Command line: [exonerate -m p2g -q querysX/X_selR3_human.fa -t subseq/subseq.selR3_human.fa.CONTRA.Trypanosoma_congolense.fa]
Hostname: [luke]

C4 Alignment:
------------
         Query: SPP00000023_1.0 # Protein # Methionine-R-sufoxide reductase 3 (SelR3) # Homo sapiens # Complete
        Target: T.congo.pschr.11:subseq(3348430,1449366)
         Model: protein2genome:local
     Raw score: 167
   Query range: 50 -> 169
  Target range: 9999 -> 10353

    51 : ArgLysArgLeuThrProLeuGlnTyrHisValThrGlnGluLysGlyThrGluSerAla :    70
         |||:!!!:!|||||||||! !|||!:!!.!|||  !!:::!!|||!.!|||!!: !! !!
         ArgGluLysLeuThrProGlnGlnPheArgValLeuArgGlnLysAlaThrAspProPro
 10000 : AGGGAAAAGTTAACTCCGCAACAGTTCCGTGTGCTTCGTCAGAAGGCGACGGACCCGCCG : 10057

    71 : PheGluGlyGluTyrThrHisHisLysAspProGlyIleTyrLysCysValValCysGly :    90
         |||   |||   !:!!.!.!.|||   !!: !!|||!  ||| ! |||!.!!.!||| !!
         Phe---GlyIlePheAsnGluHisPheGluAlaGlyThrTyrHisCysAlaAlaCysArg
 10058 : TTC---GGGATCTTCAATGAGCATTTCGAGGCGGGTACGTACCACTGTGCAGCCTGCCGG : 10114

    91 : ThrProLeuPheLysSerGluThrLysPheAspSerGlySerGlyTrpProSerPheHis :   110
         :!!  !|||!:!! !|||!  ! !||||||   !!!.!!!!!|||||||||:!!|||:!!
         SerLeuLeuTyrThrSerAlaMetLysPheProCysSerCysGlyTrpProAlaPheTyr
 10115 : TCGTTGCTTTATACGTCAGCCATGAAGTTTCCATGCAGTTGCGGCTGGCCGGCGTTTTAC : 10174

   111 : AspValIleAsnSerGluAlaIleThrPheThrAspAspPheSerTyrGlyMetHisArg :   130
         |||  !:!:     !! !!.!:!!  ! !  !!|||      ||| !!|||:!:   |||
         AspCysValProLeuAlaValLeuGluValProAsp------SerAspGlyVal---Arg
 10175 : GACTGCGTGCCGCTTGCGGTCCTCGAGGTGCCCGAC------AGCGATGGGGTC---CGC : 10225

   131 : ValGluThrSerCysSerGlnCysGlyAlaHisLeuGlyHisIlePheAspAsp<-><-> :   149
         ..!|||! !! !|||!:!  !||| !!!.!||||||||||||:!!|||  !! !      
         ThrGluIleLeuCysAsnAlaCysArgGlyHisLeuGlyHisValPheArgGlyGluGly
 10226 : ACAGAGATTTTGTGTAACGCGTGCCGCGGGCACTTGGGTCACGTATTTCGCGGTGAAGGT : 10285

   150 : <->GlyProArgProThrGlyLysArgTyrCysIleAsnSerAlaAlaLeuSerPheThr :   167
            |||  !! !||| !!..!:!!|||:!!|||:!:|||.!!:!!:!!|||  !|||  !
         PheGlyAsnProProProAsnGluArgHisCysValAsnGlySerSerLeuValPheGln
 10286 : TTTGGCAACCCACCGCCCAATGAAAGACATTGTGTGAATGGTTCTTCTCTCGTTTTCCAG : 10345

   168 : ProAla :   169
         ||||||
         ProAla
 10346 : CCGGCG : 10353

vulgar: SPP00000023_1.0 50 169 . T.congo.pschr.11:subseq(3348430,1449366) 9999 10353 + 167 M 21 63 G 1 0 M 50 150 G 2 0 M 4 12 G 1 0 M 19 57 G 0 9 M 21 63
-- completed exonerate analysis
