
genewise output
Score 81.48 bits over entire alignment
Scores as bits over a synchronous coding model

Warning: The bits scores is not probablistically correct for single seqs
See WWW help for more info

SPP00000022_1.0   68 KSEWQKKLTPEQFYVTREKGTEPPFSGIYLNNKEAGMYHCVCCDSPLFS 
                     ++EW+  LTP Q+ + REKGT+P   G Y +  E G Y C  C +PL++ 
                     EAEWKAILTPTQYRILREKGTDP-VGGKYDDLFEDGEYVCAACKTPLYT 
Cf_Contig980:su 4742 gggtagacacactcaccgagagc gggatggctggggtgtggtaaccta 
                     acagacttcccaagttgaagcac tggaaaattaagaatgccgacctac 
                     ggggagccccggcctgcgacgtg cgagctcctgccgcgtggcggaccg 


SPP00000022_1.0  117 SEKKYCSGTGWPSFSEAHGTSGSDESHTGILRRLDTSLGSARTEVVCKQ 
                     S  K+  G GWP F +    +          R L    G  R E+VC   
                     SAMKFACGCGWPGFWDCIPKT---------VRELPDKDG-RRVEIVCNA 
Cf_Contig980:su 4886 tgaatgtgtgtcgttgtacaa         gcgccgagg ccggagtag 
                     cctatcgggggcgtgagtcac         tgatcaaag ggtattgac 
                     ccggtccatgggacgcccggg         gggggtgcc cctatgccg 


SPP00000022_1.0  166 CEAHLGHVFPD----GPGPNGQRFCINSVALKFKP               
                     C +HLGHVF +     P PN  R C+N+ ++ F P               
                     CNSHLGHVFRNEGFRNPPPN-ERHCVNNTSVIFIP               
Cf_Contig980:su 5003 taaccgcgtcaggtcaccca gcctgaaatgatac               
                     gagatgattgaagtgaccca agagtaaccttttc               
                     cctcctcccctgccgtcggc gcccccctcaccta               


//
>Cf_Contig980:subseq(0,14742).pep
EAEWKAILTPTQYRILREKGTDPVGGKYDDLFEDGEYVCAACKTPLYTSAMKFACGCGWP
GFWDCIPKTVRELPDKDGRRVEIVCNACNSHLGHVFRNEGFRNPPPNERHCVNNTSVIFI
P
//
Cf_Contig980:subseq(0,14742)	GeneWise	match	4742	5104	92.46	+	.	Cf_Contig980:subseq(0,14742)-genewise-prediction-1
Cf_Contig980:subseq(0,14742)	GeneWise	cds	4742	5104	0.00	+	0	Cf_Contig980:subseq(0,14742)-genewise-prediction-1
//

genewise output
Score 22.26 bits over entire alignment
Scores as bits over a synchronous coding model

Warning: The bits scores is not probablistically correct for single seqs
See WWW help for more info

SPP00000022_1.0   38 VRGQAGGGGPG                                       
                     VRG+AGGGG G                                       
                     VRGEAGGGGAG                                       
Cf_Contig980:su-1638 gcggggggggg                                       
                     tggacggggcg                                       
                     ctcgaccatac                                       


//
>Cf_Contig980:subseq(0,14742).pep
VRGEAGGGGAG
//
Cf_Contig980:subseq(0,14742)	GeneWise	match	1638	1606	22.26	-	.	Cf_Contig980:subseq(0,14742)-genewise-prediction-1
Cf_Contig980:subseq(0,14742)	GeneWise	cds	1638	1606	0.00	-	0	Cf_Contig980:subseq(0,14742)-genewise-prediction-1
//
