
genewise output
Score 75.32 bits over entire alignment
Scores as bits over a synchronous coding model

Warning: The bits scores is not probablistically correct for single seqs
See WWW help for more info

SPP00000022_1.0   66 LAKSEWQKKLTPEQFYVTREKGTEPPFSGIYLNNKEAGMYHCVCCDSPL 
                     ++  EW++ LT +++++ REKGT+P   G Y +  + G Y C  C +PL 
                     MSDEEWRRILTAQEYHILREKGTDP-VGGKYDDVFDEGEYVCAGCKTPL 
contig_28:subse10000 aagggtacacagcgtcaccgagagc gggatgggtggggtgtggtaacc 
                     tgaaagggttccaaaattgaagcac tggaaaattaagaatgcggacct 
                     gctagggtccaaggcttgtggctcc ctggccccccgggcgccgcgggt 


SPP00000022_1.0  115 FSSEKKYCSGTGWPSFSEAHGTSGSDESHTGILRRL--DTSLGSARTEV 
                     + S  K+  G GWP F +             I +R+         R E+ 
                     YLSSMKFACGCGWPGFYDC------------IPKRVREQPDKDGRRVEI 
contig_28:subse10144 tcttaatgtgtgtcgttgt            acacgcgccgaggccgga 
                     atcctatcgggggcgtaag            tcagtgaacaaagggtat 
                     cgccgacccctcgcgtccc            cagggcgggcgccctcgt 


SPP00000022_1.0  162 VCKQCEAHLGHVF-PDG---PGPNGQRFCINSVALKFKP           
                     VC  C +HLGHVF  +G   P PN  R C+NS ++ ++P           
                     VCNACNSHLGHVFRKEGFRNPPPN-ERHCVNSTSIILRP           
contig_28:subse10255 gtagtaaccgcgtcaggtcaccca gcctgaaataaccc           
                     tgacgagatgattgaagtgaccca agagtagcctttgc           
                     cccgcccccgccctggccacaagc ggccgcccccagac           


//
>contig_28:subseq(1044267,127458).pep
MSDEEWRRILTAQEYHILREKGTDPVGGKYDDVFDEGEYVCAGCKTPLYLSSMKFACGCG
WPGFYDCIPKRVREQPDKDGRRVEIVCNACNSHLGHVFRKEGFRNPPPNERHCVNSTSII
LRP
//
contig_28:subseq(1044267,127458)	GeneWise	match	10000	10368	89.30	+	.	contig_28:subseq(1044267,127458)-genewise-prediction-1
contig_28:subseq(1044267,127458)	GeneWise	cds	10000	10368	0.00	+	0	contig_28:subseq(1044267,127458)-genewise-prediction-1
//

genewise output
Score 24.84 bits over entire alignment
Scores as bits over a synchronous coding model

Warning: The bits scores is not probablistically correct for single seqs
See WWW help for more info

SPP00000022_1.0   24 LLRGLTLGTAPRRAVRGQAGGGGPGTGPGL                    
                     L +G +L    RRAV GQAG  G G G G+                    
                     LCQGASLLEGVRRAVPGQAGEEGRGDGAGV                    
contig_28:subs-57399 ctcggaccgggccggcgcgggggcgggggg                    
                     tgagcgttagtggctcgacgaagggagcgt                    
                     ccatttataagcagatgaataacttctcca                    


//
>contig_28:subseq(1044267,127458).pep
LCQGASLLEGVRRAVPGQAGEEGRGDGAGV
//
contig_28:subseq(1044267,127458)	GeneWise	match	57399	57310	24.84	-	.	contig_28:subseq(1044267,127458)-genewise-prediction-1
contig_28:subseq(1044267,127458)	GeneWise	cds	57399	57310	0.00	-	0	contig_28:subseq(1044267,127458)-genewise-prediction-1
//
