Command line: [exonerate -m p2g -q querysX/X_selR_elegans.fa -t subseq/subseq.selR_elegans.fa.CONTRA.Albugo_laibachii_Nc14.fa]
Hostname: [luke]

C4 Alignment:
------------
         Query: SPP00000059_1.0 # Protein # Selenoprotein R  (SelR) # Caenorhabditis elegans # Complete
        Target: gi|325181427|emb|FR824061.1|:subseq(79428,99428) Albugo laibachii Nc14, genomic contig CONTIG_16_NC14_v4_210924_216
         Model: protein2genome:local
     Raw score: 168
   Query range: 18 -> 111
  Target range: 9682 -> 10223

    19 : GluLysAsnProLysAspValLysGlnThrGluTrpLysSerValLeuProAsnGluVal :    38
         :!!:!!:!!  !|||     !! !.!.! !|||||||||.!!  !|||  !   |||  !
         LysGluAspValLysProTrpThrAspLysGluTrpLysGlyArgLeuAsnProGluGln
  9683 : AAGGAAGATGTGAAACCATGGACGGACAAGGAGTGGAAAGGACGGCTCAATCCAGAGCAA :  9740

    39 : TyrArgValAlaArgGluSerGlyThrGluThrProHisThrGlyGlyPheAsnAspHis :    58
         |||||||||  !|||  !!.!|||||||||  ! !!  !!:!|||!.!!:!||| !   !
         TyrArgValLeuArgLeuLysGlyThrGluLeuAlaGlySerGlyAlaTyrAsnLysPhe
  9741 : TACCGCGTTCTTCGTCTGAAAGGAACAGAACTTGCTGGCAGTGGCGCCTACAATAAGTTT :  9800

    59 : PheGluLysGlyArgTyrValCysLeuCysCysGlySerGluLeuPheAsnSerAspAla :    78
         !:!|||:!!|||! !|||:!!|||  ! !!|||  !:!!  !:!!!:!!..||| ! .!!
         TyrGluGluGlyThrTyrLeuCysAlaGlyCysLysAlaProValTyrThrSerLysThr
  9801 : TATGAAGAGGGTACCTATCTATGTGCTGGTTGCAAAGCACCGGTGTATACGTCCAAGACC :  9860

    79 : LysPheTrpAlaGlyCysGlyTrpProAlaPheSerGluSerValGlyGlnAsp{Al}   :    97
         ||||||   :!!|||||||||||||||||||||! !!!::!!|||  !.!.! !{  }  
         LysPheAspSerGlyCysGlyTrpProAlaPheTyrAspAlaValProAsnAla{Me}--
  9861 : AAATTTGATTCCGGTTGTGGCTGGCCAGCGTTTTACGATGCCGTTCCAAACGCC{AT}ca :  9919

    98 : >>>> Target Intron 1 >>>>  {a}AsnIleValArgIleValAspArgSerHis :   107
                   262 bp           {!}!..|||:!!|||:!!||||||||| !! !!
                                  ++{t}ArgIleIleArgValValAspArgProAsp
  9920 : .........................ag{G}AGAATTATCCGAGTCGTAGACCGGCCTGAC : 10209

   108 : GlyMetHisArg :   111
         ..!   !!.|||
         SerCysGlnArg
 10210 : TCCTGTCAGCGA : 10223

vulgar: SPP00000059_1.0 18 111 . gi|325181427|emb|FR824061.1|:subseq(79428,99428) 9682 10223 + 168 M 78 234 S 0 2 5 0 2 I 0 258 3 0 2 S 1 1 M 14 42
-- completed exonerate analysis
