
genewise output
Score 18.91 bits over entire alignment
Scores as bits over a synchronous coding model

Warning: The bits scores is not probablistically correct for single seqs
See WWW help for more info

SPP00000059_1.0   89 FSESVGQDAN-IVRIVDRSHGMHRTEVRCKTC                  
                     F+ S+ Q +  +  + DRSH +HR E  C  C                  
                     FAHSIQQQSGPLCGVTDRSH-LHRGEGTCCFC                  
PHYCAscaffold_179931 tgctaccctgcctggagcac cccgggatttt                  
                     tcactaaacgctggtcagga taggagcggtg                  
                     tatgaagaagttccgtttcc ttccggttttc                  


//
>PHYCAscaffold_33:subseq(168963,188963).pep
FAHSIQQQSGPLCGVTDRSHLHRGEGTCCFC
//
PHYCAscaffold_33:subseq(168963,188963)	GeneWise	match	179931	180023	18.91	+	.	PHYCAscaffold_33:subseq(168963,188963)-genewise-prediction-1
PHYCAscaffold_33:subseq(168963,188963)	GeneWise	cds	179931	180023	0.00	+	0	PHYCAscaffold_33:subseq(168963,188963)-genewise-prediction-1
//

genewise output
Score 66.51 bits over entire alignment
Scores as bits over a synchronous coding model

Warning: The bits scores is not probablistically correct for single seqs
See WWW help for more info

SPP00000059_1.0   29 EWKSVLPNEVYRVARESGTETPHTGGFNDHFEKGRYVCLCCGSELFNSD 
                     EWK  L    ++V R  GTE   TG +N H E G YVC  C + ++ S  
                     EWKQRLTPMQFQVLRLKGTERAGTGEYNKHKETGVYVCAGCKTPVYTST 
PHYCAscaffold_-10392 gtacccacactcgcctagagcggaggtaacagaggtgtggtaacgtata 
                     agaagtcctatattgtagcagcgcgaaaaaaacgtatgcggacctaccc 
                     ggggtggcggcaggcggtgaacttagccgcggctgccttgcgttgcttc 


SPP00000059_1.0   78 AKFWAGCGWPAFSESV                                  
                      KF +GCGWPAF +++                                  
                     TKFDSGCGWPAFYDAI                                  
PHYCAscaffold_-10245 aatgtgtgtcgttgga                                  
                     catacggggcctaact                                  
                     agctgctcgtctccct                                  


//
>PHYCAscaffold_33:subseq(168963,188963).pep
EWKQRLTPMQFQVLRLKGTERAGTGEYNKHKETGVYVCAGCKTPVYTSTTKFDSGCGWPA
FYDAI
//
PHYCAscaffold_33:subseq(168963,188963)	GeneWise	match	10392	10198	66.51	-	.	PHYCAscaffold_33:subseq(168963,188963)-genewise-prediction-1
PHYCAscaffold_33:subseq(168963,188963)	GeneWise	cds	10392	10198	0.00	-	0	PHYCAscaffold_33:subseq(168963,188963)-genewise-prediction-1
//
