TBLASTN 2.2.13 [Nov-27-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= SPP00000022_1.0 # Protein # Methionine-R-sufoxide reductase 2 (SelR2) # Homo sapiens # Complete (199 letters) Database: F.cylindrus/genome.fa 271 sequences; 80,540,407 total letters Searching......................................................done Score E Sequences producing significant alignments: (bits) Value scaffold_65 98 1e-20 scaffold_21 98 1e-20 scaffold_1 87 2e-17 scaffold_33 84 1e-16 scaffold_20 84 1e-16 scaffold_7 68 1e-11 >scaffold_65 Length = 283846 Score = 97.8 bits (242), Expect = 1e-20 Identities = 56/140 (40%), Positives = 77/140 (55%), Gaps = 7/140 (5%) Frame = +2 Query: 64 LPLAKSEWQKKLTPEQFYVTREKGTEPPFSGIYLNNKEAGMYHCVCCDSPLFSSEKKYCS 123 L + EW+ LT Q+ + R GTE +S + + G Y+C C +PLF S++K+ S Sbjct: 16010 LQKSDDEWKSTLTTRQYNILRTGGTEQQYSSVLEAEERTGTYNCAGCSTPLFLSKEKFHS 16189 Query: 124 GTGWPSFSEAHGTSGSDESHTGILRRLDTSLGSARTEVVCKQCEAHLGHVFPDG---PG- 179 GTGWPSF+ A G + +L +LG +EV CK C H+G +F DG PG Sbjct: 16190 GTGWPSFASA--LVGVEVEKKNMLA---ATLGG--SEVRCKNCGGHMGDLFNDGYIFPGT 16348 Query: 180 ---PNGQRFCINSVALKFKP 196 G+RFCI+ VAL FKP Sbjct: 16349 PAEKTGKRFCIDGVALNFKP 16408 >scaffold_21 Length = 951085 Score = 97.8 bits (242), Expect = 1e-20 Identities = 56/140 (40%), Positives = 77/140 (55%), Gaps = 7/140 (5%) Frame = +3 Query: 64 LPLAKSEWQKKLTPEQFYVTREKGTEPPFSGIYLNNKEAGMYHCVCCDSPLFSSEKKYCS 123 L + EW+ LT Q+ + R GTE +S + + G Y+C C +PLF S++K+ S Sbjct: 171411 LQKSDDEWKSTLTTRQYNILRTGGTEQQYSSVLEAEERTGTYNCAGCSTPLFLSKEKFHS 171590 Query: 124 GTGWPSFSEAHGTSGSDESHTGILRRLDTSLGSARTEVVCKQCEAHLGHVFPDG---PG- 179 GTGWPSF+ A G + +L +LG +EV CK C H+G +F DG PG Sbjct: 171591 GTGWPSFASA--LVGVEVEKKNMLA---ATLGG--SEVRCKNCGGHMGDLFNDGYIFPGT 171749 Query: 180 ---PNGQRFCINSVALKFKP 196 G+RFCI+ VAL FKP Sbjct: 171750 PAEKTGKRFCIDGVALNFKP 171809 >scaffold_1 Length = 5926375 Score = 86.7 bits (213), Expect = 2e-17 Identities = 53/140 (37%), Positives = 74/140 (52%), Gaps = 13/140 (9%) Frame = -2 Query: 70 EWQKKLTPEQFYVTREKGTEPPFSGI---YLNNKEAGMYHCVCCDSPLFSSEKKYCSGTG 126 EW L+ +Q+ V R+ GTE S I + + G Y C C++PLF+S K+ SGTG Sbjct: 4523973 EWSYILSGQQYNVLRQGGTERQKSSILNTFTSKDHVGTYVCAGCNTPLFTSASKFSSGTG 4523794 Query: 127 WPSFSEAH-GTSGSDESHTGI-LRRLDTSLGSAR-TEVVCKQCEAHLGHVFPDG------ 177 WPSF+ ++ G G G+ + +LD + EV C C HLG +F DG Sbjct: 4523793 WPSFAYSYTGIGGGGNEIGGVEIEQLDPIRSALNGREVRCNTCGGHLGDLFNDGYMYIGT 4523614 Query: 178 -PGPNGQRFCINSVALKFKP 196 +GQR+CI+ AL FKP Sbjct: 4523613 SAFDSGQRYCIDGSALIFKP 4523554 >scaffold_33 Length = 615088 Score = 84.3 bits (207), Expect = 1e-16 Identities = 50/112 (44%), Positives = 66/112 (58%), Gaps = 7/112 (6%) Frame = -1 Query: 70 