma TYQDASS
cons