Command line: [exonerate -m p2g -q querysX/X_selR_cerevisiae.fa -t subseq/subseq.selR_cerevisiae.fa.CONTRA.Crithidia_fasciculata.fa]
Hostname: [luke]

C4 Alignment:
------------
         Query: SPP00000077_1.0 # Protein # Selenoprotein R  (SelR) # Saccharomyces cerevisiae # Complete
        Target: Cf_Contig980:subseq(0,14727)  |  | 1 to 109705
         Model: protein2genome:local
     Raw score: 200
   Query range: 34 -> 163
  Target range: 4726 -> 5092

   35 : SerAspGluSerAsnAspValLysTrpAsnAspAlaLeuThrProLeuGlnLeuMetValLe :   55
        ||| ! !!:!.!   !!:!.!:!!|||!!.!    !|||||||||  !|||! !   :!!||
        SerLysAspLysProGluAlaGluTrpLysAlaIleLeuThrProThrGlnTyrArgIleLe
 4727 : TCGAAGGACAAGCCGGAGGCGGAGTGGAAAGCGATCCTCACCCCCACGCAGTACCGCATTCT : 4787

   56 : uArgAspLysAlaThrGluArgProAsnThrGlyAlaTyrLeuHisThrAsnGluSerGlyV :   76
        ||||!!:|||!.!|||!!:   |||  !  !|||  !|||  ! !!  !  !|||..!|||!
        uArgGluLysGlyThrAsp---ProValGlyGlyLysTyrAspAspLeuPheGluAspGlyG
 4788 : GCGCGAGAAAGGCACGGAT---CCGGTCGGGGGAAAGTACGATGACCTCTTTGAGGACGGCG : 4847

   77 : alTyrHisCysAlaAsnCysAspArgProLeuTyrSerSerLysAlaLysPheAspAlaArg :   96
         !|||   ||||||   ||| ! ! !|||||||||!!!|||     !||||||! !..! !!
        luTyrValCysAlaAlaCysLysThrProLeuTyrThrSerAlaMetLysPheAlaCysGly
 4848 : AGTACGTGTGTGCGGCGTGCAAGACGCCACTCTACACGTCCGCCATGAAGTTTGCCTGCGGA : 4907

   97 : CysGlyTrpProAlaPheTyrGluGluValSerProGlyAlaIleThrTyrHisArgAspAs :  117
        ||||||||||||!.!|||!::!!:   :!!   |||  !.!!:!:  ! ! !  ! !|||!!
        CysGlyTrpProGlyPheTrpAspCysIle---ProLysThrValArgGluLeuProAspLy
 4908 : TGTGGGTGGCCGGGATTCTGGGACTGCATC---CCGAAGACGGTGCGGGAGCTGCCGGATAA : 4967

  118 : nSerLeuMetProAlaArgValGluIleCysCysAlaArgCysGlyGlyHisLeuGlyHisV :  138
        ...!        !  !||||||||||||   |||  !  !|||..!.!!|||||||||||||
        sAsp------GlyArgArgValGluIleValCysAsnAlaCysAsnSerHisLeuGlyHisV
 4968 : GGAC------GGCCGCCGCGTTGAAATTGTGTGCAACGCGTGCAACAGTCACCTCGGTCACG : 5024

  139 : alPheGluGlyGluGlyTrpLysGlnLeuLeuAsnLeuProLysAspThrArgHisCysVal :  158
        |||||.....!||||||!::::!         |||! !|||  !:!!  !||||||||||||
        alPheArgAsnGluGlyPheArg---------AsnProProProAsnGluArgHisCysVal
 5025 : TCTTCCGCAATGAGGGCTTCCGG---------AATCCCCCGCCGAACGAGCGCCACTGCGTC : 5075

  159 : AsnSerAlaSerLeu :  163
        |||!:!.!!|||:!!
        AsnAsnThrSerVal
 5076 : AACAACACTTCCGTA : 5092

vulgar: SPP00000077_1.0 34 163 . Cf_Contig980:subseq(0,14727) 4726 5092 + 200 M 27 81 G 1 0 M 44 132 G 1 0 M 11 33 G 2 0 M 25 75 G 3 0 M 15 45
-- completed exonerate analysis