EWQKKLTPEQFYVTREKGTEPPFSGIY------LNNKE-AGMYHCVCCDSPLFSSEKKYC 122 EW++ L+PEQ+Y+ R++GTE P S I N KE G + C C++ LF ++ K+ Sbjct: 334711 EWKEILSPEQYYILRKEGTESPNSSILNKISVEKNGKEDEGTFSCGGCNAALFVADAKFD 334532 Query: 123 SGTGWPSFSEAHGTSGSDESHTGILRRLDTSLGSARTEVVCKQCEAHLGHVF 174 SGTGWPSF A TS + + +T D L RTEV C QC HLGHVF Sbjct: 334531 SGTGWPSFF-APITSSAVDLNT------DYKLIVPRTEVTCSQCGGHLGHVF 334397 >scaffold_20 Length = 1108856 Score = 84.3 bits (207), Expect = 1e-16 Identities = 55/152 (36%), Positives = 76/152 (50%), Gaps = 25/152 (16%) Frame = +3 Query: 70 EWQKKLTPEQFYVTREKGTEPPFSGI---YLNNKEAGMYHCVCCDSPLFSSEKKYCSGTG 126 EW L+ +Q+ V R+ GTE S I + + G Y C C++PLF+SE K+ SGTG Sbjct: 194055 EWSYILSGQQYNVLRQGGTERQKSSILNTFTSKDHVGTYVCAGCNTPLFTSESKFSSGTG 194234 Query: 127 WPSF------------SEAHGTSGSDESHTG--ILRRLDTSLGSAR-TEVVCKQCEAHLG 171 WPSF +++ G SG + G + +LD + EV C C HLG Sbjct: 194235 WPSFAYSSTSTDSISNTKSDGGSGGGGNEIGGVEIEQLDPIRSALNGREVRCNTCGGHLG 194414 Query: 172 HVFPDG-------PGPNGQRFCINSVALKFKP 196 +F DG +GQR+CI+ AL FKP Sbjct: 194415 DLFNDGYMYIGTSAFDSGQRYCIDGSALIFKP 194510 >scaffold_7 Length = 2770240 Score = 67.8 bits (164), Expect = 1e-11 Identities = 48/158 (30%), Positives = 71/158 (44%), Gaps = 25/158 (15%) Frame = -2 Query: 63 ELPLAKSEWQKKLT--PEQFYVTREKGTEPPFSGIYLNNKEAGMYHCVCCDSPLFSSEKK 120 E P++ ++ ++ T P + V + TE F+ K G+Y+C CD LF S+ K Sbjct: 1122417 ENPMSTNDEIERRTWNPLRLMVLKLGFTELKFTSPLNYEKRDGLYNCAYCDLDLFDSDGK 1122238 Query: 121 YCSGTGWPSFSEAHGTSGSDESHTGILRRLDTSLGSARTEVVCKQCEAHLGHVFPDGPGP 180 Y +GWPSF + + + H + D R E C +C++HLGHVF DGP P Sbjct: 1122237 YEPNSGWPSFWRS-----TKDGHVTYKKEWD-----GRLEAKCGRCDSHLGHVFLDGPLP 1122088 Query: 181 ---------------------NG--QRFCINSVALKFK 195 NG RFC+N +L F+ Sbjct: 1122087 SKVEKDLLENAPASDPRGIRTNGYLPRFCMNGASLNFQ 1121974 Database: F.cylindrus/genome.fa Posted date: Nov 21, 2011 7:46 PM Number of letters in database: 80,540,407 Number of sequences in database: 271 Lambda K H 0.316 0.133 0.426 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 16,861,487 Number of Sequences: 271 Number of extensions: 262369 Number of successful extensions: 1705 Number of sequences better than 1.0e-04: 6 Number of HSP's better than 0.0 without gapping: 20 Number of HSP's successfully gapped in prelim test: 6 Number of HSP's that attempted gapping in prelim test: 1510 Number of HSP's gapped (non-prelim): 494 length of query: 199 length of database: 26,846,802 effective HSP length: 101 effective length of query: 98 effective length of database: 26,819,431 effective search space: 2628304238 effective search space used: 2628304238 frameshift window, decay const: 40, 0.1 T: 13 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.6 bits) S2: 104 (44.7 bits)