
genewise output
Score 42.39 bits over entire alignment
Scores as bits over a synchronous coding model

Warning: The bits scores is not probablistically correct for single seqs
See WWW help for more info

SPP00000021_1.0    9 GEVFQNHFEPGVYVCAKCGYELFSSRSKYAHSSPWPAFTETIHADSVAK 
                     G  + + F+ G YVCA C   L+ S  K+A    WP F + I    V + 
                     GGKYDDVFDEGEYVCAGCKTPLYLSSMKFACGCGWPGFYDCI-PKRVRE 
contig_28:subse10000 ggatgggtggggtgtggtaacctcttaatgtgtgtcgttgta cacgcg 
                     ggaaaattaagaatgcggacctatcctatcgggggcgtaagt cagtga 
                     tggccccccgggcgccgcgggtcgccgacccctcgcgtcccc agggcg 


SPP00000021_1.0   58 RPEHNRSEALKVSCGKCGNGLGHEFLNDGPK--PGQSRFUIFSSSLKFV 
                     +P+ +    +++ C  C + LGH F  +G +  P   R  + S+S+ +  
                     QPDKD-GRRVEIVCNACNSHLGHVFRKEGFRNPPPNERHCVNSTSIILR 
contig_28:subse10144 ccgag gccggagtagtaaccgcgtcaggtcacccagcctgaaataacc 
                     acaaa gggtattgacgagatgattgaagtgacccaagagtagcctttg 
                     ggcgc cctcgtcccgcccccgccctggccacaagcggccgcccccaga 


SPP00000021_1.0  105 P                                                 
                     P                                                 
                     P                                                 
contig_28:subse10288 c                                                 
                     c                                                 
                     c                                                 


//
>contig_28:subseq(1044345,127380).pep
GGKYDDVFDEGEYVCAGCKTPLYLSSMKFACGCGWPGFYDCIPKRVREQPDKDGRRVEIV
CNACNSHLGHVFRKEGFRNPPPNERHCVNSTSIILRP
//
contig_28:subseq(1044345,127380)	GeneWise	match	10000	10290	43.38	+	.	contig_28:subseq(1044345,127380)-genewise-prediction-1
contig_28:subseq(1044345,127380)	GeneWise	cds	10000	10290	0.00	+	0	contig_28:subseq(1044345,127380)-genewise-prediction-1
//

genewise output
Score 17.79 bits over entire alignment
Scores as bits over a synchronous coding model

Warning: The bits scores is not probablistically correct for single seqs
See WWW help for more info

SPP00000021_1.0    3 FCSFFGGEVFQNH---FEPGVYV                           
                     FCS  G EV  N    F PGV++                           
                     FCSPVGEEVPHNDVPIFRPGVFI                           
contig_28:subs-53614 ttacgggggccaggcatccggta                           
                     tggctgaatcaaatcttgcgttt                           
                     ctcctaagtacttcccccccccc                           


//
>contig_28:subseq(1044345,127380).pep
FCSPVGEEVPHNDVPIFRPGVFI
//
contig_28:subseq(1044345,127380)	GeneWise	match	53614	53546	19.79	-	.	contig_28:subseq(1044345,127380)-genewise-prediction-1
contig_28:subseq(1044345,127380)	GeneWise	cds	53614	53546	0.00	-	0	contig_28:subseq(1044345,127380)-genewise-prediction-1
//
