Command line: [exonerate -m p2g -q querysX/X_selR3_human.fa -t subseq/subseq.selR3_human.fa.CONTRA.Crithidia_fasciculata.fa]
Hostname: [luke]

C4 Alignment:
------------
         Query: SPP00000023_1.0 # Protein # Methionine-R-sufoxide reductase 3 (SelR3) # Homo sapiens # Complete
        Target: Cf_Contig980:subseq(0,14742)  |  | 1 to 109705
         Model: protein2genome:local
     Raw score: 175
   Query range: 46 -> 169
  Target range: 4741 -> 5107

   47 : GlnGlnGluLeuArgLysArgLeuThrProLeuGlnTyrHisValThrGlnGluLysGlyTh :   67
        :!!  !|||! !!:!  !! !|||||||||  !||||||!.!:!!  !!::|||||||||||
        GluAlaGluTrpLysAlaIleLeuThrProThrGlnTyrArgIleLeuArgGluLysGlyTh
 4742 : GAGGCGGAGTGGAAAGCGATCCTCACCCCCACGCAGTACCGCATTCTGCGCGAGAAAGGCAC : 4802

   68 : rGluSerAlaPheGluGlyGluTyrThrHisHisLysAspProGlyIleTyrLysCysValV :   88
        |!!: !!!.!   ! !|||:!!|||  ! !!! !   !!:  !|||   |||  !|||!.!!
        rAspProVal---GlyGlyLysTyrAspAspLeuPheGluAspGlyGluTyrValCysAlaA
 4803 : GGATCCGGTC---GGGGGAAAGTACGATGACCTCTTTGAGGACGGCGAGTACGTGTGTGCGG : 4862

   89 : alCysGlyThrProLeuPheLysSerGluThrLysPheAspSerGlySerGlyTrpProSer :  108
        .!|||  !|||||||||!:!! !|||!  ! !||||||! !!!!|||!!!|||||||||.!!
        laCysLysThrProLeuTyrThrSerAlaMetLysPheAlaCysGlyCysGlyTrpProGly
 4863 : CGTGCAAGACGCCACTCTACACGTCCGCCATGAAGTTTGCCTGCGGATGTGGGTGGCCGGGA : 4922

  109 : PheHisAspValIleAsnSerGluAlaIleThrPheThrAspAspPheSerTyrGlyMetHi :  129
        |||   |||  !|||   !.!  !!.!     !.!. !!||| !   !.!!         !.
        PheTrpAspCysIleProLysThrValArgGluLeuProAspLysAspGly---------Ar
 4923 : TTCTGGGACTGCATCCCGAAGACGGTGCGGGAGCTGCCGGATAAGGACGGC---------CG : 4976

  130 : sArgValGluThrSerCysSerGlnCysGlyAlaHisLeuGlyHisIlePhe<->AspAspG :  149
        !|||||||||! !  !|||!:!  !|||..!::!||||||||||||:!!|||   :!!!!:|
        gArgValGluIleValCysAsnAlaCysAsnSerHisLeuGlyHisValPheArgAsnGluG
 4977 : CCGCGTTGAAATTGTGTGCAACGCGTGCAACAGTCACCTCGGTCACGTCTTCCGCAATGAGG : 5039

  150 : lyProArg<-><->ProThrGlyLysArgTyrCysIleAsnSerAlaAlaLeuSerPheThr :  167
        ||  !|||      ||| !!..!:!!|||:!!|||:!!|||!:!.!!:!!:!!! !|||! !
        lyPheArgAsnProProProAsnGluArgHisCysValAsnAsnThrSerValIlePheIle
 5040 : GCTTCCGGAATCCCCCGCCGAACGAGCGCCACTGCGTCAACAACACTTCCGTAATCTTCATT : 5099

  168 : ProAla :  169
        ||||||
        ProAla
 5100 : CCAGCG : 5107

vulgar: SPP00000023_1.0 46 169 . Cf_Contig980:subseq(0,14742) 4741 5107 + 175 M 24 72 G 1 0 M 54 162 G 3 0 M 18 54 G 0 3 M 5 15 G 0 6 M 18 54
-- completed exonerate analysis
