T-COFFEE, Version_7.54(Tue Jan 13 18:15:23 WEST 2009)
Cedric Notredame
CPU TIME:0 sec.
SCORE=91
*
BAD AVG GOOD
*
gi|340503345|gb : 91
OPtRNAsecSTHuma : 91
cons : 91
gi|340503345|gb --------SSHIISPQYIKSQ-NSFQTFSNTIKILLSRQLFPHPL
OPtRNAsecSTHuma MNRESFAAGERLVSPAYVRQGCEARRSHEHLIRLLLEKGKCPENG
cons ..:::** *::. :: ::..: *::**.: *.
gi|340503345|gb -PDLEIELLISQLSLMDTNNFSQKIGVGEREGRIIS-IVQKRHFY
OPtRNAsecSTHuma WDESTLELFLHELAIMDSNNFLGNCGVGEREGRVASALVARRHYR
cons : :**:: :*::**:*** : ********: * :* :**:
gi|340503345|gb MSHGIGRSGNLSAEQPKAPGSSLILKITEFLVKDMLKLVGLCKKS
OPtRNAsecSTHuma FIHGIGRSGDISAVQPKAAGSSLLNKITNSLVLDIIKLAGVHT-V
cons : *******::** ****.****: ***: ** *::**.*: .
gi|340503345|gb RNLLILPAATGMACFLTLMALKKNISEKKYVIWSRIDQKTCLKCI
OPtRNAsecSTHuma ANCFVVPMATGMSLTLCFLTLRHKRPKAKYIIWPRIDQKSCFKSM
cons * :::* ****: * :::*::: .: **:**.*****:*:*.:
gi|340503345|gb LAANLEPYVLELVI-GDKLCSDVEKLGKLLENNDFKKVLCVFSTT
OPtRNAsecSTHuma ITAGFEPVVIENVLEGDELRTDLKAVEAKVQELGPDCILCIHSTT
cons ::*.:** *:* *: **:* :*:: : ::: . . :**:.***
gi|340503345|gb SCFAPRIPDNITEIGRICFVNNIPHIVNNAYGLC-AKIVNLINET
OPtRNAsecSTHuma SCFAPRVPDRLEELAVICANYDIPHIVNNAYGVQSSKCMHLIQQ-
cons ******:**.: *:. ** :**********: :* ::**::
gi|340503345|gb YSKNHRIDAIISSTDKNFLVPVGGAIIYGEN-KLIKEINENYPGR
OPtRNAsecSTHuma GARVGRIDAFVQSLDKNFMVPVGGAIIAGFNDSFIQEISKMYPGR
cons :: ****::.* ****:******** * * .:*:**.: ****
gi|340503345|gb ASLSPIIDLFITFLSTGREKW-ELLNIRKENLIYLKEKLNVLL-K
OPtRNAsecSTHuma ASASPSLDVLITLLSLGSNGYKKLLKERKEMFSYLSNQIKKLSEA
cons ** ** :*::**:** * : : :**: *** : **.:::: *
gi|340503345|gb YEERVLST-ENSISVGFTLKNIK-NKNISILELGGILYNKRIMGG
OPtRNAsecSTHuma YNERLLHTPHNPISLAMTLKTLDEHRDKAVTQLGSMLFTRQVSGA
cons *:**:* * .*.**:.:***.:. ::: :: :**.:*:.::: *.
gi|340503345|gb RIIINNEKVLKIDNLFKNYGCSNDFYTELPYMTVACAIGMEKKEI
OPtRNAsecSTHuma RVVPLGSMQTVSGYTFRGFMSHTNNYP-CAYLNAASAIGMKMQDV
cons *:: .. . *:.: . .: *. .*:..*.****: :::
gi|340503345|gb DMFLIK---------------------------------------
OPtRNAsecSTHuma DLFIKRLDRCLKAVRKERSKESDDNYDKTEDVDIEEMALKLDNVL
cons *:*: :
gi|340503345|gb --------L
OPtRNAsecSTHuma LDTYQDASS
cons