
genewise output
Score 49.72 bits over entire alignment
Scores as bits over a synchronous coding model

Warning: The bits scores is not probablistically correct for single seqs
See WWW help for more info

SPP00000021_1.0   11 VFQNHFEPGVYVCAKCGYELFSSRSKYAHSSPWPAFTETIHADSVAKRP 
                     +F  HFE G Y CA C   L++S  K+  S  WPAF + +    V + P 
                     IFNEHFEAGTYHCAACRSLLYTSAMKFPCSCGWPAFYDCVPL-AVLEVP 
T.congo.pschr.110000 atagctgggatctggtcttctatgaatctatgtcgttgtgcc ggcggc 
                     ttaaatacgcaagccggcttaccctatcgggggcctaagtct cttatc 
                     cctgtcggtgcctaccgggttgacggtactccgggtcccggt gccggc 


SPP00000021_1.0   60 EHNRSEALKVSCGKCGNGLGHEFLNDG--PKPGQSRFUIFSSSLKFVP  
                     + +     ++ C  C   LGH F  +G    P   R  +  SSL F P  
                     DSD-GVRTEILCNACRGHLGHVFRGEGFGNPPPNERHCVNGSSLVFQP  
T.congo.pschr.110144 gag ggcagattagtcgctgcgtcgggtgacccagactgagttcgtcc  
                     aga gtgcattgacgggatgattggagtgacccaagagtagcctttac  
                     cct gccagtgtcgccgcgtcatctattccagctaattgttttctcgg  


//
>T.congo.pschr.11:subseq(3348496,1449300).pep
IFNEHFEAGTYHCAACRSLLYTSAMKFPCSCGWPAFYDCVPLAVLEVPDSDGVRTEILCN
ACRGHLGHVFRGEGFGNPPPNERHCVNGSSLVFQP
//
T.congo.pschr.11:subseq(3348496,1449300)	GeneWise	match	10000	10284	50.72	+	.	T.congo.pschr.11:subseq(3348496,1449300)-genewise-prediction-1
T.congo.pschr.11:subseq(3348496,1449300)	GeneWise	cds	10000	10284	0.00	+	0	T.congo.pschr.11:subseq(3348496,1449300)-genewise-prediction-1
//

genewise output
Score 20.42 bits over entire alignment
Scores as bits over a synchronous coding model

Warning: The bits scores is not probablistically correct for single seqs
See WWW help for more info

SPP00000021_1.0   37 YAHSSPWPAFTETI                                    
                     Y+H  PWP  T  +                                    
                     YSHEEPWPCSTSCL                                    
T.congo.pschr-638186 ttcggctcttattc                                    
                     acaaacgcgcccgt                                    
                     cataatgctcgttg                                    


//
>T.congo.pschr.11:subseq(3348496,1449300).pep
YSHEEPWPCSTSCL
//
T.congo.pschr.11:subseq(3348496,1449300)	GeneWise	match	638186	638145	20.42	-	.	T.congo.pschr.11:subseq(3348496,1449300)-genewise-prediction-1
T.congo.pschr.11:subseq(3348496,1449300)	GeneWise	cds	638186	638145	0.00	-	0	T.congo.pschr.11:subseq(3348496,1449300)-genewise-prediction-1
//
