T-COFFEE, Version_7.54(Tue Jan 13 18:15:23 WEST 2009)
Cedric Notredame
CPU TIME:0 sec.
SCORE=97
*
BAD AVG GOOD
*
scaffold_2_subs : 97
OPtRNAsecSTHuma : 97
cons : 97
scaffold_2_subs ---------------------------------------------
OPtRNAsecSTHuma MNRESFAAGERLVSPAYVRQGCEARRSHEHLIRLLLEKGKCPENG
cons
scaffold_2_subs ------------------------CGVGEREGRVFSSLVSQRHYG
OPtRNAsecSTHuma WDESTLELFLHELAIMDSNNFLGNCGVGEREGRVASALVARRHYR
cons ********** *:**::***
scaffold_2_subs LSHGMGRSGDITEPQPKAAGSSALVKLALLLTLDALRRGSKLDAK
OPtRNAsecSTHuma FIHGIGRSGDISAVQPKAAGSSLLNKITNSLVLDII----KLAGV
cons : **:******: ******** * *:: *.** : ** .
scaffold_2_subs GPAAYGILLPLCTGMSISLLLASIRSKEENSETKKDIVLWSRIDQ
OPtRNAsecSTHuma HTVANCFVVPMATGMSLTLCFLTLRHKRP----KAKYIIWPRIDQ
cons ..* :::*:.****::* : ::* *. * . ::*.****
scaffold_2_subs KSCFKAIHSAGLICVVVPTKIEGDEVITDIDAMEAALSKH-EGRV
OPtRNAsecSTHuma KSCFKSMITAGFEPVVIENVLEGDELRTDLKAVEAKVQELGPDCI
cons *****:: :**: **: . :****: **:.*:** :.: . :
scaffold_2_subs LAVITTSSCFTPRVPDAVDKVAKLCKVSNVYHIINNAYGLQCAKT
OPtRNAsecSTHuma LCIHSTTSCFAPRVPDRLEELAVICANYDIPHIVNNAYGVQSSKC
cons *.: :*:***:***** ::::* :* :: **:*****:*.:*
scaffold_2_subs SKLINRACVVGRVDAVVCSTDKNFLVPVGGAIIISPSKNIIGEVG
OPtRNAsecSTHuma MHLIQQGARVGRIDAFVQSLDKNFMVPVGGAIIAGFNDSFIQEIS
cons :**::.. ***:**.* * ****:******** . ...:* *:.
scaffold_2_subs KVYAGRASSSPIVDLFITLLSMGMNGYKRLLKERTSVLETFPERL
OPtRNAsecSTHuma KMYPGRASASPSLDVLITLLSLGSNGYKKLLKERKEMFSYLSNQI
cons *:*.****:** :*::*****:* ****:*****..::. :.:::
scaffold_2_subs REVAEKHGERILVCPNNTVSFGLTLDGLARPKAKEITSFGAMLFS
OPtRNAsecSTHuma KKLSEAYNERLLHTPHNPISLAMTLKTLDEHRDKAVTQLGSMLFT
cons ::::* :.**:* *:*.:*:.:**. * . : * :*.:*:***:
scaffold_2_subs RCVSGTRVVPRSQLKSIGGQDFIGFGSSTNEYPHAYMTAACAIGV
OPtRNAsecSTHuma RQVSGARVVPLGSMQTVSGYTFRGFMSHTNNYPCAYLNAASAIGM
cons * ***:**** ..::::.* * ** * **:** **:.**.***:
scaffold_2_subs SIFEIEEFYVRLDKTLTEFKRKKKKK-------------------
OPtRNAsecSTHuma KMQDVDLFIKRLDRCLKAVRKERSKESDDNYDKTEDVDIEEMALK
cons .: ::: * ***: *. .::::.*:
scaffold_2_subs -------------A
OPtRNAsecSTHuma LDNVLLDTYQDASS
cons :