Command line: [exonerate -m p2g -q querysX/X_selR_elegans.fa -t subseq/subseq.selR_elegans.fa.CONTRA.Leishmania_donovani_BPK282A1.fa]
Hostname: [luke]

C4 Alignment:
------------
         Query: SPP00000059_1.0 # Protein # Selenoprotein R  (SelR) # Caenorhabditis elegans # Complete
        Target: contig_28:subseq(1044261,127464)
         Model: protein2genome:local
     Raw score: 178
   Query range: 22 -> 143
  Target range: 9999 -> 10353

    23 : LysAspValLysGlnThrGluTrpLysSerValLeuProAsnGluValTyrArgValAla :    42
         ||||||:!!!...!.  !||||||!:! !!:!!||| !!   :!!! !|||!.!:!!  !
         LysAspMetSerAspGluGluTrpArgArgIleLeuThrAlaGlnGluTyrHisIleLeu
 10000 : AAGGATATGAGCGATGAAGAGTGGAGGCGTATCCTCACAGCACAGGAGTACCATATTCTG : 10057

    43 : ArgGluSerGlyThrGluThrProHisThrGlyGlyPheAsnAspHisPheGluLysGly :    62
         ||||||!.!||||||!!:   |||  !  !|||  !!:!:!!|||  !|||!!::!!|||
         ArgGluLysGlyThrAsp---ProValGlyGlyLysTyrAspAspValPheAspGluGly
 10058 : CGTGAGAAGGGCACTGAC---CCCGTCGGTGGGAAGTACGACGACGTCTTCGACGAGGGG : 10114

    63 : ArgTyrValCysLeuCysCysGlySerGluLeuPheAsnSerAspAlaLysPheTrpAla :    82
         ..!|||||||||  ! ! |||  !!!!  !|||!:!   |||..!  !||||||   ..!
         GluTyrValCysAlaGlyCysLysThrProLeuTyrLeuSerSerMetLysPheAlaCys
 10115 : GAGTACGTGTGCGCCGGGTGCAAGACGCCGCTTTACCTGTCCTCCATGAAATTCGCCTGC : 10174

    83 : GlyCysGlyTrpProAlaPheSerGluSerValGlyGlnAspAlaAsnIleValArgIle :   102
         |||||||||||||||!.!|||! !!!:!!!:!!  !:!!            ||||||   
         GlyCysGlyTrpProGlyPheTyrAspCysIleProLysArg---------ValArgGlu
 10175 : GGCTGTGGCTGGCCCGGGTTTTACGACTGCATCCCAAAGCGG---------GTGCGCGAG : 10225

   103 : ValAspArgSerHisGlyMetHisArgThrGluValArgCysLysThrCysAspAlaHis :   122
           !     !!.! !!|||   !.!|||..!|||:!!  !|||!!..!!|||:!!::!|||
         GlnProAspLysAspGly---ArgArgValGluIleValCysAsnAlaCysAsnSerHis
 10226 : CAGCCGGACAAGGACGGC---CGCCGTGTCGAGATTGTCTGCAACGCGTGCAACAGCCAC : 10282

   123 : LeuGlyHisValPhe<->AsnAspGlyProLysGlu<->ThrThrGlyGluArgTyrCys :   140
         |||||||||||||||   !!.!!:|||  !::!.!.    !! !!..!||||||:!!|||
         LeuGlyHisValPheArgLysGluGlyPheArgAsnProProProAsnGluArgHisCys
 10283 : CTCGGGCACGTCTTCCGTAAGGAGGGCTTCCGAAACCCACCACCGAACGAGCGGCACTGC : 10342

   141 : IleAsnSer :   143
         :!:||||||
         ValAsnSer
 10343 : GTGAACAGC : 10353

vulgar: SPP00000059_1.0 22 143 . contig_28:subseq(1044261,127464) 9999 10353 + 178 M 26 78 G 1 0 M 47 141 G 3 0 M 9 27 G 1 0 M 18 54 G 0 3 M 6 18 G 0 3 M 10 30
-- completed exonerate analysis
