
genewise output
Score 94.28 bits over entire alignment
Scores as bits over a synchronous coding model

Warning: The bits scores is not probablistically correct for single seqs
See WWW help for more info

SPP00000022_1.0   70 EWQKKLTPEQFYVTREKGTEPPFSGIYLNNKEAGMYHCVCCDSPLFSSE 
                     EW+  LT  Q+ + R  GTE  +S +    +  G Y+C  C +PLF S+ 
                     EWKSTLTTRQYNILRTGGTEQQYSSVLEAEERTGTYNCAGCSTPLFLSK 
scaffold_21:sub10018 gtaaataacctaacaaggagcctttgcggggcagatatggtaacctcta 
                     agagctccgaaattgcggcaaaaccttacaagcgcaagcgggcctttca 
                     agataaagcaccttgttacagatatcaagaattagtttatttcaaccag 


SPP00000022_1.0  119 KKYCSGTGWPSFSEAHGTSGSDESHTGILRRLDTSLGSARTEVVCKQCE 
                     +K+ SGTGWPSF+ A    G +     +L     +LG    EV CK C  
                     EKFHSGTGWPSFASA--LVGVEVEKKNMLA---ATLGG--SEVRCKNCG 
scaffold_21:sub10165 gatcagagtcatgag  tggggggaaaatg   gatgg  tggctaatg 
                     aataggcggcgtcgc  ttgtataaaattc   cctgg  catggaagg 
                     aactctctgattact  attagaaaatgaa   tcaaa  taattgttt 


SPP00000022_1.0  168 AHLGHVFPDG---PG----PNGQRFCINSVALKFKP              
                      H+G +F DG   PG      G+RFCI+ VAL FKP              
                     GHMGDLFNDGYIFPGTPAEKTGKRFCIDGVALNFKP              
scaffold_21:sub10291 gcaggttaggtatcgacggaagaattaggggtatac              
                     gatgattaagattcgcccaacgagtgtagtctatac              
                     acgacactcccctttataaataagttttcagattgg              


//
>scaffold_21:subseq(161411,181411).pep
EWKSTLTTRQYNILRTGGTEQQYSSVLEAEERTGTYNCAGCSTPLFLSKEKFHSGTGWPS
FASALVGVEVEKKNMLAATLGGSEVRCKNCGGHMGDLFNDGYIFPGTPAEKTGKRFCIDG
VALNFKP
//
scaffold_21:subseq(161411,181411)	GeneWise	match	10018	10398	103.26	+	.	scaffold_21:subseq(161411,181411)-genewise-prediction-1
scaffold_21:subseq(161411,181411)	GeneWise	cds	10018	10398	0.00	+	0	scaffold_21:subseq(161411,181411)-genewise-prediction-1
//

genewise output
Score 21.59 bits over entire alignment
Scores as bits over a synchronous coding model

Warning: The bits scores is not probablistically correct for single seqs
See WWW help for more info

SPP00000022_1.0  122 CSGTGWPSFSEAHGT                                   
                     C+G GW  ++  HGT                                   
                     CNGIGWKKINNIHGT                                   
scaffold_21:s-179235 tagagtaaaaaacga                                   
                     gagtggaataatagc                                   
                     ttgcagaatttttta                                   


//
>scaffold_21:subseq(161411,181411).pep
CNGIGWKKINNIHGT
//
scaffold_21:subseq(161411,181411)	GeneWise	match	179235	179191	21.59	-	.	scaffold_21:subseq(161411,181411)-genewise-prediction-1
scaffold_21:subseq(161411,181411)	GeneWise	cds	179235	179191	0.00	-	0	scaffold_21:subseq(161411,181411)-genewise-prediction-1
//
