Command line: [exonerate -m p2g -q querysX/X_selR3_human.fa -t subseq/subseq.selR3_human.fa.CONTRA.Leishmania_tarentolae.fa]
Hostname: [luke]

C4 Alignment:
------------
         Query: SPP00000023_1.0 # Protein # Methionine-R-sufoxide reductase 3 (SelR3) # Homo sapiens # Complete
        Target: Lt_contig5668  |  | 1 to 2542:[revcomp]
         Model: protein2genome:local
     Raw score: 177
   Query range: 45 -> 172
  Target range: 1483 -> 1105

   46 : SerGlnGlnGluLeuArgLysArgLeuThrProLeuGlnTyrHisValThrGlnGluLysGl :   66
        |||.!.   |||! !|||:::  !|||||| !!! !:!!||||||:!!  !!::||||||||
        SerAspAlaGluTrpArgArgValLeuThrAlaHisGluTyrHisIleLeuArgGluLysGl
 1483 : AGCGATGCCGAGTGGAGGCGTGTCCTCACCGCGCACGAGTACCATATTCTGCGCGAGAAGGG : 1423

   67 : yThrGluSerAlaPheGluGlyGluTyrThrHisHisLysAspProGlyIleTyrLysCysV :   87
        ||||!!: !!!.!   ! !|||:!!|||  !.!.  !   |||  !|||   |||  !|||!
        yThrAspProVal---GlyGlyLysTyrAspGluValPheAspGluGlyGluTyrValCysA
 1422 : CACTGACCCTGTC---GGGGGCAAGTACGACGAAGTCTTCGATGAGGGGGAGTACGTGTGCG : 1363

   88 : alValCysGlyThrProLeuPheLysSerGluThrLysPheAspSerGlySerGlyTrpPro :  107
        .!! !|||  !|||||||||!:!   |||...! !||||||! !!!!|||!!!|||||||||
        laGlyCysGlnThrProLeuTyrLeuSerSerMetLysPheAlaCysGlyCysGlyTrpPro
 1362 : CCGGGTGCCAGACACCGCTGTACCTCTCCTCCATGAAATTTGCCTGCGGCTGTGGATGGCCT : 1303

  108 : SerPheHisAspValIleAsnSerGluAlaIleThrPheThrAspAspPheSerTyrGlyMe :  128
        .!!|||:!!|||  !|||   !.!:!!!.!  !  !    !!||| !   !.!!        
        GlyPheTyrAspCysIleProLysLysValArgGluGlnProAspLysAspGly--------
 1302 : GGGTTTTACGACTGCATCCCAAAGAAGGTGCGCGAGCAGCCGGACAAGGATGGC-------- : 1246

  129 : tHisArgValGluThrSerCysSerGlnCysGlyAlaHisLeuGlyHisIlePhe<-><->A :  147
         !..|||||||||! !  !|||!:!  !|||..!::!||||||||||||||||||      !
        -ArgArgValGluIleValCysAsnAlaCysAsnSerHisLeuGlyHisIlePheArgGlyG
 1245 : -CGACGTGTTGAGATCGTCTGCAACGCGTGCAATAGCCACCTTGGTCATATCTTCCGCGGGG : 1186

  148 : spAspGlyProArg<->ProThrGlyLysArgTyrCysIleAsnSerAlaAlaLeuSerPhe :  166
        !:!    !|||!.!   ||| !!..!:!!|||:!!|||:!:||||||.!!:!!:!!! !.!.
        luGlyPheProAsnProProProAsnGluArgHisCysValAsnSerThrSerIleIleLeu
 1185 : AGGGATTCCCCAACCCACCACCCAACGAACGGCACTGCGTGAACAGCACCTCTATTATACTG : 1126

  167 : ThrProAlaAspSerSer :  172
          !|||.!!.!.!.!|||
        ArgProThrGlnLysSer
 1125 : CGTCCTACGCAGAAGTCG : 1106

vulgar: SPP00000023_1.0 45 172 . Lt_contig5668 1483 1105 - 177 M 25 75 G 1 0 M 54 162 G 3 0 M 18 54 G 0 6 M 5 15 G 0 3 M 21 63
-- completed exonerate analysis
